The gene/protein map for NC_008095 is currently unavailable.
Definition Myxococcus xanthus DK 1622 chromosome, complete genome.
Accession NC_008095
Length 9,139,763

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The map label for this gene is ccmA [H]

Identifier: 108760256

GI number: 108760256

Start: 3810439

End: 3811098

Strand: Reverse

Name: ccmA [H]

Synonym: MXAN_3258

Alternate gene names: 108760256

Gene position: 3811098-3810439 (Counterclockwise)

Preceding gene: 108757670

Following gene: 108760001

Centisome position: 41.7

GC content: 72.12

Gene sequence:

>660_bases
ATGCCTCCCCTCTCCGCCGCCCCCGCGCTTGCCCTGCACGACGTCAGCAAGCGGTATGGCCGCCGGTGGGCCCTGGCGCG
TCTCACGTACGCGCTCCCCGCCGGACGCTCGCTGCTGCTCACCGGCCACAACGGTTCCGGGAAGACGACCCTGCTGCGCC
TGCTGGCCACCGCCCTGAGCCCCACCGCGGGCCGGGTGGAAGTGCTCGGCCGCGACGCGGTGGTGGAGCGCGACGCGGTG
CGCCGGGACGTGGCGCTGCTGTCGCACGCCAGCTTCCTCTATGAGGACCTCACCGCGCACCAGAACCTCACGGTGCTGGC
CCGGCTTCTGGGACTGCCCTCGCCCGCGGACGCCGCCAGCGACGAGCTGACCCGGGTGGGACTCAGCCGCCGCTCCGACA
GCCCGGTCCGCAGCTTCAGCGCCGGCATGCGCAAGCGCCTGGCGATTGCCCGCCTGTTGCTCAAGGCGCCGTCCATCGCG
CTGCTCGACGAGCCCTTCGGCGAGCTGGACCCCGCGGGCATCCGCGACATGGAGGCCATCATCGCCGAACTCAAGGCCAG
CGGCGTCACCGTCATCCTGGCCACCCACCTCATCGAGCAAGGCCTGACGCTGTGTGAAGAACGCCTTCACCTGCAGGAAG
GCCGGGCGGTGGCGGCATGA

Upstream 100 bases:

>100_bases
AAAACCTTTCCTCCCGATGTGGTCGCCCTTTCTCCATCCAGGCCACCATCTTGGGTTTCACTGGTGGACGTTCTGGTTTC
CGGATACGAACGCCCCGCCG

Downstream 100 bases:

>100_bases
GCACCTCGCGTCCCCGCCCCATCGGCCTTTTGACGGCGACCCTGGCGTTGCTGCGCAAGGACCTGCTCATCGAGTGGCGC
ACCCGCGCGCGCCTCAACGC

Product: heme ABC exporter, ATP-binding protein CcmA

Products: NA

Alternate protein names: Nodulation ATP-binding protein I [H]

Number of amino acids: Translated: 219; Mature: 218

Protein sequence:

>219_residues
MPPLSAAPALALHDVSKRYGRRWALARLTYALPAGRSLLLTGHNGSGKTTLLRLLATALSPTAGRVEVLGRDAVVERDAV
RRDVALLSHASFLYEDLTAHQNLTVLARLLGLPSPADAASDELTRVGLSRRSDSPVRSFSAGMRKRLAIARLLLKAPSIA
LLDEPFGELDPAGIRDMEAIIAELKASGVTVILATHLIEQGLTLCEERLHLQEGRAVAA

Sequences:

>Translated_219_residues
MPPLSAAPALALHDVSKRYGRRWALARLTYALPAGRSLLLTGHNGSGKTTLLRLLATALSPTAGRVEVLGRDAVVERDAV
RRDVALLSHASFLYEDLTAHQNLTVLARLLGLPSPADAASDELTRVGLSRRSDSPVRSFSAGMRKRLAIARLLLKAPSIA
LLDEPFGELDPAGIRDMEAIIAELKASGVTVILATHLIEQGLTLCEERLHLQEGRAVAA
>Mature_218_residues
PPLSAAPALALHDVSKRYGRRWALARLTYALPAGRSLLLTGHNGSGKTTLLRLLATALSPTAGRVEVLGRDAVVERDAVR
RDVALLSHASFLYEDLTAHQNLTVLARLLGLPSPADAASDELTRVGLSRRSDSPVRSFSAGMRKRLAIARLLLKAPSIAL
LDEPFGELDPAGIRDMEAIIAELKASGVTVILATHLIEQGLTLCEERLHLQEGRAVAA

Specific function: Part of the ABC transporter complex NodIJ involved in the export of the nodulation factors (Nod factors), the bacterial signal molecules that induce symbiosis and subsequent nodulation induction. Nod factors are LCO (lipo-chitin oligosaccharide), a modifi

