| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is yfbL [C]
Identifier: 108760259
GI number: 108760259
Start: 6451664
End: 6452872
Strand: Direct
Name: yfbL [C]
Synonym: MXAN_5166
Alternate gene names: 108760259
Gene position: 6451664-6452872 (Clockwise)
Preceding gene: 108763487
Following gene: 108759375
Centisome position: 70.59
GC content: 66.09
Gene sequence:
>1209_bases ATGCCGGTCTCGCTGTTGCTGCTGAATGCCCCGCTGGCCCTTGCCGAGCCGCTCAAGGCCAAGCCAACGGACAAGACTGT CTGGATTGCGATTGGCACGGATGCCATCACGCCCATGCAGGAGACCTTCGCGGCCGAAGGCTGGAACGTGCCCACCGCCC TCAAGCAGCAGAAGCACGCGGGCGTGTTCCAACTGAAGGAGTCCCAGCTGTCGCGGCTGGCGCTGATGATGCACGAGAAG TTCGACCGATGCGCGGGCTTCATCACCTACGAGACGCAGGAGGAAGCACTGGCGTCCCTGGCGCCCGTAGCCCCCAATGC GGCCCAGAAGGCCGTCAGCTACACCCTCACCAACGCCGCGACCGTGAACACCCTGGTGGGTGAGCTCTCTGCCGCGAACA TCCGCACCACCATCGCCGACCTGTCCGCCTTCCCCACGCGCAGCCAGAGCTCGCAAGGGGGCGTGGACGCCGCGGCCATG CTCCTGGCGAAGTGGCAGGGCTACGTCACTGGCGCGGGACGCACGGACGTCACCGTGGCGTACTACCCGCACACGGGCTG GCGGCAGCCCTCCGTCATCCTCACCATCCCCGGCACCGATTTGTCTGGCGAGGTCGTCGTGGTGGGCGGCCACCTGGACT CCATCAGCTCCACCAGCGCCGCGCCTGGCGCCGATGACGACGCGTCCGGCATCGCGACGTTCACCGAAGTCATCCGCGCC GCCATGGCTCGCAACTACAGGCCCCAGCGGACGGTGAAGTTCATGGCCTACGCCGCGGAGGAGACGGGCCTGCGCGGCTC GCGGGAGATCGCCCTTTCGCACAAGAACAACAACATCAACGTCGTGGGGGTGATGCAGCTCGACATGACGAACTACAAGC ACCCCAACGCCACATCGGATGTGGGCATCGTCACCGACAACACGAACGCCACCCAGAACCAGTTCATCCGCGACCTGATA ACGACGTACGTCGGCGTGCCGTTCACCAATACGACCTGCGGCTACGGGTGCTCGGACCACGCCTCCTGGCACAGCCAGGG CTACGCGGCCTCCATCCCCTTCGAGGGGACTGTCGTCCAGAAGAACCCCAACATCCACACCCCCAGGGACACCCTGGCGA ACTCCGACAGCAGCGCCGCGCACGCGCTCAAGTTCTCCAAGATTGCCGCCGCCTATGTCGCCGAGCTGGCCAAGGGCACC GCGCAGTAG
Upstream 100 bases:
>100_bases CCTTTATTTCTCGAAAAGCGGAGGCTCCTCCCCGCAGCACGTCCCCCGTGCTGCGACGCAACGCCGTCTCCCTGGAGGAG CAATGCGGATGAAGACCTGG
Downstream 100 bases:
>100_bases GCCCTGAAGCCCAGGGGCCCCGGCGCGAGACATGCACCGGGGTCCCCCTGCATCACCAGTTTTGTCGGGATTACAACTTT GCCGGCATCTGGACTAGCCT
Product: leucyl aminopeptidase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 402; Mature: 401
Protein sequence:
>402_residues MPVSLLLLNAPLALAEPLKAKPTDKTVWIAIGTDAITPMQETFAAEGWNVPTALKQQKHAGVFQLKESQLSRLALMMHEK FDRCAGFITYETQEEALASLAPVAPNAAQKAVSYTLTNAATVNTLVGELSAANIRTTIADLSAFPTRSQSSQGGVDAAAM LLAKWQGYVTGAGRTDVTVAYYPHTGWRQPSVILTIPGTDLSGEVVVVGGHLDSISSTSAAPGADDDASGIATFTEVIRA AMARNYRPQRTVKFMAYAAEETGLRGSREIALSHKNNNINVVGVMQLDMTNYKHPNATSDVGIVTDNTNATQNQFIRDLI TTYVGVPFTNTTCGYGCSDHASWHSQGYAASIPFEGTVVQKNPNIHTPRDTLANSDSSAAHALKFSKIAAAYVAELAKGT AQ
Sequences:
>Translated_402_residues MPVSLLLLNAPLALAEPLKAKPTDKTVWIAIGTDAITPMQETFAAEGWNVPTALKQQKHAGVFQLKESQLSRLALMMHEK FDRCAGFITYETQEEALASLAPVAPNAAQKAVSYTLTNAATVNTLVGELSAANIRTTIADLSAFPTRSQSSQGGVDAAAM LLAKWQGYVTGAGRTDVTVAYYPHTGWRQPSVILTIPGTDLSGEVVVVGGHLDSISSTSAAPGADDDASGIATFTEVIRA AMARNYRPQRTVKFMAYAAEETGLRGSREIALSHKNNNINVVGVMQLDMTNYKHPNATSDVGIVTDNTNATQNQFIRDLI TTYVGVPFTNTTCGYGCSDHASWHSQGYAASIPFEGTVVQKNPNIHTPRDTLANSDSSAAHALKFSKIAAAYVAELAKGT AQ >Mature_401_residues PVSLLLLNAPLALAEPLKAKPTDKTVWIAIGTDAITPMQETFAAEGWNVPTALKQQKHAGVFQLKESQLSRLALMMHEKF DRCAGFITYETQEEALASLAPVAPNAAQKAVSYTLTNAATVNTLVGELSAANIRTTIADLSAFPTRSQSSQGGVDAAAML LAKWQGYVTGAGRTDVTVAYYPHTGWRQPSVILTIPGTDLSGEVVVVGGHLDSISSTSAAPGADDDASGIATFTEVIRAA MARNYRPQRTVKFMAYAAEETGLRGSREIALSHKNNNINVVGVMQLDMTNYKHPNATSDVGIVTDNTNATQNQFIRDLIT TYVGVPFTNTTCGYGCSDHASWHSQGYAASIPFEGTVVQKNPNIHTPRDTLANSDSSAAHALKFSKIAAAYVAELAKGTA Q
