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The map label for this gene is yiaD [C]

Identifier: 108763487

GI number: 108763487

Start: 6449231

End: 6449746

Strand: Direct

Name: yiaD [C]

Synonym: MXAN_5164

Alternate gene names: 108763487

Gene position: 6449231-6449746 (Clockwise)

Preceding gene: 108757326

Following gene: 108760259

Centisome position: 70.56

GC content: 66.09

Gene sequence:

>516_bases
ATGAAGCTCAAGGCCCTGTGCATCACCGTGTCGCTACTCACCCTTCCCGGCGTGGCCTTCGCGCAGGGCGGGTTCGGCGC
CCTCACCAAGGCCGCGGGCGATGCCGGCAAGTCCGCCGTGGAGAAGCGCGTCAACACCAAGCTGATGGACGAGGGCCGGC
AGAACCAGTGCAGCTTCAAGACAGGCACCGCCCAGCTCGATGCCGGCTGCGAAGCCAAGCTCAAGAAGCTGACCAACGCG
CTCGTCGACGCCAAGAAGCAGCTCGTCGCCGCTGGCGTAAAGTCCTACAAGTTCGAGGTCTCCGGCCACACCGACTCCAC
CGGTGACGCGGCCAAGAACAAGAAGCTCAGCGAGCAGCGCGCGGAGACCATCGTCAAGGAGCTCATCGCGCGCGGCATCC
CCCGGGGCGAAATCATCGCCGTGGGCTACGGCTCCGAGAAGCCGCTGGTGAAGCCCGACGACACCGCCGCCAAGAAGGCG
AAGAACCGCCGCTACGAGCTCCAGGTCCGCCTGTAG

Upstream 100 bases:

>100_bases
CACCCCTCCCAAGAGACACCGCGCCGCTGGACGAAGGCGCGGCCCCCGGGCAGCCTTCCGCCCGGCGAACACCGCCCATC
CAACGGAGGCGTCCTCACGT

Downstream 100 bases:

>100_bases
CCTCAGCTCGTGCGGGCGCCCGAGGACATGGGCCCCGCGGGCACGGCCACCTCGTCCCGCGGCGCCGTCCGGGCCGCGGG
AATGAAGGTCATCGCGCGCT

Product: OmpA family protein

Products: NA

Alternate protein names: OmpA/MotB Domain Protein; OmpA Family Protein; Ompa/Motb Domain Protein; OmpA/MotB; OmpA Family Outer Membrane Protein; V-Type H(+)-Translocating Pyrophosphatase; Chemotaxis Protein MotB; YceI Like Family; OmpA/MotB Family Outer Membrane Protein; OmpA Family Outer Membrane Lipoprotein; Ompa Family Protein

Number of amino acids: Translated: 171; Mature: 171

Protein sequence:

>171_residues
MKLKALCITVSLLTLPGVAFAQGGFGALTKAAGDAGKSAVEKRVNTKLMDEGRQNQCSFKTGTAQLDAGCEAKLKKLTNA
LVDAKKQLVAAGVKSYKFEVSGHTDSTGDAAKNKKLSEQRAETIVKELIARGIPRGEIIAVGYGSEKPLVKPDDTAAKKA
KNRRYELQVRL

Sequences:

>Translated_171_residues
MKLKALCITVSLLTLPGVAFAQGGFGALTKAAGDAGKSAVEKRVNTKLMDEGRQNQCSFKTGTAQLDAGCEAKLKKLTNA
LVDAKKQLVAAGVKSYKFEVSGHTDSTGDAAKNKKLSEQRAETIVKELIARGIPRGEIIAVGYGSEKPLVKPDDTAAKKA
KNRRYELQVRL
>Mature_171_residues
MKLKALCITVSLLTLPGVAFAQGGFGALTKAAGDAGKSAVEKRVNTKLMDEGRQNQCSFKTGTAQLDAGCEAKLKKLTNA
LVDAKKQLVAAGVKSYKFEVSGHTDSTGDAAKNKKLSEQRAETIVKELIARGIPRGEIIAVGYGSEKPLVKPDDTAAKKA
KNRRYELQVRL

Specific function: Unknown

COG id: COG1360

COG function: function code N; Flagellar motor protein

Gene ontology:

Cell location: Attached To The Membrane By A Lipid Anchor [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18219; Mature: 18219

Theoretical pI: Translated: 10.43; Mature: 10.43

Prosite motif: PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLKALCITVSLLTLPGVAFAQGGFGALTKAAGDAGKSAVEKRVNTKLMDEGRQNQCSFK
CCCHHHHHHHHHHHHCCHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCC
TGTAQLDAGCEAKLKKLTNALVDAKKQLVAAGVKSYKFEVSGHTDSTGDAAKNKKLSEQR
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCHHHHHHHHHHH
AETIVKELIARGIPRGEIIAVGYGSEKPLVKPDDTAAKKAKNRRYELQVRL
HHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCHHHHHHCCCCEEEEEEC
>Mature Secondary Structure
MKLKALCITVSLLTLPGVAFAQGGFGALTKAAGDAGKSAVEKRVNTKLMDEGRQNQCSFK
CCCHHHHHHHHHHHHCCHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCC
TGTAQLDAGCEAKLKKLTNALVDAKKQLVAAGVKSYKFEVSGHTDSTGDAAKNKKLSEQR
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCHHHHHHHHHHH
AETIVKELIARGIPRGEIIAVGYGSEKPLVKPDDTAAKKAKNRRYELQVRL
HHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCHHHHHHCCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA