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The map label for this gene is scpB [H]

Identifier: 108760008

GI number: 108760008

Start: 4618724

End: 4619713

Strand: Reverse

Name: scpB [H]

Synonym: MXAN_3840

Alternate gene names: 108760008

Gene position: 4619713-4618724 (Counterclockwise)

Preceding gene: 108763535

Following gene: 108759403

Centisome position: 50.55

GC content: 67.17

Gene sequence:

>990_bases
GTGACTACCGGTAGCAACGGACCGCAGGACGAGACTCCCGAACCGGGCACGCCCGGTGGCCCCGGCCCGTTCTCCGAAGA
GGAAATCGCTGCTGTCACGGGCCCCGGCCCGGCGGATGAGCTGGACGAGTTGGAAGCGGCCTCCATCGAGGAGGACTCGG
ACGAGGCGCCTCCGGATCTGGAGACGTCGTTCGAGAAGCTCCTCTCCAAGAGCCGCAAGCTGTCCACGGACCGCATCCGC
ACCGTCATCGAGAGCGTGCTCTTCGTGGCGGAGCGGCCGCTGTCGGTGGACGAGCTGTACATGGCCACCGGCATCGAGCG
GGAGCTCATCGCCGAGGCCCTCAACCAACTCTCCGGCATTCACCGCGACGGCATCAGCGGCATCGTGCTGTATGAGGTGG
CGGGCGGGTGGCAGTTCCGGACGGACCCGCATTCGGGTGAATATGTCCGGCGTTACCTGCGGGTGAAGCCACAGCGGCTG
ACCCGGGCGGCGGTGGAGACGCTGGCCATCATCGCGTACCGGCAGCCGGTGACCCGGCCAGAAATCGAGGACATCCGCGG
CGTGGACTGCGGCGCGGTCATCAAGGCGTTGATGGACCGCAAGCTGGTGAAGATCCTGGGCAAGCGTGAAGAAGTGGGGC
GGCCCATCCTCTATGGGACGTCGCGCGAGTTCCTGGAGTTCTTCGCACTGAAGGACCTGTCGGCCCTGCCCACGCTGCGT
GAGTTCCACGAGCTGACGCAGGAGCACCGAGAGATCGTCGAGAAGGAAGACAAGCCGGCGCCCCCGGCTGCGGGGACGGT
GGAAGCGCTGTCGGACCCGGCATTCACGAAGCGGATGGAGAAGAGCGCGGCGGCCAGTGAAGCCGCGCTGGAGGACCTGG
AAGAGGCCATGGCGGCCGCGGACCGGACACAAAAGGTCAGCTCCAGCGTCCTGGACACGACGCCCCCGGAACCCGAGACG
GGTGATACGACGGGGCCCAAGCCCGAGTGA

Upstream 100 bases:

>100_bases
CGGCTCATCCGGGTGGTGCAGGACGAGCCGCTGGGGCCCATCTTGCTGCTGCCCAACGGGGACGCGCTGGAGAAGCTGGC
TCCCACGGAGGTCGACGACA

Downstream 100 bases:

>100_bases
CGGGCAGCATGGAAGAAGGATGGTATGGCGGCCGAACGACTACAGAAGTACCTGGCCCGCGCGGGAGTTGCTTCGCGCCG
GCATGCAGAAGAGCTGATTA

Product: segregation and condensation protein B

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 329; Mature: 328

Protein sequence:

>329_residues
MTTGSNGPQDETPEPGTPGGPGPFSEEEIAAVTGPGPADELDELEAASIEEDSDEAPPDLETSFEKLLSKSRKLSTDRIR
TVIESVLFVAERPLSVDELYMATGIERELIAEALNQLSGIHRDGISGIVLYEVAGGWQFRTDPHSGEYVRRYLRVKPQRL
TRAAVETLAIIAYRQPVTRPEIEDIRGVDCGAVIKALMDRKLVKILGKREEVGRPILYGTSREFLEFFALKDLSALPTLR
EFHELTQEHREIVEKEDKPAPPAAGTVEALSDPAFTKRMEKSAAASEAALEDLEEAMAAADRTQKVSSSVLDTTPPEPET
GDTTGPKPE

