Click here to switch to the map view.

The map label for this gene is ybgK [H]

Identifier: 108757608

GI number: 108757608

Start: 1840203

End: 1841096

Strand: Reverse

Name: ybgK [H]

Synonym: MXAN_1567

Alternate gene names: 108757608

Gene position: 1841096-1840203 (Counterclockwise)

Preceding gene: 108760039

Following gene: 108762118

Centisome position: 20.14

GC content: 71.59

Gene sequence:

>894_bases
ATGACGGGCTGGCTGGACATCACGGGCGTGGGTGCGCCCGTCACGGTGCAGGACGCGGGACGGCCGGGGAAGATGCACCA
CGGCGTGCCTCCGGGAGGACCGCTGGTCCCGGAGCTGCTCGCCCTGGCCAATCTCGCCGTGGGCAACGCGAGTGGAACGG
CGGCGCTGGAAGCCTTCGGTCGGTTGGAGCTGCGCGCCCGAGGCCGAAGCGTTCGCGTGTCCATGGGCGGACACGCCTTC
GCGCTGGCGGATGGAGAGCGCCTCACCGTCCCCGCGCCCGAGTCGACGAGCGTGCGCTATGTCGCGGTGGACGGCGGGCT
CGCCGTGCCGGAAGTGCTGGGAGGACGCGGCACACTGCTGGTCGCGCGCCTGGGCGGACACGAAGGCCGCCTGCTGCGTT
CGGGAGACAGCCTGCCCCTGGGTGACACGAACGAGCGCGCCGAGGCACGAGCGCCCGGTGCGTCACTGGATGCAGCGGCG
CCCATCCGCGTGACGCTCGGACCGGACAACCGCCGCTTCGGACCCGCAACCGTGGCCACCCTGCTGTCGGGCGCCTTCAC
CGTGTCCGCCGCCACCGACCGTGTGGGGATGCGGCTCCAAGGGCCATCGCTCACCCATGGCGACGAAGGCACGGGCACGT
CGCGCCCCATGGTTCGTGGGGCCATCCAGGTGACGCTTTCAGGAACGCCCATCGTGCTGGGCCCCGACCATCCGACGACA
GGTGGCTATCCACTCATCGCGACAGTCATTCGCGCCGATTGGGGACGGCTGTGCGCCCGCCGTCCAGGAGCCGCTGTCCG
GTTCCAGGAAGTGAGCCTGGAAGAGGCACGGGAAGCGTGGCGGCACCACGCGGAGCACTTCGGTGTCGGTGGAAGGCCGA
CCCCGCCCCCCTGA

Upstream 100 bases:

>100_bases
GGAACCTCATCGGCACCGCGCTGGACTTCACCGCCTTCACACCCGAGGAGGGCTCGGTGCTTCAGCTCGGGGACCGGGTG
CGCTTCAAGCGGGTGGACCG

Downstream 100 bases:

>100_bases
GTTCCAGCATCCAGGGGACGCAACTTTTTCCGGTTTCAACCGATACTGGAGAAGATGAGTCCCCCAAAAATCGGTTTCCG
CGCCCCCGCCCGTCCCACCG

Product: urea amidolyase-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 297; Mature: 296

Protein sequence:

>297_residues
MTGWLDITGVGAPVTVQDAGRPGKMHHGVPPGGPLVPELLALANLAVGNASGTAALEAFGRLELRARGRSVRVSMGGHAF
ALADGERLTVPAPESTSVRYVAVDGGLAVPEVLGGRGTLLVARLGGHEGRLLRSGDSLPLGDTNERAEARAPGASLDAAA
PIRVTLGPDNRRFGPATVATLLSGAFTVSAATDRVGMRLQGPSLTHGDEGTGTSRPMVRGAIQVTLSGTPIVLGPDHPTT
GGYPLIATVIRADWGRLCARRPGAAVRFQEVSLEEAREAWRHHAEHFGVGGRPTPPP

Sequences:

>Translated_297_residues
MTGWLDITGVGAPVTVQDAGRPGKMHHGVPPGGPLVPELLALANLAVGNASGTAALEAFGRLELRARGRSVRVSMGGHAF
ALADGERLTVPAPESTSVRYVAVDGGLAVPEVLGGRGTLLVARLGGHEGRLLRSGDSLPLGDTNERAEARAPGASLDAAA
PIRVTLGPDNRRFGPATVATLLSGAFTVSAATDRVGMRLQGPSLTHGDEGTGTSRPMVRGAIQVTLSGTPIVLGPDHPTT
GGYPLIATVIRADWGRLCARRPGAAVRFQEVSLEEAREAWRHHAEHFGVGGRPTPPP
>Mature_296_residues
TGWLDITGVGAPVTVQDAGRPGKMHHGVPPGGPLVPELLALANLAVGNASGTAALEAFGRLELRARGRSVRVSMGGHAFA
LADGERLTVPAPESTSVRYVAVDGGLAVPEVLGGRGTLLVARLGGHEGRLLRSGDSLPLGDTNERAEARAPGASLDAAAP
IRVTLGPDNRRFGPATVATLLSGAFTVSAATDRVGMRLQGPSLTHGDEGTGTSRPMVRGAIQVTLSGTPIVLGPDHPTTG
GYPLIATVIRADWGRLCARRPGAAVRFQEVSLEEAREAWRHHAEHFGVGGRPTPPP

Specific function: Unknown

COG id: COG1984

COG function: function code E; Allophanate hydrolase subunit 2

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis ycsJ and yeast urea amidolyase (DUR1,2) [H]

Homologues:

Organism=Escherichia coli, GI1786930, Length=298, Percent_Identity=34.5637583892617, Blast_Score=137, Evalue=9e-34,
Organism=Saccharomyces cerevisiae, GI6319685, Length=310, Percent_Identity=28.7096774193548, Blast_Score=97, Evalue=3e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003778 [H]

Pfam domain/function: PF02626 AHS2 [H]

EC number: NA

Molecular weight: Translated: 30571; Mature: 30440

Theoretical pI: Translated: 9.98; Mature: 9.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGWLDITGVGAPVTVQDAGRPGKMHHGVPPGGPLVPELLALANLAVGNASGTAALEAFG
CCCEEEEECCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHH
RLELRARGRSVRVSMGGHAFALADGERLTVPAPESTSVRYVAVDGGLAVPEVLGGRGTLL
CEEEEECCCEEEEEECCEEEEEECCCEEEECCCCCCCEEEEEECCCCCCHHHHCCCCEEE
VARLGGHEGRLLRSGDSLPLGDTNERAEARAPGASLDAAAPIRVTLGPDNRRFGPATVAT
EEEECCCCCEEEECCCCCCCCCCCCCHHHCCCCCCCCCCCCEEEEECCCCCCCCHHHHHH
LLSGAFTVSAATDRVGMRLQGPSLTHGDEGTGTSRPMVRGAIQVTLSGTPIVLGPDHPTT
HHHCCEEEEECCCCCCEEECCCCCCCCCCCCCCCCCEEEEEEEEEECCCEEEECCCCCCC
GGYPLIATVIRADWGRLCARRPGAAVRFQEVSLEEAREAWRHHAEHFGVGGRPTPPP
CCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
TGWLDITGVGAPVTVQDAGRPGKMHHGVPPGGPLVPELLALANLAVGNASGTAALEAFG
CCEEEEECCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHH
RLELRARGRSVRVSMGGHAFALADGERLTVPAPESTSVRYVAVDGGLAVPEVLGGRGTLL
CEEEEECCCEEEEEECCEEEEEECCCEEEECCCCCCCEEEEEECCCCCCHHHHCCCCEEE
VARLGGHEGRLLRSGDSLPLGDTNERAEARAPGASLDAAAPIRVTLGPDNRRFGPATVAT
EEEECCCCCEEEECCCCCCCCCCCCCHHHCCCCCCCCCCCCEEEEECCCCCCCCHHHHHH
LLSGAFTVSAATDRVGMRLQGPSLTHGDEGTGTSRPMVRGAIQVTLSGTPIVLGPDHPTT
HHHCCEEEEECCCCCCEEECCCCCCCCCCCCCCCCCEEEEEEEEEECCCEEEECCCCCCC
GGYPLIATVIRADWGRLCARRPGAAVRFQEVSLEEAREAWRHHAEHFGVGGRPTPPP
CCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]