| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is ald [H]
Identifier: 108760086
GI number: 108760086
Start: 5093233
End: 5094357
Strand: Direct
Name: ald [H]
Synonym: MXAN_4146
Alternate gene names: 108760086
Gene position: 5093233-5094357 (Clockwise)
Preceding gene: 108760541
Following gene: 108762328
Centisome position: 55.73
GC content: 68.44
Gene sequence:
>1125_bases GTGATCGTCGGAGTTCCCAAGGAGATCAAAACCCGCGAGTACCGCGTCGGCATGGTGCCTGCTGGCGCCGCCGCCCTCAT CGCCGCGGGTCACACGGTCCTGATCGAGACGAACGCCGGCGTTGGCTCCGGCATCCCCGATTCGGAGTACCAGCGCGTCG GCGCACAGATCATCTCCACCGCGGACGAGGTCTGGAAGCGCTCGGAGATGATCATCAAGGTCAAGGAGCCGATCGCGCCC GAATACGCGCGCATCCAGCCCGGCCAGATCATCTATACGTACTTCCACCTGGCCGGTGTGGACCCGGAGCTGACCAAGAC GCTGCTCCAGAAGAAGGCCGCGGCCGTGGCCTATGAAACGCTGCAGCCGGACGACGGCAGCCTGCCGCTGCTCAAGCCCA TGAGCGAGGTGGCCGGAAAGATGGCCATCCAGGTGGGCGCCAAGTGCCTGGAGCGGGCCCACGGCGGCAAGGGCATCCTC CTGGGCGGCGTGCCCGGCGTGCGCCGGGGCCGCGTCACCGTCATCGGCGGCGGCGTGGTGGGCCTGTGTGCCGCCAAGGT GGCGGTGGGCATGGGCGCCGAGGTCACCATCATCGACGTCAACATGGAGCGCCTCACCTACCTGGATGACGTGTTCCTCG GCCGCGTCGGCGTGCTGGCCTCCGACTCGGAGAGCATCTCCCGCTCCGTGCGCGAGGCCGACCTCGTCGTGGGCGCGGTG CTCATCCCCGGTCGCAAGGCCCCGAAGCTCGTCTCCGAGGCCCTCATCTCGGAGATGAGCCCGGGCTCCGTGGTGGTCGA CGTGGCGGTGGACCAGGGTGGCTGCATCGAGACGTGCAAGCCCACCACCCACGACAACCCCACGTTCGAGGTCCACGGCG TCGTCCACTACTGCGTCGCCAACATGCCCGGCGCCGTGCCGCAGACGTCCACCTACGCCCTCACCAACGTCACCCGCCCC TATTCGCTCCGGATCGCCAACGTGGGCCTGGCGGCGGCCGTGAAGGAGGACCGCGCCCTCGCGCGTGCGATGAACACCTA CAACGGCCACGTCACCTACGAGGCCGTCGCGAAAGACATGGGCTACGCCTACATGCCCATCGCGGACGCGCTCGCCGGCA AGTAA
Upstream 100 bases:
>100_bases CCAATGGCGCTCATACGGGGCTGTCCGCCCGCGCCTTGATTCCCCCTTGGGCCCTCGTTAGGGTCCGCGCGCTTTTTTAC GTCCCCTCTCGGAGGCAGTC
Downstream 100 bases:
>100_bases GCCCGGTAAGCAGGCAAACGATGCAGTCCCTGGCGGGGAGGTTCGGATGGCGACATCCGGCCTCCCCGCTCGTTATCTCT GCTAGGGAATATGTTTCCCT
Product: alanine dehydrogenase
Products: NA
Alternate protein names: Stage V sporulation protein N [H]
Number of amino acids: Translated: 374; Mature: 374
Protein sequence:
>374_residues MIVGVPKEIKTREYRVGMVPAGAAALIAAGHTVLIETNAGVGSGIPDSEYQRVGAQIISTADEVWKRSEMIIKVKEPIAP EYARIQPGQIIYTYFHLAGVDPELTKTLLQKKAAAVAYETLQPDDGSLPLLKPMSEVAGKMAIQVGAKCLERAHGGKGIL LGGVPGVRRGRVTVIGGGVVGLCAAKVAVGMGAEVTIIDVNMERLTYLDDVFLGRVGVLASDSESISRSVREADLVVGAV LIPGRKAPKLVSEALISEMSPGSVVVDVAVDQGGCIETCKPTTHDNPTFEVHGVVHYCVANMPGAVPQTSTYALTNVTRP YSLRIANVGLAAAVKEDRALARAMNTYNGHVTYEAVAKDMGYAYMPIADALAGK
Sequences:
>Translated_374_residues MIVGVPKEIKTREYRVGMVPAGAAALIAAGHTVLIETNAGVGSGIPDSEYQRVGAQIISTADEVWKRSEMIIKVKEPIAP EYARIQPGQIIYTYFHLAGVDPELTKTLLQKKAAAVAYETLQPDDGSLPLLKPMSEVAGKMAIQVGAKCLERAHGGKGIL LGGVPGVRRGRVTVIGGGVVGLCAAKVAVGMGAEVTIIDVNMERLTYLDDVFLGRVGVLASDSESISRSVREADLVVGAV LIPGRKAPKLVSEALISEMSPGSVVVDVAVDQGGCIETCKPTTHDNPTFEVHGVVHYCVANMPGAVPQTSTYALTNVTRP YSLRIANVGLAAAVKEDRALARAMNTYNGHVTYEAVAKDMGYAYMPIADALAGK >Mature_374_residues MIVGVPKEIKTREYRVGMVPAGAAALIAAGHTVLIETNAGVGSGIPDSEYQRVGAQIISTADEVWKRSEMIIKVKEPIAP EYARIQPGQIIYTYFHLAGVDPELTKTLLQKKAAAVAYETLQPDDGSLPLLKPMSEVAGKMAIQVGAKCLERAHGGKGIL LGGVPGVRRGRVTVIGGGVVGLCAAKVAVGMGAEVTIIDVNMERLTYLDDVFLGRVGVLASDSESISRSVREADLVVGAV LIPGRKAPKLVSEALISEMSPGSVVVDVAVDQGGCIETCKPTTHDNPTFEVHGVVHYCVANMPGAVPQTSTYALTNVTRP YSLRIANVGLAAAVKEDRALARAMNTYNGHVTYEAVAKDMGYAYMPIADALAGK
Specific function: This enzyme is a key factor in the assimilation of L- alanine as an energy source through the tricarboxylic acid cycle during sporulation [H]
COG id: COG0686
COG function: function code E; Alanine dehydrogenase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AlaDH/PNT family [H]
Homologues:
Organism=Homo sapiens, GI122939155, Length=352, Percent_Identity=30.3977272727273, Blast_Score=128, Evalue=8e-30, Organism=Homo sapiens, GI122939153, Length=352, Percent_Identity=30.3977272727273, Blast_Score=128, Evalue=8e-30, Organism=Escherichia coli, GI1787887, Length=346, Percent_Identity=30.0578034682081, Blast_Score=124, Evalue=1e-29, Organism=Caenorhabditis elegans, GI17550456, Length=373, Percent_Identity=29.7587131367292, Blast_Score=136, Evalue=1e-32,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007698 - InterPro: IPR008142 - InterPro: IPR008143 - InterPro: IPR007886 - InterPro: IPR008141 [H]
Pfam domain/function: PF01262 AlaDh_PNT_C; PF05222 AlaDh_PNT_N [H]
EC number: =1.4.1.1 [H]
Molecular weight: Translated: 39347; Mature: 39347
Theoretical pI: Translated: 7.16; Mature: 7.16
Prosite motif: PS00837 ALADH_PNT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIVGVPKEIKTREYRVGMVPAGAAALIAAGHTVLIETNAGVGSGIPDSEYQRVGAQIIST CCCCCCCHHCCCEEEEEECCCCHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHH ADEVWKRSEMIIKVKEPIAPEYARIQPGQIIYTYFHLAGVDPELTKTLLQKKAAAVAYET HHHHHCCCCEEEEECCCCCCCHHCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHH LQPDDGSLPLLKPMSEVAGKMAIQVGAKCLERAHGGKGILLGGVPGVRRGRVTVIGGGVV CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCEEEEEECCHH GLCAAKVAVGMGAEVTIIDVNMERLTYLDDVFLGRVGVLASDSESISRSVREADLVVGAV HHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHCEEECCHHHHHHHHHHHHHEEEEE LIPGRKAPKLVSEALISEMSPGSVVVDVAVDQGGCIETCKPTTHDNPTFEVHGVVHYCVA EECCCCCHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCEEEHHHHHHHHH NMPGAVPQTSTYALTNVTRPYSLRIANVGLAAAVKEDRALARAMNTYNGHVTYEAVAKDM CCCCCCCCCCEEEEEECCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHC GYAYMPIADALAGK CEEEECHHHHHCCC >Mature Secondary Structure MIVGVPKEIKTREYRVGMVPAGAAALIAAGHTVLIETNAGVGSGIPDSEYQRVGAQIIST CCCCCCCHHCCCEEEEEECCCCHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHH ADEVWKRSEMIIKVKEPIAPEYARIQPGQIIYTYFHLAGVDPELTKTLLQKKAAAVAYET HHHHHCCCCEEEEECCCCCCCHHCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHH LQPDDGSLPLLKPMSEVAGKMAIQVGAKCLERAHGGKGILLGGVPGVRRGRVTVIGGGVV CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCEEEEEECCHH GLCAAKVAVGMGAEVTIIDVNMERLTYLDDVFLGRVGVLASDSESISRSVREADLVVGAV HHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHCEEECCHHHHHHHHHHHHHEEEEE LIPGRKAPKLVSEALISEMSPGSVVVDVAVDQGGCIETCKPTTHDNPTFEVHGVVHYCVA EECCCCCHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCEEEHHHHHHHHH NMPGAVPQTSTYALTNVTRPYSLRIANVGLAAAVKEDRALARAMNTYNGHVTYEAVAKDM CCCCCCCCCCEEEEEECCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHC GYAYMPIADALAGK CEEEECHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8226620; 9384377 [H]