| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108760195
Identifier: 108760195
GI number: 108760195
Start: 1083081
End: 1085825
Strand: Direct
Name: 108760195
Synonym: MXAN_0945
Alternate gene names: NA
Gene position: 1083081-1085825 (Clockwise)
Preceding gene: 108761384
Following gene: 108757787
Centisome position: 11.85
GC content: 71.55
Gene sequence:
>2745_bases ATGTTGAAGCCGGCGTACGACAAAGTCCTGGTCCTGGCGCTGGCCACGCCCGTCTTGGTGTTGACCGTCCTTCTTGCCCG CACGCCCTCCAAGGGAAGCGGGGCACCTGTATCCGCGCAGTTCTGGGCGGAGCGCCGCTCCGCGTCACGCATCGAGGCTC GGCTCACGCACCCCGAAGCGGACCGCTACCGGCCACGTATGTCGGCGGGCGGCTGCCCCGTCGCTCCCGAACCCATCCCA CTGCGAGACCTCGCCCGGCTGGAGGAAGCGGGCGACCTGTCCGGTATCGCCTCCGCGTATGCCCTTCAGGGCGAGTGGAA CCAGGCGGCCTCGTTCCTGGAGCGCATGCCCGCCTCTCCGGACCGCGACAGTGATTTGGCCGCGGTGTACCTCGCCCGCG GCTCACATGAGCAGGCCTTGCGGTTGCTGGACGGCGTGCTGAAGGCGCAGCCGAAGCATGCGCAGGCCATGTGGAACCGC GCGCTGGTGCTCCAGGCGATGGGGCTCACGATGAAGGCGGCGGACACCTTCGAACAGGTGGCGCTGATGGGGGAGCCGGG CTGGAGCCGCGAGGCGAAGGCCAACGCTCGCGAGCAACGCGACGCCACGATGGAGCGCGCCCGCCGGTGGAAGGAAGCGC GCGAGGCCACGCTGGCGCTGGTGGATGACCCTCAGGCGCCTCTTCCGCTGGAGGCGGCCCGCAAGGACCCGGGCATCGTC CGGCAGGCCTTCTATGAAGTGGTCCGCGCGGCGCCGTCGAAGGAGCGCGTCCTGGCCCTGCTGCCCCTGGCGCAGGAGTT GGACCGCGGCCACGGAGGCTCCGCGCTGACGGACTACGTCAAGCGGGTGAGCGGCCGGAACTTCACGCGCCGCGGCGTGC TGTCGCGCGAGTACGCGTCGCTGGTGCGCGGCAAGCTGAACCAGCCGGACAAGCTGCTGGAGCGGGTGCTGGCGTCGGGA GAGGACGACCTCTTCCTGGGCACGGCCCAGCACACGCGGGCCACGCGCCGCATGTTTTCGCAGGTGGTGGAGCGGGCGAA GCGCCAGAACGACCCCTGGTTCAACCTCTACATCGAGCGTGAGGAGGCCATCCGCGAGACGGCCGAGGGCCAGTGGTGGA AGGCCGAGCAGCGCATCTTCAACGCGCTCCAGCGCTGCCGCGAGGGCGGTCTGTCCACGCGCTGCGTGGACCTGGAGCTG CGCCTGAGCATCCTCTACGCCGACCTCCAGCGCCTCACCGAGGGCGAGCAGCATGCCCGCACCGCCTGGGCCTGGGCGCG CCAGCTCCGGGAATGGGACATGGAGTTCACCGCCCTGGAGGCGCTGGCCGCCATCACCCGCTCACGCGGGGACTTCGCCA GCTCGCGTGCCTATGTGGAGGAGTGGTCCGCCCGCGGGCACGTCAACTGCGTCTGGCCCCGGGAGAACCTGGCCCACACG TACTACCTGGACAACCGCATGGACGACGCGCGCCGCGAGGTGGACGCGAACGCCGCCTGCAAGAACGAGCCGCTGAGCCT GCTGTTCGCCGTCAACCTCGCGGAGCTGTCGCGCACCCGGCCGAAGCCAGGGGACGAGGCGTTGCTGCGGCAGGCCCTCA CGTGGGCCAACCACAGCAACCCCATGCCCAGCGACGCGGTGTATGCCCGTTACGTGGAGGGCCGCTTCCTGCTGGATTCC GACAGAGCCCGGGGGCTGGCGCTGCTGCGGCAGACCATCACCGAGGCGGAGGCATTGCCTCGGGGAGATTCACTGGCGCG CGAGGCCTGGGCGCTGAGCTATTCGTCGCTCGTCACGGACGCGGGCAAGGCGGGCGAGTACACCCAGGCGTTGGAGTTGA TGGCCGCGCAGCTTGGCACGCCCGTGCCCCAGCGCTGCGCCCTTGCGGCGGCGGTGCATGGCGAGCGCACGGTGCTGGTG GCGCGCGGGACGCAAGGCCAGGTGCTGGGCCACTACGAGACGGACCGGCAGGGGCCATTCATCCGCGCGGACACCTCGCG GCTGGTGCCGGATCGGCTGCGTGAGGTGTTGCGTGGCTGCGAGCGCGTGGACGTGCTTGCCTGGCCGCCCGTCTTCGGCC ACACGGACCTGTTGCCGCCGGAGGTGCCCTGGAGCTTCCGGCTCGGCCGCACGGCCCAGCCGCGCACCACGCCCACGGCC CGGCGGCTCGTCGTCTCCAGCGTGGATGCGCCCGCGCTGCTCCAACTGCCGCGGCTGCCGCAGTGGTTGCCCTCGCAGGA GCCGGAGGCGGTGCCGCTGCAGGTGCTGTCCGGCTCGGACGCCACGCCCGCGCGCGTGCTGGCGGACATGCGGGACGCCA CCGAAATCGAAATCCACGCCCACGGCATCATGGACCCGGCGCTCTCGGATGCGTCGCTGGTGGTGCTGTCCCCGGAGACG AGCGGCCGCTACGCGCTCACCGCGGACGTGGTGCGGCAGCAGACGCTCACGGGGGCGCCCATGGTGTTCCTGGCGGCGTG CAGCGCCGGACGCGCGGCGAGCACCACCACCAGCCACGAGCCCTTCAGCCTGCCCGCGGCGTTCATCGATGCGGGCGCAC GGGCGGTGCTGGCCTCCACGGTGGACATCCCGGATGCCGCCGGCCGCTTCTTCGATGGGGTCCGGCGCCGCATTCGCGAA GGGGCCGCGCCGGCGGTGGCGCTGCGGGACGAGCGTCAGCGCTGGTTGGAGCGGGACAGCCGTGCCGGGTGGACCCGGCA CGTCATCCTCGTGGAGTCATATTGA
Upstream 100 bases:
>100_bases TCAGGTTGCCCAGCCTCCCCGGAAGTCGGTGGGGAACGGTGGATGGTGTACAACGCGGTAGATGGGCGGCTGCTTGGGGG ATGGCGCCCGAGGGGGCAGT
Downstream 100 bases:
>100_bases GCGCAGGCGGCCGCGCGGTGCGGCCGTCTACTGCGGAGTCCTCAGGTGCGTGTTGCCTCCCGGGAGCTGGAAATGATGGA ACGTGACAGTGGCGCTCACG
Product: TPR repeat-containing protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 914; Mature: 914
Protein sequence:
>914_residues MLKPAYDKVLVLALATPVLVLTVLLARTPSKGSGAPVSAQFWAERRSASRIEARLTHPEADRYRPRMSAGGCPVAPEPIP LRDLARLEEAGDLSGIASAYALQGEWNQAASFLERMPASPDRDSDLAAVYLARGSHEQALRLLDGVLKAQPKHAQAMWNR ALVLQAMGLTMKAADTFEQVALMGEPGWSREAKANAREQRDATMERARRWKEAREATLALVDDPQAPLPLEAARKDPGIV RQAFYEVVRAAPSKERVLALLPLAQELDRGHGGSALTDYVKRVSGRNFTRRGVLSREYASLVRGKLNQPDKLLERVLASG EDDLFLGTAQHTRATRRMFSQVVERAKRQNDPWFNLYIEREEAIRETAEGQWWKAEQRIFNALQRCREGGLSTRCVDLEL RLSILYADLQRLTEGEQHARTAWAWARQLREWDMEFTALEALAAITRSRGDFASSRAYVEEWSARGHVNCVWPRENLAHT YYLDNRMDDARREVDANAACKNEPLSLLFAVNLAELSRTRPKPGDEALLRQALTWANHSNPMPSDAVYARYVEGRFLLDS DRARGLALLRQTITEAEALPRGDSLAREAWALSYSSLVTDAGKAGEYTQALELMAAQLGTPVPQRCALAAAVHGERTVLV ARGTQGQVLGHYETDRQGPFIRADTSRLVPDRLREVLRGCERVDVLAWPPVFGHTDLLPPEVPWSFRLGRTAQPRTTPTA RRLVVSSVDAPALLQLPRLPQWLPSQEPEAVPLQVLSGSDATPARVLADMRDATEIEIHAHGIMDPALSDASLVVLSPET SGRYALTADVVRQQTLTGAPMVFLAACSAGRAASTTTSHEPFSLPAAFIDAGARAVLASTVDIPDAAGRFFDGVRRRIRE GAAPAVALRDERQRWLERDSRAGWTRHVILVESY
