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The map label for this gene is 108757787

Identifier: 108757787

GI number: 108757787

Start: 1087051

End: 1087884

Strand: Direct

Name: 108757787

Synonym: MXAN_0947

Alternate gene names: NA

Gene position: 1087051-1087884 (Clockwise)

Preceding gene: 108760195

Following gene: 108757359

Centisome position: 11.89

GC content: 66.19

Gene sequence:

>834_bases
GTGAAGCCCATGTCAAGAACACCTACGTCAACTGCGACACGGCCAGCGTCGCCCCGCGCAAGCGGCTCCCGCTGCCGTCG
CCGGCGGTTCCTCCCCTGGTCGGGCCGGAGCATCCGAACGCCAGCCAGGTCCGCTGATCTCCAGGCCCGGGCAGGGTTTT
TCACCCTCCCGGGCATTTTTCTGTCCGGGTCCTTCTTTTTTTTCTTCTCAAGGATTGGACCGCTGCGCGTCTTTGACTGG
GTAACGCGCAGGCGCGCATGTGAGTGGGGCTGCATGTCCAACCTCTTCAACCGGGACCGGAGGCGCTTCGAAGCGTTCAT
CCGTCAGCATCGGCCCAGCCTTCTGGGGCTGGCCCGCCGGTTGTGTGCCCGCTCCAGCCTGGAGCCGGACGACCTCGTCC
AGGAGACCTTCGAGCGGGCGATGCCGGAGTTCGAGCATCTGAAGGACCGGACGGACTCCGCGGCGGCTGCGTGGCTGTGT
ACGACGATGACGAACCGCTTCCTGGACTACTGCCGCCGCCAGCGGACGGAGTCCCGGGGGATGCCACACCTGGCGCTGGT
CCAGGATTTGGCGGTGTCGCCGGAGGAGACCCAGGAGAACTGGGCGCTGGTGAGCACCGACGCCTTCCAGAAGGCCATCG
AGCGGTTGAAGCCGCACCTGCGTGACGCCTACCGCCTGCACGCGGAGGGCAAGCGCTACAACGCCATCGCCGAGCATTTC
AATGTTCCCGTGGGCACCGTGGGCAGTTGGCTCACCCTGGCCCGTAGGGATTTGAAGGAACTGCTGCTGCCCCAGGTGGC
GGTAGCCCGGGAGCAGGGGGCCACGAGCTCATGA

Upstream 100 bases:

>100_bases
TCATCCATGTCTAGCTTTCAGACCATCCCCAATCGCGAGGTGCGAGCGCTCATGACGCCCGTCGAATCCCTTATGGCCGG
TAGCTTGGATTCCGAGTCCG

Downstream 100 bases:

>100_bases
CGACGCCATGCACCAATCTGAACCTCTTCGTGGACGGAGAGCTGTCCGCTCCCGACGCGGAGGTCTTCCGCCAGCACCTG
GGGCGCTGCCCTGAATGCGA

Product: ECF subfamily RNA polymerase sigma factor

Products: NA

Alternate protein names: RNA Polymerase Sigma Factor

Number of amino acids: Translated: 277; Mature: 277

Protein sequence:

>277_residues
MKPMSRTPTSTATRPASPRASGSRCRRRRFLPWSGRSIRTPARSADLQARAGFFTLPGIFLSGSFFFFFSRIGPLRVFDW
VTRRRACEWGCMSNLFNRDRRRFEAFIRQHRPSLLGLARRLCARSSLEPDDLVQETFERAMPEFEHLKDRTDSAAAAWLC
TTMTNRFLDYCRRQRTESRGMPHLALVQDLAVSPEETQENWALVSTDAFQKAIERLKPHLRDAYRLHAEGKRYNAIAEHF
NVPVGTVGSWLTLARRDLKELLLPQVAVAREQGATSS

Sequences:

>Translated_277_residues
MKPMSRTPTSTATRPASPRASGSRCRRRRFLPWSGRSIRTPARSADLQARAGFFTLPGIFLSGSFFFFFSRIGPLRVFDW
VTRRRACEWGCMSNLFNRDRRRFEAFIRQHRPSLLGLARRLCARSSLEPDDLVQETFERAMPEFEHLKDRTDSAAAAWLC
TTMTNRFLDYCRRQRTESRGMPHLALVQDLAVSPEETQENWALVSTDAFQKAIERLKPHLRDAYRLHAEGKRYNAIAEHF
NVPVGTVGSWLTLARRDLKELLLPQVAVAREQGATSS
>Mature_277_residues
MKPMSRTPTSTATRPASPRASGSRCRRRRFLPWSGRSIRTPARSADLQARAGFFTLPGIFLSGSFFFFFSRIGPLRVFDW
VTRRRACEWGCMSNLFNRDRRRFEAFIRQHRPSLLGLARRLCARSSLEPDDLVQETFERAMPEFEHLKDRTDSAAAAWLC
TTMTNRFLDYCRRQRTESRGMPHLALVQDLAVSPEETQENWALVSTDAFQKAIERLKPHLRDAYRLHAEGKRYNAIAEHF
NVPVGTVGSWLTLARRDLKELLLPQVAVAREQGATSS

Specific function: Unknown

COG id: COG1595

COG function: function code K; DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31835; Mature: 31835

Theoretical pI: Translated: 11.45; Mature: 11.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPMSRTPTSTATRPASPRASGSRCRRRRFLPWSGRSIRTPARSADLQARAGFFTLPGIF
CCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCHHCCCHHHCCCCCCCHHH
LSGSFFFFFSRIGPLRVFDWVTRRRACEWGCMSNLFNRDRRRFEAFIRQHRPSLLGLARR
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
LCARSSLEPDDLVQETFERAMPEFEHLKDRTDSAAAAWLCTTMTNRFLDYCRRQRTESRG
HHHHCCCCHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
MPHLALVQDLAVSPEETQENWALVSTDAFQKAIERLKPHLRDAYRLHAEGKRYNAIAEHF
CCHHHHHHHHHCCCCHHCCCCEEECHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
NVPVGTVGSWLTLARRDLKELLLPQVAVAREQGATSS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MKPMSRTPTSTATRPASPRASGSRCRRRRFLPWSGRSIRTPARSADLQARAGFFTLPGIF
CCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCHHCCCHHHCCCCCCCHHH
LSGSFFFFFSRIGPLRVFDWVTRRRACEWGCMSNLFNRDRRRFEAFIRQHRPSLLGLARR
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
LCARSSLEPDDLVQETFERAMPEFEHLKDRTDSAAAAWLCTTMTNRFLDYCRRQRTESRG
HHHHCCCCHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
MPHLALVQDLAVSPEETQENWALVSTDAFQKAIERLKPHLRDAYRLHAEGKRYNAIAEHF
CCHHHHHHHHHCCCCHHCCCCEEECHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
NVPVGTVGSWLTLARRDLKELLLPQVAVAREQGATSS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA