| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108762290
Identifier: 108762290
GI number: 108762290
Start: 4611191
End: 4612117
Strand: Direct
Name: 108762290
Synonym: MXAN_3836
Alternate gene names: NA
Gene position: 4611191-4612117 (Clockwise)
Preceding gene: 108759911
Following gene: 108758275
Centisome position: 50.45
GC content: 69.26
Gene sequence:
>927_bases ATGCACAGCCCGAAGCCAGCAGCAGTGCGAGAAACGGCAGTATCCGTCGCGTCATGTAGGGACTGTTCTACCCCATTCCC GTCCCTCACGCTCCTCCCCGGCCTCCTGGGTGTTGGCTGGTCTGCGGTCGTGCCTGACTGGCTGCTATGCTTCACAGCCG TGAAACAGCCGCCTGTCACACCCTCTGTCTCGCTCCCTGGCCGCAAGCGCCGGCTTGGGGAGATTCTCATGGACGCCGGG CTCCTCTCGGAAACCCAGCTCCGCTCCGCCCTCGCGGAACAACGCAAATGGGGCGGCAAGCTGGGCCTCACCCTGGTGCA GATGGGGTACGTGGACGAAAGCTCCATGGTCCACGCCCTGTCGCGGCAGCTCGCCATTCCCACGGTGGATCTGGAGCAGC ACGCAGCGTCCGCGGTGGTGCTGCAGGCGCTCCGGGCGGACATCGCCGAGCGCTACACCGTCTTCCCCATCGCCGCGGAT CCGGCCACGAAGACGCTCACCGTCGCCACCGCCGACCCCACCAACGTGGAGGCGTTCCAGGAGTTGGCCTTCCACTGTGG CCAGCGCCTCCAGGTGGTCGTCTCGAGCGCCTCGTCCATCGAGCGCGCCATCCGCCGCCACTACCACGGGGAGGTCACCT CCACGACGGCGACCCCGCTGTCCTTCGGCATGGACGAGCCCACCTTCGAGCTGGCGCCCCCGGCCGAAAGCGCTCCCGTG TCGATGGCCGTGCGCGCGGCCTCGGCGACCCTGGCGCAGCCCGGCCGTGAGACGGAGCTCACCCAGCGCGTGGAGGAGCT GACGCAGCAGGTGGCGGGGCTGGAGCGGATGGTGGCCCAGCAGGCCCGCTCGCTGCGGGCCATGCTGGAGCTCCTGGAGA CGCGCGGCCTGGTGACGCGAGACGACTACCTCGCCAAGGTGCGCTGA
Upstream 100 bases:
>100_bases TCGCGGAACACGTGGCTCTTGGGGCCGGCCCCGTCCTCGATGCGGGAGATGAAGGCCGGACGCCGGACGCGGTCCAGGTC CGCGCCAGCCAGGCGCTGCG
Downstream 100 bases:
>100_bases CGTCAGACGAGGATGAGGTCTTCCTCGACGCCGGCTTCGGTCAGCACGCGCTGCGTGCGCCGGAGCCGTTCGTCGCTCAG GTCGGAGATCAGGGCCAGGA
Product: general secretion pathway protein E
Products: NA
Alternate protein names: General Secretion Pathway Protein E; Type IV-A Pilus Assembly ATPase PilB; MSHA Biogenesis Protein MshE; Type IV Pilus Assembly Protein PilB; General Secretory System II Protein E Domain Protein; General Secretory System II Protein E; General Secretory System II Protein E-Like; GspIIEN Domain-Containing Protein; Pili Biogenesis Protein PilB-Like ATPase; Type IV Fimbrial Assembly Protein PilB; Response Regulator; Type IV Pilus Biogenesis Protein PilB; Type Iv-A Pilus Assembly ATPase Pilb; General Secretory Pathway Protein E; GSPII_E Domain/HD Domain/Response Regulator; Type IV Pilin; Type II Secretory Pathway; General Secretion Protein E; Pilus Assembly Pathway ATPase PilB; Serine/Threonine-Protein Kinase; Tfp Pilus Assembly Protein PilB; ATPase Type IV Pilus Assembly Protein PilB; MshA Biogenesis Protein MshE; Secretion System Protein E; Type II Secretory Pathway ATPase; Type IV Pilus Biogenesis ATPase PilB; GspE N-Terminal Domain-Containing Protein; Type IV Pilus Assembly Protein
Number of amino acids: Translated: 308; Mature: 308
Protein sequence:
>308_residues MHSPKPAAVRETAVSVASCRDCSTPFPSLTLLPGLLGVGWSAVVPDWLLCFTAVKQPPVTPSVSLPGRKRRLGEILMDAG LLSETQLRSALAEQRKWGGKLGLTLVQMGYVDESSMVHALSRQLAIPTVDLEQHAASAVVLQALRADIAERYTVFPIAAD PATKTLTVATADPTNVEAFQELAFHCGQRLQVVVSSASSIERAIRRHYHGEVTSTTATPLSFGMDEPTFELAPPAESAPV SMAVRAASATLAQPGRETELTQRVEELTQQVAGLERMVAQQARSLRAMLELLETRGLVTRDDYLAKVR
Sequences:
>Translated_308_residues MHSPKPAAVRETAVSVASCRDCSTPFPSLTLLPGLLGVGWSAVVPDWLLCFTAVKQPPVTPSVSLPGRKRRLGEILMDAG LLSETQLRSALAEQRKWGGKLGLTLVQMGYVDESSMVHALSRQLAIPTVDLEQHAASAVVLQALRADIAERYTVFPIAAD PATKTLTVATADPTNVEAFQELAFHCGQRLQVVVSSASSIERAIRRHYHGEVTSTTATPLSFGMDEPTFELAPPAESAPV SMAVRAASATLAQPGRETELTQRVEELTQQVAGLERMVAQQARSLRAMLELLETRGLVTRDDYLAKVR >Mature_308_residues MHSPKPAAVRETAVSVASCRDCSTPFPSLTLLPGLLGVGWSAVVPDWLLCFTAVKQPPVTPSVSLPGRKRRLGEILMDAG LLSETQLRSALAEQRKWGGKLGLTLVQMGYVDESSMVHALSRQLAIPTVDLEQHAASAVVLQALRADIAERYTVFPIAAD PATKTLTVATADPTNVEAFQELAFHCGQRLQVVVSSASSIERAIRRHYHGEVTSTTATPLSFGMDEPTFELAPPAESAPV SMAVRAASATLAQPGRETELTQRVEELTQQVAGLERMVAQQARSLRAMLELLETRGLVTRDDYLAKVR
Specific function: Unknown
COG id: COG2804
COG function: function code NU; Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33233; Mature: 33233
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHSPKPAAVRETAVSVASCRDCSTPFPSLTLLPGLLGVGWSAVVPDWLLCFTAVKQPPVT CCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCC PSVSLPGRKRRLGEILMDAGLLSETQLRSALAEQRKWGGKLGLTLVQMGYVDESSMVHAL CCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHCHHHHHCCCCCHHHHHHHH SRQLAIPTVDLEQHAASAVVLQALRADIAERYTVFPIAADPATKTLTVATADPTNVEAFQ HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCEEEEEEECCCCCCEEEEEECCCCCHHHHH ELAFHCGQRLQVVVSSASSIERAIRRHYHGEVTSTTATPLSFGMDEPTFELAPPAESAPV HHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHCCCCCCCEEECCCCCCCCH SMAVRAASATLAQPGRETELTQRVEELTQQVAGLERMVAQQARSLRAMLELLETRGLVTR HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC DDYLAKVR CCHHHCCC >Mature Secondary Structure MHSPKPAAVRETAVSVASCRDCSTPFPSLTLLPGLLGVGWSAVVPDWLLCFTAVKQPPVT CCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCC PSVSLPGRKRRLGEILMDAGLLSETQLRSALAEQRKWGGKLGLTLVQMGYVDESSMVHAL CCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHCHHHHHCCCCCHHHHHHHH SRQLAIPTVDLEQHAASAVVLQALRADIAERYTVFPIAADPATKTLTVATADPTNVEAFQ HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCEEEEEEECCCCCCEEEEEECCCCCHHHHH ELAFHCGQRLQVVVSSASSIERAIRRHYHGEVTSTTATPLSFGMDEPTFELAPPAESAPV HHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHCCCCCCCEEECCCCCCCCH SMAVRAASATLAQPGRETELTQRVEELTQQVAGLERMVAQQARSLRAMLELLETRGLVTR HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC DDYLAKVR CCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA