| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108759873
Identifier: 108759873
GI number: 108759873
Start: 6512697
End: 6514691
Strand: Direct
Name: 108759873
Synonym: MXAN_5217
Alternate gene names: NA
Gene position: 6512697-6514691 (Clockwise)
Preceding gene: 108758526
Following gene: 108761973
Centisome position: 71.26
GC content: 67.32
Gene sequence:
>1995_bases ATGGATGAGATGGAGGGGACCGTCCAACCCGTCGCGGGCGTGTCCACTGGCGTGCCCCGTCCGGCCGCCGCGCGGCGAAT CAAACCGGTCGCGAAGTCCACGCTCCGGCCCTTCCGCCGCACCGTCGCCTCGCGGGCCCTTTCTGGAGTCTTCTCCGGGC TCAACCGCGTCATTGCCTGGCACCGGCTGCCGAAGTTCCTGGGCCTGCTCAACCTGATACCCATCCGCGACGAGCTGCGG GCAAAGAACCTCTACGACACCACACACCTGCCCTCCACCCAGGCTCCCGAGCCCCCCACGTGGGATCCGGAACTGGCCAC CCGGCGCGCCTCGGACGGAACGTACAACGACCTCTCGAATCCCCGGATGGGCGCCGCGGGAACGAGGTTCGGCCGTAACG TCCCGCTTGAGAACGCCTGGCCCGAGCCCGAGCCGGCGCTGCTGGAGCCGAGCCCCCGCGTCATCAGCAACCGGCTGCTC GCGCGCCAGTCGTTCGTTCCGGCCACCTCGCTCAATCTGCTGGCCGCAGCGTGGATTCAATTCATGACCCACGACTGGTT CGACCATGGCTCGCCCAAGCGTGGCGGCGAGTTCAAGGTCCCCCTGGACAAGGAGCGCGGCGACTCCTGGTCCGAGGACC CCATGCGAATCCGCCGCACGCCCGAGGACCCCACCCGCATCCCCGGTGCCAAGGACGGCCCGCCCACGTACATCAACCAG CACTCACAATGGTGGGATGCCTCACAGATTTATGGAAGCAACGAGGAGGAGACGCGCGCCCTGCGCTGCACGGACGATGA GGACGGCGGCCAGCGTCGAGGCAAGCTCATCCTCACCGGCGAAGGGCTGGAGGCGCAGCTCCCGGTAGACCCCAATACCC ACCTGCAGAAGTCCGGGGTGACGCACAACTGGTGGATTGGCCTGAGCCTGCTGCATACGACGTTCGCCAAGGAGCACAAC GCCATCGTGGACCGGCTGCGGCTGGAGTTTCCCGACTGGAATGGCGACCGGCTCTTCCACACGGCCCGCCTCATCAACAC GGCGTTGATGGCGAAAATCCACACCATTGAGTGGACGCCGGCGATCCTCGCGCATCCCACGACTGAGACCGCCCTCAACA CCAACTGGTGGGGCCTGGTCGGCCAACGGGTGACCCGGCTGTTCGGGAGGATGAGCCGCAGCGAGCTCATCAGCGGCATC CCCGGGAGCGAGGTGAACCACCACGGCGTCCCCTTCGCGCTGACCGAGGAGTTCGTGGCCGTCTACCGCATGCACTCGCT GATACCCGACACGATGCGACTGCACCGGATGCGGGATGGCGTCCAGGTGCGCGAGGTGGCGATGGTGGACCTCGCCGGCC CCAACACGCTGAAAGCCCTCGAAGACGGGCTCACCATGGTGGACCTCTGCTACTCCTTCGGTATCAGCCACCCCGGCGCG CTCGTGCTGCACAACTACCCCGCCTTCCTGCGCGACCTCCACCGGCAGGATCCGGACGGCGCCGAGTCCCGCGTGGACCT GGCATCCATCGACGTGATGCGCGACCGGGAGCGCGGCGTGCCTCGCTACAACGCCTTCCGCAAGCTGATGCACCTCCAGC CGGCCCGCTCCTTCAAGGACATCACCCGTAACGAGCAGTGGGCCCGGGAGCTGCGTGAGGTCTATGGCCACGTGGACCGC GTGGACCTGATGGTGGGCATGCTCGCCGAAGACCCGCCCAGGGGTTTTGGCTTCAGCGACACGGCCTTCCGCGTCTTCAT CCTCATGGCCTCGCGCCGGCTGGCGAGCGACCGCTTCTTCACCAACGACCAGAACGTCAACCTCTACACTCAGCCCGGGA TGGCGTGGCTCAACGAGAACACCATGGCCAGCGTGCTGCTGCGCCACTACCCGGGACTCGCCCCCGCGCTCCGCCAGACA CGGAATGCATTCGCCCCCTGGGAGCCGGTGAGCATGGTGGCCACGGAGCCCCCGGCGGGAAGCCTCCTTCACTGA
Upstream 100 bases:
>100_bases ATCCACCGCTGCCATTCCCATGATGGCGGGGCCACGGCCCCCGGCCGAAGCGGTTCGTCTGACAGGGGCTGTGACGGTCA TGGGAGGGGTGATGAGTGGA
Downstream 100 bases:
>100_bases GCCGGGGTCACCACTCGTTCCAGGGGGCGGGGGCCGGACCACTCCGGCCCCCGCGGGCAGGAGACTTCCATGCCATTCGG CACGATATTTCGAGAGCTGA
Product: peroxidase family protein
Products: NA
Alternate protein names: Peroxidase Family Protein; Heme Peroxidase; Haem Peroxidase; Oxygenase; Animal Haem Peroxidase Family; Peroxinectin; Animal Haem Peroxidase; Animal Haem Peroxidase Superfamily
Number of amino acids: Translated: 664; Mature: 664
Protein sequence:
>664_residues MDEMEGTVQPVAGVSTGVPRPAAARRIKPVAKSTLRPFRRTVASRALSGVFSGLNRVIAWHRLPKFLGLLNLIPIRDELR AKNLYDTTHLPSTQAPEPPTWDPELATRRASDGTYNDLSNPRMGAAGTRFGRNVPLENAWPEPEPALLEPSPRVISNRLL ARQSFVPATSLNLLAAAWIQFMTHDWFDHGSPKRGGEFKVPLDKERGDSWSEDPMRIRRTPEDPTRIPGAKDGPPTYINQ HSQWWDASQIYGSNEEETRALRCTDDEDGGQRRGKLILTGEGLEAQLPVDPNTHLQKSGVTHNWWIGLSLLHTTFAKEHN AIVDRLRLEFPDWNGDRLFHTARLINTALMAKIHTIEWTPAILAHPTTETALNTNWWGLVGQRVTRLFGRMSRSELISGI PGSEVNHHGVPFALTEEFVAVYRMHSLIPDTMRLHRMRDGVQVREVAMVDLAGPNTLKALEDGLTMVDLCYSFGISHPGA LVLHNYPAFLRDLHRQDPDGAESRVDLASIDVMRDRERGVPRYNAFRKLMHLQPARSFKDITRNEQWARELREVYGHVDR VDLMVGMLAEDPPRGFGFSDTAFRVFILMASRRLASDRFFTNDQNVNLYTQPGMAWLNENTMASVLLRHYPGLAPALRQT RNAFAPWEPVSMVATEPPAGSLLH
Sequences:
>Translated_664_residues MDEMEGTVQPVAGVSTGVPRPAAARRIKPVAKSTLRPFRRTVASRALSGVFSGLNRVIAWHRLPKFLGLLNLIPIRDELR AKNLYDTTHLPSTQAPEPPTWDPELATRRASDGTYNDLSNPRMGAAGTRFGRNVPLENAWPEPEPALLEPSPRVISNRLL ARQSFVPATSLNLLAAAWIQFMTHDWFDHGSPKRGGEFKVPLDKERGDSWSEDPMRIRRTPEDPTRIPGAKDGPPTYINQ HSQWWDASQIYGSNEEETRALRCTDDEDGGQRRGKLILTGEGLEAQLPVDPNTHLQKSGVTHNWWIGLSLLHTTFAKEHN AIVDRLRLEFPDWNGDRLFHTARLINTALMAKIHTIEWTPAILAHPTTETALNTNWWGLVGQRVTRLFGRMSRSELISGI PGSEVNHHGVPFALTEEFVAVYRMHSLIPDTMRLHRMRDGVQVREVAMVDLAGPNTLKALEDGLTMVDLCYSFGISHPGA LVLHNYPAFLRDLHRQDPDGAESRVDLASIDVMRDRERGVPRYNAFRKLMHLQPARSFKDITRNEQWARELREVYGHVDR VDLMVGMLAEDPPRGFGFSDTAFRVFILMASRRLASDRFFTNDQNVNLYTQPGMAWLNENTMASVLLRHYPGLAPALRQT RNAFAPWEPVSMVATEPPAGSLLH >Mature_664_residues MDEMEGTVQPVAGVSTGVPRPAAARRIKPVAKSTLRPFRRTVASRALSGVFSGLNRVIAWHRLPKFLGLLNLIPIRDELR AKNLYDTTHLPSTQAPEPPTWDPELATRRASDGTYNDLSNPRMGAAGTRFGRNVPLENAWPEPEPALLEPSPRVISNRLL ARQSFVPATSLNLLAAAWIQFMTHDWFDHGSPKRGGEFKVPLDKERGDSWSEDPMRIRRTPEDPTRIPGAKDGPPTYINQ HSQWWDASQIYGSNEEETRALRCTDDEDGGQRRGKLILTGEGLEAQLPVDPNTHLQKSGVTHNWWIGLSLLHTTFAKEHN AIVDRLRLEFPDWNGDRLFHTARLINTALMAKIHTIEWTPAILAHPTTETALNTNWWGLVGQRVTRLFGRMSRSELISGI PGSEVNHHGVPFALTEEFVAVYRMHSLIPDTMRLHRMRDGVQVREVAMVDLAGPNTLKALEDGLTMVDLCYSFGISHPGA LVLHNYPAFLRDLHRQDPDGAESRVDLASIDVMRDRERGVPRYNAFRKLMHLQPARSFKDITRNEQWARELREVYGHVDR VDLMVGMLAEDPPRGFGFSDTAFRVFILMASRRLASDRFFTNDQNVNLYTQPGMAWLNENTMASVLLRHYPGLAPALRQT RNAFAPWEPVSMVATEPPAGSLLH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Caenorhabditis elegans, GI17534209, Length=549, Percent_Identity=24.5901639344262, Blast_Score=107, Evalue=2e-23, Organism=Caenorhabditis elegans, GI17536077, Length=561, Percent_Identity=26.7379679144385, Blast_Score=98, Evalue=1e-20, Organism=Drosophila melanogaster, GI24647689, Length=545, Percent_Identity=23.6697247706422, Blast_Score=80, Evalue=4e-15, Organism=Drosophila melanogaster, GI24647576, Length=287, Percent_Identity=25.4355400696864, Blast_Score=70, Evalue=4e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 74860; Mature: 74860
Theoretical pI: Translated: 8.31; Mature: 8.31
Prosite motif: PS50292 PEROXIDASE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDEMEGTVQPVAGVSTGVPRPAAARRIKPVAKSTLRPFRRTVASRALSGVFSGLNRVIAW CCCCCCCCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HRLPKFLGLLNLIPIRDELRAKNLYDTTHLPSTQAPEPPTWDPELATRRASDGTYNDLSN HHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCC PRMGAAGTRFGRNVPLENAWPEPEPALLEPSPRVISNRLLARQSFVPATSLNLLAAAWIQ CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHH FMTHDWFDHGSPKRGGEFKVPLDKERGDSWSEDPMRIRRTPEDPTRIPGAKDGPPTYINQ HHHHHHHCCCCCCCCCEECCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCC HSQWWDASQIYGSNEEETRALRCTDDEDGGQRRGKLILTGEGLEAQLPVDPNTHLQKSGV CCCCCCHHHHCCCCHHHCCEEECCCCCCCCCCCCEEEEECCCCEEECCCCCCCCHHHCCC THNWWIGLSLLHTTFAKEHNAIVDRLRLEFPDWNGDRLFHTARLINTALMAKIHTIEWTP CEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHEEECCC AILAHPTTETALNTNWWGLVGQRVTRLFGRMSRSELISGIPGSEVNHHGVPFALTEEFVA HHEECCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHH VYRMHSLIPDTMRLHRMRDGVQVREVAMVDLAGPNTLKALEDGLTMVDLCYSFGISHPGA HHHHHHHCHHHHHHHHHHCCCCEEHEEEEECCCCCHHHHHHHCCHHHHHHHHHCCCCCCE LVLHNYPAFLRDLHRQDPDGAESRVDLASIDVMRDRERGVPRYNAFRKLMHLQPARSFKD EEEECCHHHHHHHHCCCCCCCHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCHHHHHHH ITRNEQWARELREVYGHVDRVDLMVGMLAEDPPRGFGFSDTAFRVFILMASRRLASDRFF HHCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCC TNDQNVNLYTQPGMAWLNENTMASVLLRHYPGLAPALRQTRNAFAPWEPVSMVATEPPAG CCCCCEEEEECCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCEEEECCCCCC SLLH CCCC >Mature Secondary Structure MDEMEGTVQPVAGVSTGVPRPAAARRIKPVAKSTLRPFRRTVASRALSGVFSGLNRVIAW CCCCCCCCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HRLPKFLGLLNLIPIRDELRAKNLYDTTHLPSTQAPEPPTWDPELATRRASDGTYNDLSN HHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCC PRMGAAGTRFGRNVPLENAWPEPEPALLEPSPRVISNRLLARQSFVPATSLNLLAAAWIQ CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHH FMTHDWFDHGSPKRGGEFKVPLDKERGDSWSEDPMRIRRTPEDPTRIPGAKDGPPTYINQ HHHHHHHCCCCCCCCCEECCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCC HSQWWDASQIYGSNEEETRALRCTDDEDGGQRRGKLILTGEGLEAQLPVDPNTHLQKSGV CCCCCCHHHHCCCCHHHCCEEECCCCCCCCCCCCEEEEECCCCEEECCCCCCCCHHHCCC THNWWIGLSLLHTTFAKEHNAIVDRLRLEFPDWNGDRLFHTARLINTALMAKIHTIEWTP CEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHEEECCC AILAHPTTETALNTNWWGLVGQRVTRLFGRMSRSELISGIPGSEVNHHGVPFALTEEFVA HHEECCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHH VYRMHSLIPDTMRLHRMRDGVQVREVAMVDLAGPNTLKALEDGLTMVDLCYSFGISHPGA HHHHHHHCHHHHHHHHHHCCCCEEHEEEEECCCCCHHHHHHHCCHHHHHHHHHCCCCCCE LVLHNYPAFLRDLHRQDPDGAESRVDLASIDVMRDRERGVPRYNAFRKLMHLQPARSFKD EEEECCHHHHHHHHCCCCCCCHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCHHHHHHH ITRNEQWARELREVYGHVDRVDLMVGMLAEDPPRGFGFSDTAFRVFILMASRRLASDRFF HHCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCC TNDQNVNLYTQPGMAWLNENTMASVLLRHYPGLAPALRQTRNAFAPWEPVSMVATEPPAG CCCCCEEEEECCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCEEEECCCCCC SLLH CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA