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The map label for this gene is ccmB [H]

Identifier: 108760001

GI number: 108760001

Start: 3809741

End: 3810442

Strand: Reverse

Name: ccmB [H]

Synonym: MXAN_3257

Alternate gene names: 108760001

Gene position: 3810442-3809741 (Counterclockwise)

Preceding gene: 108760256

Following gene: 108757543

Centisome position: 41.69

GC content: 65.24

Gene sequence:

>702_bases
ATGAGCACCTCGCGTCCCCGCCCCATCGGCCTTTTGACGGCGACCCTGGCGTTGCTGCGCAAGGACCTGCTCATCGAGTG
GCGCACCCGCGCGCGCCTCAACGCCATCATCTTCTTCGCGCTGGCCACGCTGCTGATGTTCTCCTTCGCGCTGGGCCCCG
ACACGAAGCTGCTGGAGAAGAACGCCGGCGGCTACTTCTGGTTGGCCATCCTCTTCGCCAGCGTGCTCGCCCTGGGCGAG
TCGTTCCGCGTCGAGTCGGAGAACGCGTGCATGGACGGCATCCGGCTGGCCCCCGCCGACGCCCGCGCCATCTTCCTGTC
CAAGGCCCTGGGCAACACCCTGCTGCTGACGGCCCTGGGCGTCCTGCTGGTGCCCGTCATGGTGGCCCTGTACGGGGTGC
GCATCGTCACCAGCATGGTGGACCTGGGGCTCATCCTCCTGCTCGGCAGCCTGGCCTTGAGCGCCCCAGGAACCGTCTAC
GCCGCGATTTCGAGCAATGCCCGGGCACGGGATGTGCTTCTGCCTTTGCTATTGTTCCCGCTGGTCATCCCCGCCCTCCT
CTCCGCGGCCAAGGCGACCACGCTCGTACTTCAGGGAGACCCCATGAATCAGTTTGGCTCATGGGTCGGGCTTTTGGGCG
GATTCAATCTGATTTATTGGGGCATAGGCTTCTTGCTGTTCCCGCGGATCATCGAGGACTGA

Upstream 100 bases:

>100_bases
CCAGCGGCGTCACCGTCATCCTGGCCACCCACCTCATCGAGCAAGGCCTGACGCTGTGTGAAGAACGCCTTCACCTGCAG
GAAGGCCGGGCGGTGGCGGC

Downstream 100 bases:

>100_bases
CGGATGGGAAAGTTCATCAAGTGGGGCCTGCCGGCGCTGGCGCTGGTCGTTCTCGCCGCGGGGTGGTGGCTGGGACTGGA
GTGGGCACCGCCGGACCGCG

Product: heme exporter protein CcmB

Products: NA

Alternate protein names: Cytochrome c-type biogenesis protein CycW [H]

Number of amino acids: Translated: 233; Mature: 232

Protein sequence:

>233_residues
MSTSRPRPIGLLTATLALLRKDLLIEWRTRARLNAIIFFALATLLMFSFALGPDTKLLEKNAGGYFWLAILFASVLALGE
SFRVESENACMDGIRLAPADARAIFLSKALGNTLLLTALGVLLVPVMVALYGVRIVTSMVDLGLILLLGSLALSAPGTVY
AAISSNARARDVLLPLLLFPLVIPALLSAAKATTLVLQGDPMNQFGSWVGLLGGFNLIYWGIGFLLFPRIIED

Sequences:

>Translated_233_residues
MSTSRPRPIGLLTATLALLRKDLLIEWRTRARLNAIIFFALATLLMFSFALGPDTKLLEKNAGGYFWLAILFASVLALGE
SFRVESENACMDGIRLAPADARAIFLSKALGNTLLLTALGVLLVPVMVALYGVRIVTSMVDLGLILLLGSLALSAPGTVY
AAISSNARARDVLLPLLLFPLVIPALLSAAKATTLVLQGDPMNQFGSWVGLLGGFNLIYWGIGFLLFPRIIED
>Mature_232_residues
STSRPRPIGLLTATLALLRKDLLIEWRTRARLNAIIFFALATLLMFSFALGPDTKLLEKNAGGYFWLAILFASVLALGES
FRVESENACMDGIRLAPADARAIFLSKALGNTLLLTALGVLLVPVMVALYGVRIVTSMVDLGLILLLGSLALSAPGTVYA
AISSNARARDVLLPLLLFPLVIPALLSAAKATTLVLQGDPMNQFGSWVGLLGGFNLIYWGIGFLLFPRIIED

Specific function: Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes [H]

COG id: COG2386

COG function: function code O; ABC-type transport system involved in cytochrome c biogenesis, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CcmB/CycW/HelB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003544 [H]

Pfam domain/function: PF03379 CcmB [H]

EC number: NA

Molecular weight: Translated: 25030; Mature: 24899

Theoretical pI: Translated: 9.89; Mature: 9.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTSRPRPIGLLTATLALLRKDLLIEWRTRARLNAIIFFALATLLMFSFALGPDTKLLEK
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHC
NAGGYFWLAILFASVLALGESFRVESENACMDGIRLAPADARAIFLSKALGNTLLLTALG
CCCCHHHHHHHHHHHHHHCHHCCCCCCCHHHCCCEECCCHHHHHHHHHHHCHHHHHHHHH
VLLVPVMVALYGVRIVTSMVDLGLILLLGSLALSAPGTVYAAISSNARARDVLLPLLLFP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHH
LVIPALLSAAKATTLVLQGDPMNQFGSWVGLLGGFNLIYWGIGFLLFPRIIED
HHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
STSRPRPIGLLTATLALLRKDLLIEWRTRARLNAIIFFALATLLMFSFALGPDTKLLEK
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHC
NAGGYFWLAILFASVLALGESFRVESENACMDGIRLAPADARAIFLSKALGNTLLLTALG
CCCCHHHHHHHHHHHHHHCHHCCCCCCCHHHCCCEECCCHHHHHHHHHHHCHHHHHHHHH
VLLVPVMVALYGVRIVTSMVDLGLILLLGSLALSAPGTVYAAISSNARARDVLLPLLLFP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHH
LVIPALLSAAKATTLVLQGDPMNQFGSWVGLLGGFNLIYWGIGFLLFPRIIED
HHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1850420; 12597275 [H]