Sequences:

>Translated_329_residues
MTTGSNGPQDETPEPGTPGGPGPFSEEEIAAVTGPGPADELDELEAASIEEDSDEAPPDLETSFEKLLSKSRKLSTDRIR
TVIESVLFVAERPLSVDELYMATGIERELIAEALNQLSGIHRDGISGIVLYEVAGGWQFRTDPHSGEYVRRYLRVKPQRL
TRAAVETLAIIAYRQPVTRPEIEDIRGVDCGAVIKALMDRKLVKILGKREEVGRPILYGTSREFLEFFALKDLSALPTLR
EFHELTQEHREIVEKEDKPAPPAAGTVEALSDPAFTKRMEKSAAASEAALEDLEEAMAAADRTQKVSSSVLDTTPPEPET
GDTTGPKPE
>Mature_328_residues
TTGSNGPQDETPEPGTPGGPGPFSEEEIAAVTGPGPADELDELEAASIEEDSDEAPPDLETSFEKLLSKSRKLSTDRIRT
VIESVLFVAERPLSVDELYMATGIERELIAEALNQLSGIHRDGISGIVLYEVAGGWQFRTDPHSGEYVRRYLRVKPQRLT
RAAVETLAIIAYRQPVTRPEIEDIRGVDCGAVIKALMDRKLVKILGKREEVGRPILYGTSREFLEFFALKDLSALPTLRE
FHELTQEHREIVEKEDKPAPPAAGTVEALSDPAFTKRMEKSAAASEAALEDLEEAMAAADRTQKVSSSVLDTTPPEPETG
DTTGPKPE

Specific function: Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing smc and scpA that pull DNA away from mid-cell into both cell halves [H]

COG id: COG1386

COG function: function code K; Predicted transcriptional regulator containing the HTH domain

Gene ontology:

Cell location: Cytoplasm. Note=Associated with two foci at the outer edges of the nucleoid region in young cells, and at four foci within both cell halves in older cells (By similarity) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the scpB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005234
- InterPro:   IPR011991 [H]

Pfam domain/function: PF04079 DUF387 [H]

EC number: NA

Molecular weight: Translated: 35950; Mature: 35818

Theoretical pI: Translated: 4.34; Mature: 4.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTGSNGPQDETPEPGTPGGPGPFSEEEIAAVTGPGPADELDELEAASIEEDSDEAPPDL
CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCH
ETSFEKLLSKSRKLSTDRIRTVIESVLFVAERPLSVDELYMATGIERELIAEALNQLSGI
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHH
HRDGISGIVLYEVAGGWQFRTDPHSGEYVRRYLRVKPQRLTRAAVETLAIIAYRQPVTRP
HHCCCCCEEEEEECCCEEECCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCC
EIEDIRGVDCGAVIKALMDRKLVKILGKREEVGRPILYGTSREFLEFFALKDLSALPTLR
CHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHCCCEEECCHHHHHHHHHHHHHHHCHHHH
EFHELTQEHREIVEKEDKPAPPAAGTVEALSDPAFTKRMEKSAAASEAALEDLEEAMAAA
HHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DRTQKVSSSVLDTTPPEPETGDTTGPKPE
HHHHHHHHHHHCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TTGSNGPQDETPEPGTPGGPGPFSEEEIAAVTGPGPADELDELEAASIEEDSDEAPPDL
CCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCH
ETSFEKLLSKSRKLSTDRIRTVIESVLFVAERPLSVDELYMATGIERELIAEALNQLSGI
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHH
HRDGISGIVLYEVAGGWQFRTDPHSGEYVRRYLRVKPQRLTRAAVETLAIIAYRQPVTRP
HHCCCCCEEEEEECCCEEECCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCC
EIEDIRGVDCGAVIKALMDRKLVKILGKREEVGRPILYGTSREFLEFFALKDLSALPTLR
CHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHCCCEEECCHHHHHHHHHHHHHHHCHHHH
EFHELTQEHREIVEKEDKPAPPAAGTVEALSDPAFTKRMEKSAAASEAALEDLEEAMAAA
HHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DRTQKVSSSVLDTTPPEPETGDTTGPKPE
HHHHHHHHHHHCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA