| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
Click here to switch to the map view.
The map label for this gene is ag45 [H]
Identifier: 108759911
GI number: 108759911
Start: 4609134
End: 4610393
Strand: Direct
Name: ag45 [H]
Synonym: MXAN_3834
Alternate gene names: 108759911
Gene position: 4609134-4610393 (Clockwise)
Preceding gene: 108763416
Following gene: 108762290
Centisome position: 50.43
GC content: 68.97
Gene sequence:
>1260_bases GTGTGCCGCGCCGTGGCCCTCGCCATCTTCCTGTTCACCTACGTCTTCATCGCCGGTGCGCGCCTTCCGTACCTGAAGCT GGACCGCCCCGGGGGCGCGCTGCTGGGGGCCGTGCTGATGGTCGTCTTCGGCGTCGTCACTCCGGCCGAGGTCTTCAACC ACAGCGCCGACGCGAACCGTCACGCCATCGACGCGGACACCATCGTCCTCCTGCTGGGGATGATGCTGCTGGCGGCGTAC ATGTCCCAGGCGTCCTTCTTCCGCACCGCGGGCGCGTGGGCCGTGCGCAGGGCGCACACGCCCCGGCGGTTGCTGCTCGC CGTGACGTTCATTTCGGCCGCGCTGTCCGCGTTCCTGGTGAATGACACCGTGTGTTTGATGCTCACGCCCCTGGTGCTGG CCACCGTGGAGGACGCGCGCCTGCCGCCGGCTCCGTACCTGCTCGCGGTGTGCATGGGCAGCAACAGCGGCTCGGTGGCG ACCTTCACCGGCAACCCGCAGAACATGCTCATCCAGGGCGCCTCCGGGCTGTCCTACGCCAGCTTCGCGGCGTACATGGC CCTGCCTGCCCTGCTCTCCACAGCGGTGGTCGCCGCCGGACTCCTGTATCTGTTCCGGCATGACCTGCCCGTGAAGCAAT TCGAGCCCAACCCTCCACCTCCGCCCGTGGACCGGGGCCTGTTGGTGCTCACCTTGACGGTGCTATCCGGGGTTGTCGTG GCCTTCTTCGCCGGGCTGCCCATGAGCTGGAGCGCCCTGGCCGGCGCGGCCCTGGTGATGGCCCTGGCGCGCCGCGAGCC ACGCGAGGCGCTGGAGCGCGTGGACTGGGTGCTGCTGCTCTTCTTCGCGAGCCTGTTCGTGGTCGTCTATGGCGTGAACA AGCACGGCTACGCGGAGGACATCCGCGTCCTGTTCGAGCCCCTCATGGCGGGTCCGCCCCTTAGGGAGACGCTGGGCTTC GCGGGGCTGACGCTGGTGGCGTCCAACCTGTTCAGCAACGTGCCCTTCGTCATGCTGGCGCGGACGTGGGTGCCCACGCT GCACGACGTGGAGCTGGGCTGGCACGTGCTCGCGCTGGGCTCCACGCTGGCGGGCAACCTCACGCTGGTGGGAAGCGTGG CCAACCTCATCGTGTTCGAGGCCGCGCGCGGGAAGGTCAACATGAGCTTCCTCCGCTTCCTCCGCGTGGGCCTCCCGGTG ACGCTCGTCAGCTTCGTCGTGGGGCTGAGCGTGCTCCTGGTGGAGCACGCGCTGTTCTGA
Upstream 100 bases:
>100_bases ACTGTACAGACGTATACCGAGGCAAACAACGCGGGAGCGCACCTCATTGGTTTGAGCTCCAGCCAATACGCGCAGAGGCG GACGTGCGGGCACTCCACTA
Downstream 100 bases:
>100_bases ATCAGGCCGTGTGACTCAGGGGTCGGGGTCCGGCAGCTCGCCGGGCGCCAGCTCGTCTTCCGGAGGCTTCGTCGCCTCGG GTGCCGGAGCCGGGGCGCCC
Product: arsenical pump membrane protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 419; Mature: 419
Protein sequence:
>419_residues MCRAVALAIFLFTYVFIAGARLPYLKLDRPGGALLGAVLMVVFGVVTPAEVFNHSADANRHAIDADTIVLLLGMMLLAAY MSQASFFRTAGAWAVRRAHTPRRLLLAVTFISAALSAFLVNDTVCLMLTPLVLATVEDARLPPAPYLLAVCMGSNSGSVA TFTGNPQNMLIQGASGLSYASFAAYMALPALLSTAVVAAGLLYLFRHDLPVKQFEPNPPPPPVDRGLLVLTLTVLSGVVV AFFAGLPMSWSALAGAALVMALARREPREALERVDWVLLLFFASLFVVVYGVNKHGYAEDIRVLFEPLMAGPPLRETLGF AGLTLVASNLFSNVPFVMLARTWVPTLHDVELGWHVLALGSTLAGNLTLVGSVANLIVFEAARGKVNMSFLRFLRVGLPV TLVSFVVGLSVLLVEHALF
Sequences:
>Translated_419_residues MCRAVALAIFLFTYVFIAGARLPYLKLDRPGGALLGAVLMVVFGVVTPAEVFNHSADANRHAIDADTIVLLLGMMLLAAY MSQASFFRTAGAWAVRRAHTPRRLLLAVTFISAALSAFLVNDTVCLMLTPLVLATVEDARLPPAPYLLAVCMGSNSGSVA TFTGNPQNMLIQGASGLSYASFAAYMALPALLSTAVVAAGLLYLFRHDLPVKQFEPNPPPPPVDRGLLVLTLTVLSGVVV AFFAGLPMSWSALAGAALVMALARREPREALERVDWVLLLFFASLFVVVYGVNKHGYAEDIRVLFEPLMAGPPLRETLGF AGLTLVASNLFSNVPFVMLARTWVPTLHDVELGWHVLALGSTLAGNLTLVGSVANLIVFEAARGKVNMSFLRFLRVGLPV TLVSFVVGLSVLLVEHALF >Mature_419_residues MCRAVALAIFLFTYVFIAGARLPYLKLDRPGGALLGAVLMVVFGVVTPAEVFNHSADANRHAIDADTIVLLLGMMLLAAY MSQASFFRTAGAWAVRRAHTPRRLLLAVTFISAALSAFLVNDTVCLMLTPLVLATVEDARLPPAPYLLAVCMGSNSGSVA TFTGNPQNMLIQGASGLSYASFAAYMALPALLSTAVVAAGLLYLFRHDLPVKQFEPNPPPPPVDRGLLVLTLTVLSGVVV AFFAGLPMSWSALAGAALVMALARREPREALERVDWVLLLFFASLFVVVYGVNKHGYAEDIRVLFEPLMAGPPLRETLGF AGLTLVASNLFSNVPFVMLARTWVPTLHDVELGWHVLALGSTLAGNLTLVGSVANLIVFEAARGKVNMSFLRFLRVGLPV TLVSFVVGLSVLLVEHALF
