| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108758494
Identifier: 108758494
GI number: 108758494
Start: 6568611
End: 6570320
Strand: Direct
Name: 108758494
Synonym: MXAN_5269
Alternate gene names: NA
Gene position: 6568611-6570320 (Clockwise)
Preceding gene: 108757695
Following gene: 108760284
Centisome position: 71.87
GC content: 64.5
Gene sequence:
>1710_bases TTGGCGACCCGGAGTGCGTCTGGGCATGAACGAGCGCAATGGATCGCGAACAGACGCGGATCGCCGGCCATCGCATCGTC CACGACGCGCAATGCCAAGGAGCATTTCATGTCGAAATCGAATCAGTCCGCGCCGACCCTTTCTCGCCGCAGCCTGTTAC CAACACTCGCCGCGCTCGCCCTGGCTGTCGCCGCGCCGGATGCCAGCGCGTACTCGGCGATCTACGGCGGCGGCCCGTTC TATTCCGGCGGGACCGCGGTGATGAACGACCTGCGCGGCTCGGGTTTCACCACGGTCATCCTGTGGAGCTTCCACATCGA GGAGAACGGTGACCTGATCTACAACGACATTCCAGTGGTCAAGAACGGCGCCTACATGGGCGACCCTGCCTGGCCGACCC GACTGGCCACACTGAAGACCGCGCCGACCTCGGTCAATCGCATCGAGGTGTCGATCGGTGCCTGGGGTGTTCCGGACTTC GAACGCATGATTCGACTGGTCAACGGCACCGCGCCCGGCTGCGGCACCACCATCGTCTGCGGGACCGGAAGCAACAGCAT CCTGTACAGGAACTTCCAGGCGCTGAAGGCCGCCACCGGCGCCGACGCCGTGAACTTCGACGACGAAAGCGCCTATGACC TGGCCCCAACCACGACCTTCAGCCAGATGCTCATCGGGATGGGTTACAAGATCACCTTCGCACCGTACACGCAGCAGACG TTCTGGCGGAACCTCAGGAACAACCTCGGCAGCGCCGTCGATAGAATCTACCTGCAAGTGTACGCCGGCGGCGCCGGCAA CAACCCAGCGAGTTGGAACACCGCCATGGGCATGACTGTCGCCCCCGGCTTGTGGTCCAGGAATGGCAGCGGCTGCGCGT CGGGCGACAGCCCGGCCACGGTGCAGACCCGGATGAGCAACTGGAAGACCAGCGCCGGCATCAGCGGCGGCTTCATGTGG TTGTACGACGACATCCAGCAGTGCAGCGCGCAGGGGACGAGCGCGCAGTATGCGGCGGCAATCAACACCGCCGTCAGCGG CAACACCCCGCCGGTGGCGAACTTCGGTGTCACCGTCAGCGGCCTCACCGCGACCTTCAGTGATGCGTCCACCGACGCGG ACGGAACCATCGCCTCGCGCAGTTGGAATTTCGGCGACGGCAGCACCTCCACCGCGACCAACCCTTCACGCACCTATGCA AGCGCCGGCAACTACAACGTCACCCTGACCGTCACCGACAATGGCGGCGCCAGTCATACGAAGTCCCAGGCGGTGTCCGT CGGTTCGGGCTACGCCAATCTGGCGTTGAACAGGCCCACCACCAGTTCAGCCCCCTGCAACAGCACCGAATCGGCCGCCA AGGCGGTCAACGGCAGCGTCTCGGGCGGCACCACCGACAAGTTCTGCTCACTGACCTCGCCGGCGTGGATACAGGTCGAC CTCGGTACGGCGCAGACAGTCAGCAGCTTCACGCTCCAGCACGCGGGGGCGGGCGGTGAATCGACGGCCTGGAACAGCAG GGCATTCACCATCCAGACGTCGAGCAACGGCTCCACTTGGAGCACGCCCGTCACGGTGAGCAACAACACTGGCAGCACTT CGACCCATGCAATCACGGCGACGCCGGCGCGTTACATCCGGCTCAACGTGACGACGCCGACTCAGAACAGCGACCCAGCG ACGCGAATCTACGAGTTCGAAGTTCGCTGA
Upstream 100 bases:
>100_bases CCGGGCAGACATTCGCGATCAAACGTTCTTGCCTGACTTGAATCGCCCCAAAGATTGACAGACTGGAGTCGCCACTCGCA ATCTCGGCCCGTCGCTGTCA
Downstream 100 bases:
>100_bases ACGGTCGGTAACGAAGCCGGCCCTCGACACCACGAGGGTCGGCTTCGTGCCTGTGCCTGCTCCAAGCAGGCATTGACGGG CCCCATCTACGCGGACATCA
Product: lysyl endopeptidase domain-containing protein
Products: NA
Alternate protein names: API; Lysyl endopeptidase; Protease I [H]
Number of amino acids: Translated: 569; Mature: 568
Protein sequence:
>569_residues MATRSASGHERAQWIANRRGSPAIASSTTRNAKEHFMSKSNQSAPTLSRRSLLPTLAALALAVAAPDASAYSAIYGGGPF YSGGTAVMNDLRGSGFTTVILWSFHIEENGDLIYNDIPVVKNGAYMGDPAWPTRLATLKTAPTSVNRIEVSIGAWGVPDF ERMIRLVNGTAPGCGTTIVCGTGSNSILYRNFQALKAATGADAVNFDDESAYDLAPTTTFSQMLIGMGYKITFAPYTQQT FWRNLRNNLGSAVDRIYLQVYAGGAGNNPASWNTAMGMTVAPGLWSRNGSGCASGDSPATVQTRMSNWKTSAGISGGFMW LYDDIQQCSAQGTSAQYAAAINTAVSGNTPPVANFGVTVSGLTATFSDASTDADGTIASRSWNFGDGSTSTATNPSRTYA SAGNYNVTLTVTDNGGASHTKSQAVSVGSGYANLALNRPTTSSAPCNSTESAAKAVNGSVSGGTTDKFCSLTSPAWIQVD LGTAQTVSSFTLQHAGAGGESTAWNSRAFTIQTSSNGSTWSTPVTVSNNTGSTSTHAITATPARYIRLNVTTPTQNSDPA TRIYEFEVR
Sequences:
>Translated_569_residues MATRSASGHERAQWIANRRGSPAIASSTTRNAKEHFMSKSNQSAPTLSRRSLLPTLAALALAVAAPDASAYSAIYGGGPF YSGGTAVMNDLRGSGFTTVILWSFHIEENGDLIYNDIPVVKNGAYMGDPAWPTRLATLKTAPTSVNRIEVSIGAWGVPDF ERMIRLVNGTAPGCGTTIVCGTGSNSILYRNFQALKAATGADAVNFDDESAYDLAPTTTFSQMLIGMGYKITFAPYTQQT FWRNLRNNLGSAVDRIYLQVYAGGAGNNPASWNTAMGMTVAPGLWSRNGSGCASGDSPATVQTRMSNWKTSAGISGGFMW LYDDIQQCSAQGTSAQYAAAINTAVSGNTPPVANFGVTVSGLTATFSDASTDADGTIASRSWNFGDGSTSTATNPSRTYA SAGNYNVTLTVTDNGGASHTKSQAVSVGSGYANLALNRPTTSSAPCNSTESAAKAVNGSVSGGTTDKFCSLTSPAWIQVD LGTAQTVSSFTLQHAGAGGESTAWNSRAFTIQTSSNGSTWSTPVTVSNNTGSTSTHAITATPARYIRLNVTTPTQNSDPA TRIYEFEVR >Mature_568_residues ATRSASGHERAQWIANRRGSPAIASSTTRNAKEHFMSKSNQSAPTLSRRSLLPTLAALALAVAAPDASAYSAIYGGGPFY SGGTAVMNDLRGSGFTTVILWSFHIEENGDLIYNDIPVVKNGAYMGDPAWPTRLATLKTAPTSVNRIEVSIGAWGVPDFE RMIRLVNGTAPGCGTTIVCGTGSNSILYRNFQALKAATGADAVNFDDESAYDLAPTTTFSQMLIGMGYKITFAPYTQQTF WRNLRNNLGSAVDRIYLQVYAGGAGNNPASWNTAMGMTVAPGLWSRNGSGCASGDSPATVQTRMSNWKTSAGISGGFMWL YDDIQQCSAQGTSAQYAAAINTAVSGNTPPVANFGVTVSGLTATFSDASTDADGTIASRSWNFGDGSTSTATNPSRTYAS AGNYNVTLTVTDNGGASHTKSQAVSVGSGYANLALNRPTTSSAPCNSTESAAKAVNGSVSGGTTDKFCSLTSPAWIQVDL GTAQTVSSFTLQHAGAGGESTAWNSRAFTIQTSSNGSTWSTPVTVSNNTGSTSTHAITATPARYIRLNVTTPTQNSDPAT RIYEFEVR
Specific function: Unknown
COG id: COG3291
COG function: function code R; FOG: PKD repeat
Gene ontology:
Cell location: Secreted [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PKD domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008979 - InterPro: IPR017323 - InterPro: IPR009003 - InterPro: IPR022409 - InterPro: IPR000601 - InterPro: IPR002884 [H]
Pfam domain/function: PF01483 P_proprotein; PF00801 PKD [H]
EC number: =3.4.21.50 [H]
Molecular weight: Translated: 59392; Mature: 59261
Theoretical pI: Translated: 8.33; Mature: 8.33
Prosite motif: PS50022 FA58C_3 ; PS50093 PKD
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATRSASGHERAQWIANRRGSPAIASSTTRNAKEHFMSKSNQSAPTLSRRSLLPTLAALA CCCCCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH LAVAAPDASAYSAIYGGGPFYSGGTAVMNDLRGSGFTTVILWSFHIEENGDLIYNDIPVV HHHCCCCCHHHHEEECCCCCCCCCHHHHHHCCCCCEEEEEEEEEEEECCCCEEEECCCEE KNGAYMGDPAWPTRLATLKTAPTSVNRIEVSIGAWGVPDFERMIRLVNGTAPGCGTTIVC ECCCCCCCCCCCCEEEEEECCCCCCEEEEEEECCCCCCCHHHHHHHHCCCCCCCCCEEEE GTGSNSILYRNFQALKAATGADAVNFDDESAYDLAPTTTFSQMLIGMGYKITFAPYTQQT ECCCCCEEEECHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEECCCHHHH FWRNLRNNLGSAVDRIYLQVYAGGAGNNPASWNTAMGMTVAPGLWSRNGSGCASGDSPAT HHHHHHHHHHHHHHEEEEEEEECCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCE VQTRMSNWKTSAGISGGFMWLYDDIQQCSAQGTSAQYAAAINTAVSGNTPPVANFGVTVS EEEHHHCCCCCCCCCCCEEEEHHHHHHHHCCCCCCEEEEEEEHHCCCCCCCCCCCCEEEE GLTATFSDASTDADGTIASRSWNFGDGSTSTATNPSRTYASAGNYNVTLTVTDNGGASHT CEEEEECCCCCCCCCEEEECCCCCCCCCCCCCCCCCHHEECCCCEEEEEEEECCCCCCCC KSQAVSVGSGYANLALNRPTTSSAPCNSTESAAKAVNGSVSGGTTDKFCSLTSPAWIQVD HHHEEECCCCCEEEEECCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHEEECCCCCEEEEE LGTAQTVSSFTLQHAGAGGESTAWNSRAFTIQTSSNGSTWSTPVTVSNNTGSTSTHAITA CCCCHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCEECCEEEEECCCCCCCCEEEEE TPARYIRLNVTTPTQNSDPATRIYEFEVR CCCEEEEEEEECCCCCCCCCCEEEEEEEC >Mature Secondary Structure ATRSASGHERAQWIANRRGSPAIASSTTRNAKEHFMSKSNQSAPTLSRRSLLPTLAALA CCCCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH LAVAAPDASAYSAIYGGGPFYSGGTAVMNDLRGSGFTTVILWSFHIEENGDLIYNDIPVV HHHCCCCCHHHHEEECCCCCCCCCHHHHHHCCCCCEEEEEEEEEEEECCCCEEEECCCEE KNGAYMGDPAWPTRLATLKTAPTSVNRIEVSIGAWGVPDFERMIRLVNGTAPGCGTTIVC ECCCCCCCCCCCCEEEEEECCCCCCEEEEEEECCCCCCCHHHHHHHHCCCCCCCCCEEEE GTGSNSILYRNFQALKAATGADAVNFDDESAYDLAPTTTFSQMLIGMGYKITFAPYTQQT ECCCCCEEEECHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEECCCHHHH FWRNLRNNLGSAVDRIYLQVYAGGAGNNPASWNTAMGMTVAPGLWSRNGSGCASGDSPAT HHHHHHHHHHHHHHEEEEEEEECCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCE VQTRMSNWKTSAGISGGFMWLYDDIQQCSAQGTSAQYAAAINTAVSGNTPPVANFGVTVS EEEHHHCCCCCCCCCCCEEEEHHHHHHHHCCCCCCEEEEEEEHHCCCCCCCCCCCCEEEE GLTATFSDASTDADGTIASRSWNFGDGSTSTATNPSRTYASAGNYNVTLTVTDNGGASHT CEEEEECCCCCCCCCEEEECCCCCCCCCCCCCCCCCHHEECCCCEEEEEEEECCCCCCCC KSQAVSVGSGYANLALNRPTTSSAPCNSTESAAKAVNGSVSGGTTDKFCSLTSPAWIQVD HHHEEECCCCCEEEEECCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHEEECCCCCEEEEE LGTAQTVSSFTLQHAGAGGESTAWNSRAFTIQTSSNGSTWSTPVTVSNNTGSTSTHAITA CCCCHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCEECCEEEEECCCCCCCCEEEEE TPARYIRLNVTTPTQNSDPATRIYEFEVR CCCEEEEEEEECCCCCCCCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2684982; 2492988 [H]