COG id: COG1131

COG function: function code V; ABC-type multidrug transport system, ATPase component

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

Organism=Homo sapiens, GI150417984, Length=210, Percent_Identity=30.952380952381, Blast_Score=95, Evalue=5e-20,
Organism=Homo sapiens, GI47078218, Length=202, Percent_Identity=29.2079207920792, Blast_Score=95, Evalue=6e-20,
Organism=Homo sapiens, GI45446740, Length=202, Percent_Identity=29.2079207920792, Blast_Score=94, Evalue=7e-20,
Organism=Homo sapiens, GI105990541, Length=196, Percent_Identity=29.5918367346939, Blast_Score=92, Evalue=4e-19,
Organism=Homo sapiens, GI27881501, Length=216, Percent_Identity=27.3148148148148, Blast_Score=89, Evalue=3e-18,
Organism=Homo sapiens, GI30795238, Length=216, Percent_Identity=27.3148148148148, Blast_Score=89, Evalue=3e-18,
Organism=Homo sapiens, GI153792144, Length=200, Percent_Identity=29, Blast_Score=89, Evalue=3e-18,
Organism=Homo sapiens, GI21536376, Length=201, Percent_Identity=28.3582089552239, Blast_Score=88, Evalue=6e-18,
Organism=Homo sapiens, GI116734710, Length=201, Percent_Identity=30.3482587064677, Blast_Score=88, Evalue=6e-18,
Organism=Homo sapiens, GI31657092, Length=207, Percent_Identity=30.4347826086957, Blast_Score=85, Evalue=6e-17,
Organism=Homo sapiens, GI6005701, Length=222, Percent_Identity=29.2792792792793, Blast_Score=84, Evalue=9e-17,
Organism=Homo sapiens, GI27262624, Length=216, Percent_Identity=25.462962962963, Blast_Score=81, Evalue=7e-16,
Organism=Homo sapiens, GI27262626, Length=216, Percent_Identity=25.462962962963, Blast_Score=81, Evalue=7e-16,
Organism=Homo sapiens, GI27436953, Length=204, Percent_Identity=29.9019607843137, Blast_Score=79, Evalue=4e-15,
Organism=Homo sapiens, GI27477115, Length=208, Percent_Identity=28.3653846153846, Blast_Score=79, Evalue=4e-15,
Organism=Homo sapiens, GI9955963, Length=180, Percent_Identity=28.3333333333333, Blast_Score=66, Evalue=2e-11,
Organism=Escherichia coli, GI87081709, Length=214, Percent_Identity=28.9719626168224, Blast_Score=96, Evalue=1e-21,
Organism=Escherichia coli, GI1787089, Length=221, Percent_Identity=31.6742081447964, Blast_Score=96, Evalue=2e-21,
Organism=Escherichia coli, GI87081782, Length=191, Percent_Identity=29.3193717277487, Blast_Score=92, Evalue=2e-20,
Organism=Escherichia coli, GI1789873, Length=211, Percent_Identity=32.7014218009479, Blast_Score=92, Evalue=3e-20,
Organism=Escherichia coli, GI48994943, Length=223, Percent_Identity=29.1479820627803, Blast_Score=91, Evalue=5e-20,
Organism=Escherichia coli, GI1786319, Length=214, Percent_Identity=31.3084112149533, Blast_Score=91, Evalue=9e-20,
Organism=Escherichia coli, GI1789672, Length=218, Percent_Identity=27.9816513761468, Blast_Score=89, Evalue=2e-19,
Organism=Escherichia coli, GI1787164, Length=214, Percent_Identity=33.6448598130841, Blast_Score=87, Evalue=7e-19,
Organism=Escherichia coli, GI87081791, Length=202, Percent_Identity=31.6831683168317, Blast_Score=85, Evalue=4e-18,
Organism=Escherichia coli, GI1787029, Length=195, Percent_Identity=28.7179487179487, Blast_Score=85, Evalue=5e-18,
Organism=Escherichia coli, GI1787712, Length=214, Percent_Identity=31.3084112149533, Blast_Score=84, Evalue=1e-17,
Organism=Escherichia coli, GI87082064, Length=184, Percent_Identity=35.3260869565217, Blast_Score=83, Evalue=1e-17,
Organism=Escherichia coli, GI1787105, Length=205, Percent_Identity=32.1951219512195, Blast_Score=83, Evalue=1e-17,
Organism=Escherichia coli, GI1789593, Length=214, Percent_Identity=27.1028037383178, Blast_Score=82, Evalue=2e-17,
Organism=Escherichia coli, GI1788225, Length=224, Percent_Identity=26.3392857142857, Blast_Score=80, Evalue=1e-16,
Organism=Escherichia coli, GI1789032, Length=217, Percent_Identity=27.6497695852535, Blast_Score=80, Evalue=1e-16,
Organism=Escherichia coli, GI1786563, Length=199, Percent_Identity=30.1507537688442, Blast_Score=80, Evalue=1e-16,
Organism=Escherichia coli, GI1788761, Length=216, Percent_Identity=30.0925925925926, Blast_Score=79, Evalue=2e-16,
Organism=Escherichia coli, GI1790544, Length=222, Percent_Identity=27.9279279279279, Blast_Score=78, Evalue=4e-16,
Organism=Escherichia coli, GI1790467, Length=213, Percent_Identity=28.169014084507, Blast_Score=77, Evalue=7e-16,
Organism=Escherichia coli, GI87081834, Length=222, Percent_Identity=27.9279279279279, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI1789864, Length=221, Percent_Identity=28.9592760180996, Blast_Score=76, Evalue=1e-15,
Organism=Escherichia coli, GI1788210, Length=224, Percent_Identity=25.4464285714286, Blast_Score=76, Evalue=2e-15,
Organism=Escherichia coli, GI1786872, Length=216, Percent_Identity=30.5555555555556, Blast_Score=75, Evalue=2e-15,
Organism=Escherichia coli, GI1787370, Length=216, Percent_Identity=26.8518518518519, Blast_Score=75, Evalue=3e-15,
Organism=Escherichia coli, GI1786803, Length=210, Percent_Identity=29.0476190476191, Blast_Score=75, Evalue=4e-15,
Organism=Escherichia coli, GI87082268, Length=215, Percent_Identity=28.8372093023256, Blast_Score=75, Evalue=5e-15,
Organism=Escherichia coli, GI1786398, Length=210, Percent_Identity=28.5714285714286, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI1786253, Length=192, Percent_Identity=28.6458333333333, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI1789586, Length=222, Percent_Identity=27.9279279279279, Blast_Score=72, Evalue=4e-14,
Organism=Escherichia coli, GI1786345, Length=220, Percent_Identity=32.7272727272727, Blast_Score=70, Evalue=8e-14,
Organism=Escherichia coli, GI1786698, Length=194, Percent_Identity=28.3505154639175, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI1788053, Length=200, Percent_Identity=29.5, Blast_Score=69, Evalue=3e-13,
Organism=Escherichia coli, GI1788450, Length=212, Percent_Identity=28.3018867924528, Blast_Score=68, Evalue=4e-13,
Organism=Escherichia coli, GI1788897, Length=206, Percent_Identity=27.6699029126214, Blast_Score=67, Evalue=7e-13,
Organism=Escherichia coli, GI1790739, Length=215, Percent_Identity=28.3720930232558, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI1790525, Length=225, Percent_Identity=22.2222222222222, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI1788644, Length=202, Percent_Identity=29.2079207920792, Blast_Score=65, Evalue=3e-12,
Organism=Escherichia coli, GI1789751, Length=198, Percent_Identity=29.7979797979798, Blast_Score=64, Evalue=8e-12,
Organism=Escherichia coli, GI2367384, Length=205, Percent_Identity=24.8780487804878, Blast_Score=64, Evalue=1e-11,
Organism=Escherichia coli, GI1790190, Length=217, Percent_Identity=22.5806451612903, Blast_Score=63, Evalue=1e-11,
Organism=Escherichia coli, GI87082267, Length=168, Percent_Identity=27.9761904761905, Blast_Score=63, Evalue=2e-11,
Organism=Escherichia coli, GI48994997, Length=229, Percent_Identity=26.2008733624454, Blast_Score=62, Evalue=2e-11,
Organism=Escherichia coli, GI1789991, Length=201, Percent_Identity=25.3731343283582, Blast_Score=62, Evalue=2e-11,
Organism=Escherichia coli, GI1786703, Length=206, Percent_Identity=28.1553398058252, Blast_Score=62, Evalue=3e-11,
Organism=Escherichia coli, GI1787112, Length=224, Percent_Identity=30.8035714285714, Blast_Score=62, Evalue=4e-11,
Organism=Escherichia coli, GI1787182, Length=206, Percent_Identity=27.1844660194175, Blast_Score=61, Evalue=5e-11,
Organism=Escherichia coli, GI1788165, Length=191, Percent_Identity=27.7486910994764, Blast_Score=60, Evalue=1e-10,
Organism=Caenorhabditis elegans, GI71983510, Length=188, Percent_Identity=28.7234042553192, Blast_Score=88, Evalue=3e-18,
Organism=Caenorhabditis elegans, GI71983523, Length=188, Percent_Identity=28.7234042553192, Blast_Score=88, Evalue=3e-18,
Organism=Caenorhabditis elegans, GI71983516, Length=188, Percent_Identity=28.7234042553192, Blast_Score=88, Evalue=3e-18,
Organism=Caenorhabditis elegans, GI115533608, Length=208, Percent_Identity=28.8461538461538, Blast_Score=85, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI17510237, Length=188, Percent_Identity=26.063829787234, Blast_Score=83, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI17565586, Length=184, Percent_Identity=26.0869565217391, Blast_Score=83, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI193202349, Length=199, Percent_Identity=30.1507537688442, Blast_Score=76, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI17567265, Length=206, Percent_Identity=28.6407766990291, Blast_Score=67, Evalue=6e-12,
Organism=Saccharomyces cerevisiae, GI6324314, Length=186, Percent_Identity=29.0322580645161, Blast_Score=63, Evalue=4e-11,
Organism=Drosophila melanogaster, GI24666092, Length=215, Percent_Identity=27.906976744186, Blast_Score=104, Evalue=4e-23,
Organism=Drosophila melanogaster, GI221512771, Length=198, Percent_Identity=27.2727272727273, Blast_Score=92, Evalue=4e-19,
Organism=Drosophila melanogaster, GI28574150, Length=215, Percent_Identity=27.4418604651163, Blast_Score=89, Evalue=2e-18,
Organism=Drosophila melanogaster, GI116007328, Length=215, Percent_Identity=27.4418604651163, Blast_Score=89, Evalue=2e-18,
Organism=Drosophila melanogaster, GI116007184, Length=215, Percent_Identity=26.5116279069767, Blast_Score=86, Evalue=1e-17,
Organism=Drosophila melanogaster, GI221500365, Length=215, Percent_Identity=26.5116279069767, Blast_Score=86, Evalue=1e-17,
Organism=Drosophila melanogaster, GI24643674, Length=202, Percent_Identity=25.7425742574257, Blast_Score=84, Evalue=1e-16,
Organism=Drosophila melanogaster, GI24648314, Length=215, Percent_Identity=25.1162790697674, Blast_Score=82, Evalue=3e-16,
Organism=Drosophila melanogaster, GI28573573, Length=177, Percent_Identity=29.9435028248588, Blast_Score=80, Evalue=1e-15,
Organism=Drosophila melanogaster, GI28573571, Length=177, Percent_Identity=29.9435028248588, Blast_Score=80, Evalue=1e-15,
Organism=Drosophila melanogaster, GI21357907, Length=233, Percent_Identity=27.0386266094421, Blast_Score=80, Evalue=1e-15,
Organism=Drosophila melanogaster, GI24666836, Length=199, Percent_Identity=31.1557788944724, Blast_Score=66, Evalue=2e-11,
Organism=Drosophila melanogaster, GI85816269, Length=208, Percent_Identity=28.8461538461538, Blast_Score=65, Evalue=3e-11,
Organism=Drosophila melanogaster, GI24580553, Length=208, Percent_Identity=28.8461538461538, Blast_Score=65, Evalue=3e-11,
Organism=Drosophila melanogaster, GI85724864, Length=208, Percent_Identity=28.8461538461538, Blast_Score=65, Evalue=5e-11,
Organism=Drosophila melanogaster, GI24580555, Length=208, Percent_Identity=28.8461538461538, Blast_Score=65, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR015851
- InterPro:   IPR005978
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: 3.6.3.30 [C]

Molecular weight: Translated: 23444; Mature: 23312

Theoretical pI: Translated: 10.00; Mature: 10.00

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure: 

>Translated Secondary Structure
MPPLSAAPALALHDVSKRYGRRWALARLTYALPAGRSLLLTGHNGSGKTTLLRLLATALS
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHC
PTAGRVEVLGRDAVVERDAVRRDVALLSHASFLYEDLTAHQNLTVLARLLGLPSPADAAS
CCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCHHH
DELTRVGLSRRSDSPVRSFSAGMRKRLAIARLLLKAPSIALLDEPFGELDPAGIRDMEAI
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCHHHHHHH
IAELKASGVTVILATHLIEQGLTLCEERLHLQEGRAVAA
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
PPLSAAPALALHDVSKRYGRRWALARLTYALPAGRSLLLTGHNGSGKTTLLRLLATALS
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHC
PTAGRVEVLGRDAVVERDAVRRDVALLSHASFLYEDLTAHQNLTVLARLLGLPSPADAAS
CCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCHHH
DELTRVGLSRRSDSPVRSFSAGMRKRLAIARLLLKAPSIALLDEPFGELDPAGIRDMEAI
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCHHHHHHH
IAELKASGVTVILATHLIEQGLTLCEERLHLQEGRAVAA
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11823852 [H]