Specific function: Unknown
COG id: COG1055
COG function: function code P; Na+/H+ antiporter NhaD and related arsenite permeases
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CitM (TC 2.A.11) transporter family [H]
Homologues:
Organism=Homo sapiens, GI157266326, Length=218, Percent_Identity=34.8623853211009, Blast_Score=80, Evalue=5e-15, Organism=Escherichia coli, GI1787039, Length=360, Percent_Identity=30.2777777777778, Blast_Score=99, Evalue=3e-22, Organism=Escherichia coli, GI87082277, Length=405, Percent_Identity=25.9259259259259, Blast_Score=68, Evalue=1e-12, Organism=Drosophila melanogaster, GI24581759, Length=221, Percent_Identity=32.579185520362, Blast_Score=80, Evalue=2e-15, Organism=Drosophila melanogaster, GI19920704, Length=221, Percent_Identity=32.579185520362, Blast_Score=80, Evalue=2e-15, Organism=Drosophila melanogaster, GI28574683, Length=221, Percent_Identity=32.579185520362, Blast_Score=80, Evalue=2e-15, Organism=Drosophila melanogaster, GI28574681, Length=221, Percent_Identity=32.579185520362, Blast_Score=80, Evalue=2e-15, Organism=Drosophila melanogaster, GI28574685, Length=221, Percent_Identity=32.579185520362, Blast_Score=80, Evalue=2e-15, Organism=Drosophila melanogaster, GI28574678, Length=221, Percent_Identity=32.579185520362, Blast_Score=80, Evalue=2e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000802 - InterPro: IPR004680 [H]
Pfam domain/function: PF03600 CitMHS [H]
EC number: NA
Molecular weight: Translated: 44835; Mature: 44835
Theoretical pI: Translated: 8.79; Mature: 8.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCRAVALAIFLFTYVFIAGARLPYLKLDRPGGALLGAVLMVVFGVVTPAEVFNHSADANR CHHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHCCHHHHHCCCCCCCC HAIDADTIVLLLGMMLLAAYMSQASFFRTAGAWAVRRAHTPRRLLLAVTFISAALSAFLV CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH NDTVCLMLTPLVLATVEDARLPPAPYLLAVCMGSNSGSVATFTGNPQNMLIQGASGLSYA CCHHHHHHHHHHHHHHHHCCCCCCHHEEEEEECCCCCCEEEEECCCCCEEEECCCCCCHH SFAAYMALPALLSTAVVAAGLLYLFRHDLPVKQFEPNPPPPPVDRGLLVLTLTVLSGVVV HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH AFFAGLPMSWSALAGAALVMALARREPREALERVDWVLLLFFASLFVVVYGVNKHGYAED HHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH IRVLFEPLMAGPPLRETLGFAGLTLVASNLFSNVPFVMLARTWVPTLHDVELGWHVLALG HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCEEHHHCEEHEECC STLAGNLTLVGSVANLIVFEAARGKVNMSFLRFLRVGLPVTLVSFVVGLSVLLVEHALF CHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MCRAVALAIFLFTYVFIAGARLPYLKLDRPGGALLGAVLMVVFGVVTPAEVFNHSADANR CHHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHCCHHHHHCCCCCCCC HAIDADTIVLLLGMMLLAAYMSQASFFRTAGAWAVRRAHTPRRLLLAVTFISAALSAFLV CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH NDTVCLMLTPLVLATVEDARLPPAPYLLAVCMGSNSGSVATFTGNPQNMLIQGASGLSYA CCHHHHHHHHHHHHHHHHCCCCCCHHEEEEEECCCCCCEEEEECCCCCEEEECCCCCCHH SFAAYMALPALLSTAVVAAGLLYLFRHDLPVKQFEPNPPPPPVDRGLLVLTLTVLSGVVV HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH AFFAGLPMSWSALAGAALVMALARREPREALERVDWVLLLFFASLFVVVYGVNKHGYAED HHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH IRVLFEPLMAGPPLRETLGFAGLTLVASNLFSNVPFVMLARTWVPTLHDVELGWHVLALG HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCEEHHHCEEHEECC STLAGNLTLVGSVANLIVFEAARGKVNMSFLRFLRVGLPVTLVSFVVGLSVLLVEHALF CHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11234002 [H]