Specific function: Unknown
COG id: COG2234
COG function: function code R; Predicted aminopeptidases
Gene ontology:
Cell location: Secreted [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M28 family. M28E subfamily [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6320623, Length=361, Percent_Identity=29.6398891966759, Blast_Score=167, Evalue=2e-42,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012189 - InterPro: IPR007280 - InterPro: IPR007484 [H]
Pfam domain/function: PF04389 Peptidase_M28; PF04151 PPC [H]
EC number: =3.4.11.10 [H]
Molecular weight: Translated: 42762; Mature: 42630
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVSLLLLNAPLALAEPLKAKPTDKTVWIAIGTDAITPMQETFAAEGWNVPTALKQQKHA CCEEEEEECCCHHHHCCCCCCCCCCEEEEEECCCCCCCHHHHHHCCCCCCCHHHHHHHCC GVFQLKESQLSRLALMMHEKFDRCAGFITYETQEEALASLAPVAPNAAQKAVSYTLTNAA CCEEEHHHHHHHHHHHHHHHHHHHHCEEEEECHHHHHHHHCCCCCCHHHHHHEEEECCCH TVNTLVGELSAANIRTTIADLSAFPTRSQSSQGGVDAAAMLLAKWQGYVTGAGRTDVTVA HHHHHHHHHHHCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCEEECCCCCCEEEE YYPHTGWRQPSVILTIPGTDLSGEVVVVGGHLDSISSTSAAPGADDDASGIATFTEVIRA ECCCCCCCCCEEEEEECCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH AMARNYRPQRTVKFMAYAAEETGLRGSREIALSHKNNNINVVGVMQLDMTNYKHPNATSD HHHHCCCCHHHEEEEEEEHHHCCCCCCEEEEEEECCCCEEEEEEEEEECCCCCCCCCCCC VGIVTDNTNATQNQFIRDLITTYVGVPFTNTTCGYGCSDHASWHSQGYAASIPFEGTVVQ CEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEEE KNPNIHTPRDTLANSDSSAAHALKFSKIAAAYVAELAKGTAQ CCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure PVSLLLLNAPLALAEPLKAKPTDKTVWIAIGTDAITPMQETFAAEGWNVPTALKQQKHA CEEEEEECCCHHHHCCCCCCCCCCEEEEEECCCCCCCHHHHHHCCCCCCCHHHHHHHCC GVFQLKESQLSRLALMMHEKFDRCAGFITYETQEEALASLAPVAPNAAQKAVSYTLTNAA CCEEEHHHHHHHHHHHHHHHHHHHHCEEEEECHHHHHHHHCCCCCCHHHHHHEEEECCCH TVNTLVGELSAANIRTTIADLSAFPTRSQSSQGGVDAAAMLLAKWQGYVTGAGRTDVTVA HHHHHHHHHHHCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCEEECCCCCCEEEE YYPHTGWRQPSVILTIPGTDLSGEVVVVGGHLDSISSTSAAPGADDDASGIATFTEVIRA ECCCCCCCCCEEEEEECCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH AMARNYRPQRTVKFMAYAAEETGLRGSREIALSHKNNNINVVGVMQLDMTNYKHPNATSD HHHHCCCCHHHEEEEEEEHHHCCCCCCEEEEEEECCCCEEEEEEEEEECCCCCCCCCCCC VGIVTDNTNATQNQFIRDLITTYVGVPFTNTTCGYGCSDHASWHSQGYAASIPFEGTVVQ CEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEEE KNPNIHTPRDTLANSDSSAAHALKFSKIAAAYVAELAKGTAQ CCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1627651; 1569090; 1550363; 8087555; 8647077; 10413478; 11401547 [H]