Sequences:
>Translated_914_residues MLKPAYDKVLVLALATPVLVLTVLLARTPSKGSGAPVSAQFWAERRSASRIEARLTHPEADRYRPRMSAGGCPVAPEPIP LRDLARLEEAGDLSGIASAYALQGEWNQAASFLERMPASPDRDSDLAAVYLARGSHEQALRLLDGVLKAQPKHAQAMWNR ALVLQAMGLTMKAADTFEQVALMGEPGWSREAKANAREQRDATMERARRWKEAREATLALVDDPQAPLPLEAARKDPGIV RQAFYEVVRAAPSKERVLALLPLAQELDRGHGGSALTDYVKRVSGRNFTRRGVLSREYASLVRGKLNQPDKLLERVLASG EDDLFLGTAQHTRATRRMFSQVVERAKRQNDPWFNLYIEREEAIRETAEGQWWKAEQRIFNALQRCREGGLSTRCVDLEL RLSILYADLQRLTEGEQHARTAWAWARQLREWDMEFTALEALAAITRSRGDFASSRAYVEEWSARGHVNCVWPRENLAHT YYLDNRMDDARREVDANAACKNEPLSLLFAVNLAELSRTRPKPGDEALLRQALTWANHSNPMPSDAVYARYVEGRFLLDS DRARGLALLRQTITEAEALPRGDSLAREAWALSYSSLVTDAGKAGEYTQALELMAAQLGTPVPQRCALAAAVHGERTVLV ARGTQGQVLGHYETDRQGPFIRADTSRLVPDRLREVLRGCERVDVLAWPPVFGHTDLLPPEVPWSFRLGRTAQPRTTPTA RRLVVSSVDAPALLQLPRLPQWLPSQEPEAVPLQVLSGSDATPARVLADMRDATEIEIHAHGIMDPALSDASLVVLSPET SGRYALTADVVRQQTLTGAPMVFLAACSAGRAASTTTSHEPFSLPAAFIDAGARAVLASTVDIPDAAGRFFDGVRRRIRE GAAPAVALRDERQRWLERDSRAGWTRHVILVESY >Mature_914_residues MLKPAYDKVLVLALATPVLVLTVLLARTPSKGSGAPVSAQFWAERRSASRIEARLTHPEADRYRPRMSAGGCPVAPEPIP LRDLARLEEAGDLSGIASAYALQGEWNQAASFLERMPASPDRDSDLAAVYLARGSHEQALRLLDGVLKAQPKHAQAMWNR ALVLQAMGLTMKAADTFEQVALMGEPGWSREAKANAREQRDATMERARRWKEAREATLALVDDPQAPLPLEAARKDPGIV RQAFYEVVRAAPSKERVLALLPLAQELDRGHGGSALTDYVKRVSGRNFTRRGVLSREYASLVRGKLNQPDKLLERVLASG EDDLFLGTAQHTRATRRMFSQVVERAKRQNDPWFNLYIEREEAIRETAEGQWWKAEQRIFNALQRCREGGLSTRCVDLEL RLSILYADLQRLTEGEQHARTAWAWARQLREWDMEFTALEALAAITRSRGDFASSRAYVEEWSARGHVNCVWPRENLAHT YYLDNRMDDARREVDANAACKNEPLSLLFAVNLAELSRTRPKPGDEALLRQALTWANHSNPMPSDAVYARYVEGRFLLDS DRARGLALLRQTITEAEALPRGDSLAREAWALSYSSLVTDAGKAGEYTQALELMAAQLGTPVPQRCALAAAVHGERTVLV ARGTQGQVLGHYETDRQGPFIRADTSRLVPDRLREVLRGCERVDVLAWPPVFGHTDLLPPEVPWSFRLGRTAQPRTTPTA RRLVVSSVDAPALLQLPRLPQWLPSQEPEAVPLQVLSGSDATPARVLADMRDATEIEIHAHGIMDPALSDASLVVLSPET SGRYALTADVVRQQTLTGAPMVFLAACSAGRAASTTTSHEPFSLPAAFIDAGARAVLASTVDIPDAAGRFFDGVRRRIRE GAAPAVALRDERQRWLERDSRAGWTRHVILVESY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 101287; Mature: 101287
Theoretical pI: Translated: 8.21; Mature: 8.21
Prosite motif: PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKPAYDKVLVLALATPVLVLTVLLARTPSKGSGAPVSAQFWAERRSASRIEARLTHPEA CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCH DRYRPRMSAGGCPVAPEPIPLRDLARLEEAGDLSGIASAYALQGEWNQAASFLERMPASP HHCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHCCCCC DRDSDLAAVYLARGSHEQALRLLDGVLKAQPKHAQAMWNRALVLQAMGLTMKAADTFEQV CCCCCCEEEEEECCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHH ALMGEPGWSREAKANAREQRDATMERARRWKEAREATLALVDDPQAPLPLEAARKDPGIV HHCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCHHHHCCCCHHH RQAFYEVVRAAPSKERVLALLPLAQELDRGHGGSALTDYVKRVSGRNFTRRGVLSREYAS HHHHHHHHHCCCCHHHEEHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHCCHHHHHHH LVRGKLNQPDKLLERVLASGEDDLFLGTAQHTRATRRMFSQVVERAKRQNDPWFNLYIER HHHCCCCCHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEH EEAIRETAEGQWWKAEQRIFNALQRCREGGLSTRCVDLELRLSILYADLQRLTEGEQHAR HHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHCCHHHHH TAWAWARQLREWDMEFTALEALAAITRSRGDFASSRAYVEEWSARGHVNCVWPRENLAHT HHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCEEEECCCCCCCEE YYLDNRMDDARREVDANAACKNEPLSLLFAVNLAELSRTRPKPGDEALLRQALTWANHSN EEECCCHHHHHHHHCCCCCCCCCCCEEEEEEEHHHHHCCCCCCCHHHHHHHHHHHHCCCC PMPSDAVYARYVEGRFLLDSDRARGLALLRQTITEAEALPRGDSLAREAWALSYSSLVTD CCCCHHHHHHHHCCEEEECCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHC AGKAGEYTQALELMAAQLGTPVPQRCALAAAVHGERTVLVARGTQGQVLGHYETDRQGPF CCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCEEEEEEECCCCCEEECCCCCCCCCE IRADTSRLVPDRLREVLRGCERVDVLAWPPVFGHTDLLPPEVPWSFRLGRTAQPRTTPTA EECCCHHCCHHHHHHHHHHHHHCCEEECCCCCCCCCCCCCCCCCCEECCCCCCCCCCHHH RRLVVSSVDAPALLQLPRLPQWLPSQEPEAVPLQVLSGSDATPARVLADMRDATEIEIHA HHHHHHCCCCCHHHHCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHCCCCEEEEEE HGIMDPALSDASLVVLSPETSGRYALTADVVRQQTLTGAPMVFLAACSAGRAASTTTSHE CCCCCCCCCCCEEEEECCCCCCCEEEEHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCC PFSLPAAFIDAGARAVLASTVDIPDAAGRFFDGVRRRIREGAAPAVALRDERQRWLERDS CCCCCHHHHHCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHC RAGWTRHVILVESY CCCCEEEEEEEECC >Mature Secondary Structure MLKPAYDKVLVLALATPVLVLTVLLARTPSKGSGAPVSAQFWAERRSASRIEARLTHPEA CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCH DRYRPRMSAGGCPVAPEPIPLRDLARLEEAGDLSGIASAYALQGEWNQAASFLERMPASP HHCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHCCCCC DRDSDLAAVYLARGSHEQALRLLDGVLKAQPKHAQAMWNRALVLQAMGLTMKAADTFEQV CCCCCCEEEEEECCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHH ALMGEPGWSREAKANAREQRDATMERARRWKEAREATLALVDDPQAPLPLEAARKDPGIV HHCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCHHHHCCCCHHH RQAFYEVVRAAPSKERVLALLPLAQELDRGHGGSALTDYVKRVSGRNFTRRGVLSREYAS HHHHHHHHHCCCCHHHEEHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHCCHHHHHHH LVRGKLNQPDKLLERVLASGEDDLFLGTAQHTRATRRMFSQVVERAKRQNDPWFNLYIER HHHCCCCCHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEH EEAIRETAEGQWWKAEQRIFNALQRCREGGLSTRCVDLELRLSILYADLQRLTEGEQHAR HHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHCCHHHHH TAWAWARQLREWDMEFTALEALAAITRSRGDFASSRAYVEEWSARGHVNCVWPRENLAHT HHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCEEEECCCCCCCEE YYLDNRMDDARREVDANAACKNEPLSLLFAVNLAELSRTRPKPGDEALLRQALTWANHSN EEECCCHHHHHHHHCCCCCCCCCCCEEEEEEEHHHHHCCCCCCCHHHHHHHHHHHHCCCC PMPSDAVYARYVEGRFLLDSDRARGLALLRQTITEAEALPRGDSLAREAWALSYSSLVTD CCCCHHHHHHHHCCEEEECCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHC AGKAGEYTQALELMAAQLGTPVPQRCALAAAVHGERTVLVARGTQGQVLGHYETDRQGPF CCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCEEEEEEECCCCCEEECCCCCCCCCE IRADTSRLVPDRLREVLRGCERVDVLAWPPVFGHTDLLPPEVPWSFRLGRTAQPRTTPTA EECCCHHCCHHHHHHHHHHHHHCCEEECCCCCCCCCCCCCCCCCCEECCCCCCCCCCHHH RRLVVSSVDAPALLQLPRLPQWLPSQEPEAVPLQVLSGSDATPARVLADMRDATEIEIHA HHHHHHCCCCCHHHHCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHCCCCEEEEEE HGIMDPALSDASLVVLSPETSGRYALTADVVRQQTLTGAPMVFLAACSAGRAASTTTSHE CCCCCCCCCCCEEEEECCCCCCCEEEEHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCC PFSLPAAFIDAGARAVLASTVDIPDAAGRFFDGVRRRIREGAAPAVALRDERQRWLERDS CCCCCHHHHHCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHC RAGWTRHVILVESY CCCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA