| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108758526
Identifier: 108758526
GI number: 108758526
Start: 6511094
End: 6512530
Strand: Direct
Name: 108758526
Synonym: MXAN_5216
Alternate gene names: NA
Gene position: 6511094-6512530 (Clockwise)
Preceding gene: 108758614
Following gene: 108759873
Centisome position: 71.24
GC content: 67.71
Gene sequence:
>1437_bases ATGAGTTCCTCCAGGCATCACACAACTTCCCTGACACACGGGGTCCCCTCCCCTGGCGGGCGGCTGGCCCGAGGCCGCCT GCCCCCTCACGTCCTTCCTGCCCCGGCGCGCGGTGGCGTCTCCACCCAGGCAGCCTTAATTCAAGTCAGGGGAGGCGCAT CCATGACCAGCCATCTCGTGCTCGTGCCCGGCTTCGGTGGATTTGATGCACTGGGCTCGCTCCGCTACTACCACGGCGTG ACGGAAGTGCTTCAGGCTGGTGACGACGAGCGGCCCGTCCACTACTTCACCAACCTGCCCACGGCGAGCGTCCAGACGCG GGCCCAGGCGCTCCAGTCGTGGCTGTCCGAACTGCGGAATCGAAGGGCGATAGCGCCGGAAGATGAAATCCATCTGGTCG GCCATTCGACGGGTGGCCTGGACCTCCGCCAGTTGCTCATCAACCTCCGGAACCAGCAGGCGCAGAAATGTGCGGACAGC CCGCTCCCGCTGCTCAAGCAGCTCCGTACCGTGCAGTTCATCTCGACGCCCCACCAGGGAACCGCGCTCGCGCACCGGCT GGGCAACTCCCGCCCACAGGTGCTCGCGTCCCGCCTGTTCCTGCGCGTGCTGTACGAGGGTACGCGCGGACTGAGAGGCG TGGGGCTGGGGGTCCTCGGGCGCGCACTCATGACCTTGAGTCCCAGGCAGCAGACGGCCGACTGGATCGACGCCATCATC GACACCCTGGTGCGTTGCTACTCCCGGGAGGCGAGCCTCCCGCGTGCTACCGCGCGCGGCACCTACTTCGACCTGCTGCG CTGGCTGCTTCACATGACCAGCGACTTCGCCGTCATCACCGACCTGGACCCAGCTCCCGCCTCCCCGGCGCCCCCGAGTC CGGCCCATGCCGGGGATGCAGAACTCGCTGCGGAGGCGGCCTTCATCGAGGAGCACCACATCCAGGTCCGCTCCATCGTA ACGGTCGCGCCCCCCAGCAAGGCCTGGCCACCCACCTTGTTCAAGGTGCTGCACGCGCTGACTGCCTTCAATCCTCCGCA ACGGCTGCGGCGCACGCGCGAACTCCACGAACTCTGGACCAGCAAGCACCAGGTGCTGCGTCCCACCGACAACGATGGCA TCGTCAACTCCGTCTCCCAGGTCTGGCCGGACGAGGCCCGCAGCTACCTGCTCCAGGGCGATCATGCGGACGTCATCGGG CACTTCAGCGCGCAATGCCCACCGTCCCAGGCCAGTGTCGCGGCCACCACGTTCCGCCAGTACGACCTGCTGAACTCCCC CGCGGGCTTCGATCAACGGCGGTTCATCAGGCTCTGGAAGGACATCGGCCGCTTCACGGCCAGCCAGCAACACCGGGAAG CAACGGCGCCTCGGCCGCGCGGTGGAGCGCGCATCCACCACATCGGGAGCGCGCCGCCGCACCGAGCGGACTCGTGA
Upstream 100 bases:
>100_bases TTTGTCAGTGGGCTTCACCGCAGGGGTCTCCCCTGTCGGCGCCACCCCAGCTATGCGGCCTTGACCTGTTACCGCCTCGG GACTTTCACCCTACGGGTCC
Downstream 100 bases:
>100_bases ACCCGGCCGCGGAGCCCCCACACAGCGTCGTCTGGAGCACCGCCCCCCACACACCCGGACGATTCAATCCACCGCTGCCA TTCCCATGATGGCGGGGCCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 478; Mature: 477
Protein sequence:
>478_residues MSSSRHHTTSLTHGVPSPGGRLARGRLPPHVLPAPARGGVSTQAALIQVRGGASMTSHLVLVPGFGGFDALGSLRYYHGV TEVLQAGDDERPVHYFTNLPTASVQTRAQALQSWLSELRNRRAIAPEDEIHLVGHSTGGLDLRQLLINLRNQQAQKCADS PLPLLKQLRTVQFISTPHQGTALAHRLGNSRPQVLASRLFLRVLYEGTRGLRGVGLGVLGRALMTLSPRQQTADWIDAII DTLVRCYSREASLPRATARGTYFDLLRWLLHMTSDFAVITDLDPAPASPAPPSPAHAGDAELAAEAAFIEEHHIQVRSIV TVAPPSKAWPPTLFKVLHALTAFNPPQRLRRTRELHELWTSKHQVLRPTDNDGIVNSVSQVWPDEARSYLLQGDHADVIG HFSAQCPPSQASVAATTFRQYDLLNSPAGFDQRRFIRLWKDIGRFTASQQHREATAPRPRGGARIHHIGSAPPHRADS
Sequences:
>Translated_478_residues MSSSRHHTTSLTHGVPSPGGRLARGRLPPHVLPAPARGGVSTQAALIQVRGGASMTSHLVLVPGFGGFDALGSLRYYHGV TEVLQAGDDERPVHYFTNLPTASVQTRAQALQSWLSELRNRRAIAPEDEIHLVGHSTGGLDLRQLLINLRNQQAQKCADS PLPLLKQLRTVQFISTPHQGTALAHRLGNSRPQVLASRLFLRVLYEGTRGLRGVGLGVLGRALMTLSPRQQTADWIDAII DTLVRCYSREASLPRATARGTYFDLLRWLLHMTSDFAVITDLDPAPASPAPPSPAHAGDAELAAEAAFIEEHHIQVRSIV TVAPPSKAWPPTLFKVLHALTAFNPPQRLRRTRELHELWTSKHQVLRPTDNDGIVNSVSQVWPDEARSYLLQGDHADVIG HFSAQCPPSQASVAATTFRQYDLLNSPAGFDQRRFIRLWKDIGRFTASQQHREATAPRPRGGARIHHIGSAPPHRADS >Mature_477_residues SSSRHHTTSLTHGVPSPGGRLARGRLPPHVLPAPARGGVSTQAALIQVRGGASMTSHLVLVPGFGGFDALGSLRYYHGVT EVLQAGDDERPVHYFTNLPTASVQTRAQALQSWLSELRNRRAIAPEDEIHLVGHSTGGLDLRQLLINLRNQQAQKCADSP LPLLKQLRTVQFISTPHQGTALAHRLGNSRPQVLASRLFLRVLYEGTRGLRGVGLGVLGRALMTLSPRQQTADWIDAIID TLVRCYSREASLPRATARGTYFDLLRWLLHMTSDFAVITDLDPAPASPAPPSPAHAGDAELAAEAAFIEEHHIQVRSIVT VAPPSKAWPPTLFKVLHALTAFNPPQRLRRTRELHELWTSKHQVLRPTDNDGIVNSVSQVWPDEARSYLLQGDHADVIGH FSAQCPPSQASVAATTFRQYDLLNSPAGFDQRRFIRLWKDIGRFTASQQHREATAPRPRGGARIHHIGSAPPHRADS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52420; Mature: 52289
Theoretical pI: Translated: 10.61; Mature: 10.61
Prosite motif: PS00120 LIPASE_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSSRHHTTSLTHGVPSPGGRLARGRLPPHVLPAPARGGVSTQAALIQVRGGASMTSHLV CCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEE LVPGFGGFDALGSLRYYHGVTEVLQAGDDERPVHYFTNLPTASVQTRAQALQSWLSELRN EECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHH RRAIAPEDEIHLVGHSTGGLDLRQLLINLRNQQAQKCADSPLPLLKQLRTVQFISTPHQG CCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCH TALAHRLGNSRPQVLASRLFLRVLYEGTRGLRGVGLGVLGRALMTLSPRQQTADWIDAII HHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHH DTLVRCYSREASLPRATARGTYFDLLRWLLHMTSDFAVITDLDPAPASPAPPSPAHAGDA HHHHHHHHHHCCCCCHHHCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCH ELAAEAAFIEEHHIQVRSIVTVAPPSKAWPPTLFKVLHALTAFNPPQRLRRTRELHELWT HHHHHHHHHHHHHEEEEEEEEECCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH SKHQVLRPTDNDGIVNSVSQVWPDEARSYLLQGDHADVIGHFSAQCPPSQASVAATTFRQ CCCCEECCCCCCHHHHHHHHHCCHHHHHHHHCCCCHHHHHCCCCCCCCCCHHHHHHHHHH YDLLNSPAGFDQRRFIRLWKDIGRFTASQQHREATAPRPRGGARIHHIGSAPPHRADS HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCC >Mature Secondary Structure SSSRHHTTSLTHGVPSPGGRLARGRLPPHVLPAPARGGVSTQAALIQVRGGASMTSHLV CCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEE LVPGFGGFDALGSLRYYHGVTEVLQAGDDERPVHYFTNLPTASVQTRAQALQSWLSELRN EECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHH RRAIAPEDEIHLVGHSTGGLDLRQLLINLRNQQAQKCADSPLPLLKQLRTVQFISTPHQG CCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCH TALAHRLGNSRPQVLASRLFLRVLYEGTRGLRGVGLGVLGRALMTLSPRQQTADWIDAII HHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHH DTLVRCYSREASLPRATARGTYFDLLRWLLHMTSDFAVITDLDPAPASPAPPSPAHAGDA HHHHHHHHHHCCCCCHHHCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCH ELAAEAAFIEEHHIQVRSIVTVAPPSKAWPPTLFKVLHALTAFNPPQRLRRTRELHELWT HHHHHHHHHHHHHEEEEEEEEECCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH SKHQVLRPTDNDGIVNSVSQVWPDEARSYLLQGDHADVIGHFSAQCPPSQASVAATTFRQ CCCCEECCCCCCHHHHHHHHHCCHHHHHHHHCCCCHHHHHCCCCCCCCCCHHHHHHHHHH YDLLNSPAGFDQRRFIRLWKDIGRFTASQQHREATAPRPRGGARIHHIGSAPPHRADS HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA