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The map label for this gene is ybgL [C]

Identifier: 108760039

GI number: 108760039

Start: 1841093

End: 1842391

Strand: Reverse

Name: ybgL [C]

Synonym: MXAN_1568

Alternate gene names: 108760039

Gene position: 1842391-1841093 (Counterclockwise)

Preceding gene: 108761768

Following gene: 108757608

Centisome position: 20.16

GC content: 73.06

Gene sequence:

>1299_bases
GTGCGCCGCATGACGGAGTGCCTCCTCAACGTCGACCTGGGTGAGCTTCCTGGTGAAGACGAACAGCTCTACGCGCTGGC
CCATGTGGCGAACATCGCTTGCGGCGGGCATGCCGGGGACGATGCCTCCATGCGCCGGGCGCTGGAGCGGTGCGAGCGGC
ACGGCACGCGCGTGGGCGCGCACCCGTCCTACGAGGACCGAGAGGGCTTCGGCCGCCGCGCGCTCGACGTCACGCCGGAG
CACCTCCGGGCGCAAGTGGCCGCGCAGTGCGGCCGGCTCGCAAAGCTGGCGGCTGACCGTCATCTGCCCGTGGCGTACGC
CAAGCCCCACGGCGCCCTGTACCACGCGGCCAATGCAACACCGGCCCTGGCCCGCGCGGTGGTGGCGGGCATCGTGGAAG
CGCTGGGGACCGCCGTCACCTTCATTGGCCCCGGCACGGGCGCGCTGCACGACGCGGCCCTGGCGGCGGGTCTGGCCTAC
GCCCGCGAAGGCTTCGCGGACCGAGGCACCCGGCCAGACGGCTCGCTGATTCCCCGAGGACAGCCCGGCGCGGTGCTGAC
CGACCACGCCCAGGCGCGGGCCAACACCGTGCGCCTGGCCACCAGCGGCAGCGTGGACACCGTCTGCGTTCACGGCGACA
CGCCCGGCGCGGTGGAGCTGGCGCGCGAGGTCCGCGCCACCTTGGACGCGCTCGCGCTTCGCGCCGAGCCTCTGGGTGAA
GGCGCCCTGCGACTGGTCCTTCCCGAGGGACTGGAGCGACGCGCCACGCGCGAGGCCCTCTGTGCCATGCCCGGCGTCCT
CGACGCCGTCATCACCGAGGAGCACGCCTGCGTGTACTTCGCCCCGGATGCGCCACCCGAGGAGCCTCGGCTCGCGCTGG
CGCGGTTGCTGCGCATCCCCGCCCCAGTGGCCGGCCGGCCCCTCACGACCATCTCCGTGCGCTACGACGGGCAGGACTTG
CACGCAGTGGCGGAACGCGCGGGCCTCACCGAGGACGAAGTGGCGCGGCGCCACACCGCGCGCGAGTACACGGTGCGCTG
CGTGGGATTCCTCCCCGGGTTTGCCTATCTGGGCGAAGTCGACCCGAGCATCGCGGTCCCCAGGCTGGCCACGCCCCGCA
CGCGAGTGCCTGCCCTCGCGGTGGGAATCGCGGGTGGGCGCACGGGGGTGTATCCCTTCGCATCACCTGGAGGCTGGAAC
CTCATCGGCACCGCGCTGGACTTCACCGCCTTCACACCCGAGGAGGGCTCGGTGCTTCAGCTCGGGGACCGGGTGCGCTT
CAAGCGGGTGGACCGATGA

Upstream 100 bases:

>100_bases
GCCCCGGGGTGGTGCGTGGGACTTCCCAGCGCACCGTCGGCTGGCACGCCAGCGTCTCCGGCTACAGGGACGGCTGCACC
CGCGCCGCCGCTCGCGTACG

Downstream 100 bases:

>100_bases
CGGGCTGGCTGGACATCACGGGCGTGGGTGCGCCCGTCACGGTGCAGGACGCGGGACGGCCGGGGAAGATGCACCACGGC
GTGCCTCCGGGAGGACCGCT

Product: LamB/YcsF family/allophanate hydrolase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 432; Mature: 432

Protein sequence:

>432_residues
MRRMTECLLNVDLGELPGEDEQLYALAHVANIACGGHAGDDASMRRALERCERHGTRVGAHPSYEDREGFGRRALDVTPE
HLRAQVAAQCGRLAKLAADRHLPVAYAKPHGALYHAANATPALARAVVAGIVEALGTAVTFIGPGTGALHDAALAAGLAY
AREGFADRGTRPDGSLIPRGQPGAVLTDHAQARANTVRLATSGSVDTVCVHGDTPGAVELAREVRATLDALALRAEPLGE
GALRLVLPEGLERRATREALCAMPGVLDAVITEEHACVYFAPDAPPEEPRLALARLLRIPAPVAGRPLTTISVRYDGQDL
HAVAERAGLTEDEVARRHTAREYTVRCVGFLPGFAYLGEVDPSIAVPRLATPRTRVPALAVGIAGGRTGVYPFASPGGWN
LIGTALDFTAFTPEEGSVLQLGDRVRFKRVDR

Sequences:

>Translated_432_residues
MRRMTECLLNVDLGELPGEDEQLYALAHVANIACGGHAGDDASMRRALERCERHGTRVGAHPSYEDREGFGRRALDVTPE
HLRAQVAAQCGRLAKLAADRHLPVAYAKPHGALYHAANATPALARAVVAGIVEALGTAVTFIGPGTGALHDAALAAGLAY
AREGFADRGTRPDGSLIPRGQPGAVLTDHAQARANTVRLATSGSVDTVCVHGDTPGAVELAREVRATLDALALRAEPLGE
GALRLVLPEGLERRATREALCAMPGVLDAVITEEHACVYFAPDAPPEEPRLALARLLRIPAPVAGRPLTTISVRYDGQDL
HAVAERAGLTEDEVARRHTAREYTVRCVGFLPGFAYLGEVDPSIAVPRLATPRTRVPALAVGIAGGRTGVYPFASPGGWN
LIGTALDFTAFTPEEGSVLQLGDRVRFKRVDR
>Mature_432_residues
MRRMTECLLNVDLGELPGEDEQLYALAHVANIACGGHAGDDASMRRALERCERHGTRVGAHPSYEDREGFGRRALDVTPE
HLRAQVAAQCGRLAKLAADRHLPVAYAKPHGALYHAANATPALARAVVAGIVEALGTAVTFIGPGTGALHDAALAAGLAY
AREGFADRGTRPDGSLIPRGQPGAVLTDHAQARANTVRLATSGSVDTVCVHGDTPGAVELAREVRATLDALALRAEPLGE
GALRLVLPEGLERRATREALCAMPGVLDAVITEEHACVYFAPDAPPEEPRLALARLLRIPAPVAGRPLTTISVRYDGQDL
HAVAERAGLTEDEVARRHTAREYTVRCVGFLPGFAYLGEVDPSIAVPRLATPRTRVPALAVGIAGGRTGVYPFASPGGWN
LIGTALDFTAFTPEEGSVLQLGDRVRFKRVDR

Specific function: Unknown

COG id: COG1540

COG function: function code R; Uncharacterized proteins, homologs of lactam utilization protein B

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0271 (lamB) family [H]

Homologues:

Organism=Escherichia coli, GI1786931, Length=232, Percent_Identity=39.6551724137931, Blast_Score=146, Evalue=3e-36,
Organism=Escherichia coli, GI1786929, Length=112, Percent_Identity=49.1071428571429, Blast_Score=101, Evalue=9e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011330
- InterPro:   IPR005501 [H]

Pfam domain/function: PF03746 LamB_YcsF [H]

EC number: NA

Molecular weight: Translated: 45728; Mature: 45728

Theoretical pI: Translated: 6.88; Mature: 6.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRMTECLLNVDLGELPGEDEQLYALAHVANIACGGHAGDDASMRRALERCERHGTRVGA
CCHHHHHHHCCCHHCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCC
HPSYEDREGFGRRALDVTPEHLRAQVAAQCGRLAKLAADRHLPVAYAKPHGALYHAANAT
CCCCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEECCCCC
PALARAVVAGIVEALGTAVTFIGPGTGALHDAALAAGLAYAREGFADRGTRPDGSLIPRG
HHHHHHHHHHHHHHHHCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
QPGAVLTDHAQARANTVRLATSGSVDTVCVHGDTPGAVELAREVRATLDALALRAEPLGE
CCCCEEECCHHHCCCEEEEEECCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCC
GALRLVLPEGLERRATREALCAMPGVLDAVITEEHACVYFAPDAPPEEPRLALARLLRIP
CCEEEECCCCHHHHHHHHHHHHCCHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHCC
APVAGRPLTTISVRYDGQDLHAVAERAGLTEDEVARRHTAREYTVRCVGFLPGFAYLGEV
CCCCCCCEEEEEEEECCCHHHHHHHHCCCCHHHHHHHHHHHHHHEEEEECCCCHHHHCCC
DPSIAVPRLATPRTRVPALAVGIAGGRTGVYPFASPGGWNLIGTALDFTAFTPEEGSVLQ
CCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCEEEHEEECEEECCCCCCEEE
LGDRVRFKRVDR
ECCCHHHHCCCC
>Mature Secondary Structure
MRRMTECLLNVDLGELPGEDEQLYALAHVANIACGGHAGDDASMRRALERCERHGTRVGA
CCHHHHHHHCCCHHCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCC
HPSYEDREGFGRRALDVTPEHLRAQVAAQCGRLAKLAADRHLPVAYAKPHGALYHAANAT
CCCCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEECCCCC
PALARAVVAGIVEALGTAVTFIGPGTGALHDAALAAGLAYAREGFADRGTRPDGSLIPRG
HHHHHHHHHHHHHHHHCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
QPGAVLTDHAQARANTVRLATSGSVDTVCVHGDTPGAVELAREVRATLDALALRAEPLGE
CCCCEEECCHHHCCCEEEEEECCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCC
GALRLVLPEGLERRATREALCAMPGVLDAVITEEHACVYFAPDAPPEEPRLALARLLRIP
CCEEEECCCCHHHHHHHHHHHHCCHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHCC
APVAGRPLTTISVRYDGQDLHAVAERAGLTEDEVARRHTAREYTVRCVGFLPGFAYLGEV
CCCCCCCEEEEEEEECCCHHHHHHHHCCCCHHHHHHHHHHHHHHEEEEECCCCHHHHCCC
DPSIAVPRLATPRTRVPALAVGIAGGRTGVYPFASPGGWNLIGTALDFTAFTPEEGSVLQ
CCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCEEEHEEECEEECCCCCCEEE
LGDRVRFKRVDR
ECCCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9679194 [H]