| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is leuS [H]
Identifier: 108759560
GI number: 108759560
Start: 4963930
End: 4966416
Strand: Reverse
Name: leuS [H]
Synonym: MXAN_4051
Alternate gene names: 108759560
Gene position: 4966416-4963930 (Counterclockwise)
Preceding gene: 108758926
Following gene: 108762189
Centisome position: 54.34
GC content: 66.51
Gene sequence:
>2487_bases ATGTCCACAGAACGGCCGAAGTACGACCCGGCGAACATCGAACCCCTCTGGCAGGCCCGTTGGGAAGAGCAGCGCATCTT CGAGGCGCGCAGACACCCCGGCAAACCGAAGGCGTACATCCTCGACATGTTCCCTTACCCCTCGGGAGCCGGGCTGCACG TCGGGCACCCGGAGGGCTACACGGCCACGGACATCGTCTCGCGGTACTTGCGGATGCGGGGATATGATGTCCTTCATCCC ATGGGATGGGACGCGTTCGGCCTGCCCGCGGAGCAGCACGCGCTCGAAACGGGAACCCACCCGGCGGATACCACCGCGAA GAACGTCGCGACGTTCAAGCGGCAGCTCAAGTCTCTTGGGTTCTCGTACGACTGGTCTCGCGAGCTCTCCACGACCGACC CGGAGTACGTGCGTTGGACCCAGTGGCTCTTCCTCAAGCTCTTCGATCGCGGGCTGGCCTATCAGGCCGAGCTCCCGGTG AACTGGTGCGCGGCGCTCGGCACGGTGCTCGCCAACGAGGAGGTCATTGACGGGAAAAGCGAGCGGGGCAGTCACCCGGT CGTGCGGCTGCCGCTGCGGCAGTGGACGCTTCGCATCACGGCGTACGCCGATCGGCTCGCCGAGGACCTTTCGGGGCTGG ATTGGCCCGAGACGCGGGAGAAGCAGCTCCACTGGATTGGGCGCAGTGAGGGCGCTGAGGTCGATTTCGCCATCGAGGGC AGCGCGGACCGCCTCCGCATCTTCACCACCCGTCCGGACACGCTCTTCGGCGCGACGTACATGGTCGTCGCACCCGAGCA CCCGCTGCTGGAGCGGTTCGCCACGGCGGAGCGGCGCGCCGAGGTTCTGGCCTACCGAGAAGCGACCGCAAGCCGAAGCG AGTTGGACCGCACCGCGCTCACGAAAGCCAAGACCGGCGTGTTCACCGGCTCCTATGCGCTGCACCCGCTCACGGGAGCG CGCCTCCCCATCTGGGTCGCGGACTTCGTGCTCGGCTCTTATGGGACGGGCGCCATCATGAGCGTGCCCGGCCATGACGC GCGTGATTTCGAGTTCGCGCGTGCCTTCGGCTTGCCCGTCGTCGAGGTGGTTTCGGTCGACGGCGCCCTGAACGAGACTG GCACGTGGACGGAGGCATTCGTGGGGGACGGCGTCGCGGTGCGCTCGCGCTTCCTCGATGGGCTGCGGACGCCCGAGGCC AAGGCGGCCATGCTCGCCCACCTCGAGCGCGAGGGATTGGGCGCACGGCGCGTCCAGTACCGCTTGCGGGATTGGGTGTT CTCGCGCCAGCGCTATTGGGGGGAGCCGATCCCCATCTATTTCCCGGTCGAGCTCGCGGAGGGCTCATCGGACCCGCGTA TTCATCCCCACACCATTCGCTACGACCAGCCTCTGCCCGTGTCCGAGGACGAGCTGCCGGTGCGGCTCCCCGAGCTCGAG GACTTCAAGCCCAGCGAGGACCCGGCGGGCCCGCTGGCCCGCGCCTTGGATTGGCGATTCTTCCAGCGCGACGGAAAGTG GTACGCGCGAGAGACCAACACCATGCCTCAATGGGCGGGCTCGTGCTGGTACTACCTGCGCTTCATTGACCCGAAGAACA CCCAGGCCATCTTCTCGCAGCAGGCGTACGACGCCTGGATGCCGGTGGACCTGTATGTCGGCGGTTCGGAGCACGCGGTG CTGCACCTGCTCTACGCCCGGTTCTGGCACAAGGTGCTGTTCGATTGCGGCCTCGTCACGCACGCCGAGCCGTTCAAGAA GCTCGTCCACCAGGGAATGATCCTCGGTGAGAACAACGAGAAGATGTCCAAGTCGCGTGGCAACGTGGTGAACCCGGACG ACATTGTCCGGCAGTTCGGTGCGGACGCCCTGCGCATGTACGAGATGTTCATGGGGCCGCTGGAGGCGGTGAAGCCGTGG CAGACCAACGGCGTCATCGGCGTGCGGCGTTTCCTTGACCGCGTGTGGAACATGCTCGCGTTCGTGACGGAGGACGCGGG TGGTGCACCGGCGGAGCTGACCGAGGACGCGCGGCGGCTGCTGCACAAGACGGTGAAGAAGGTGGGGGAGGACATCGAAG CGCTGCGCTTCAACACGGCCGTGAGCGCGATGATGATTCTCGCCAACGCGCTGGCCGAGCTCCCGCGCGTGCCGCTCGAG GCGGCCAGGGTCTTTGCGCGGATTCTCTCCCCATTCGCGCCTCACCTCTCGGAGGAACTCTGGCACCGCTGGGGCGCAAG CGAGTCCATTTCCCTCCAGCCGTGGCCTGAATACGACCCCGCGTTGACCGTGGACGAGCTCGTCGAAATGGCCATCCAGG TCAACGGCAAGGTCCGAGGGAAGCTGCGCCTGAAGCGAGACGCCACGGAGGCGGAGGCGCGCGAGGCCGTCCACCGAGAG CCGGAGCTCATCCCGCATCTCGCTGGAAAGACCGAGCGCCGATTCGTCTACGTGCCAGGGCGAATCATCAACATCGTCGT TGGCTGA
Upstream 100 bases:
>100_bases GGATGGCGGGCTTGAGAACGATCATCATCGCGGAGCAGACCACCCGAAGAGCCGCTCTGCCGCCTGCTGACTGGGCATGC CCGTTGTGGTAACTGGCGCC
Downstream 100 bases:
>100_bases GGCGCTGCGGCGAACGCAGTCACTTGCGCGGGAAGTGCGGATACACGTCCTCCTGGAGCACCTGACGCAGCTTCGGGAAG TTCAACGCCCACTTCACGCC
Product: leucyl-tRNA synthetase
Products: NA
Alternate protein names: Leucine--tRNA ligase; LeuRS [H]
Number of amino acids: Translated: 828; Mature: 827
Protein sequence:
>828_residues MSTERPKYDPANIEPLWQARWEEQRIFEARRHPGKPKAYILDMFPYPSGAGLHVGHPEGYTATDIVSRYLRMRGYDVLHP MGWDAFGLPAEQHALETGTHPADTTAKNVATFKRQLKSLGFSYDWSRELSTTDPEYVRWTQWLFLKLFDRGLAYQAELPV NWCAALGTVLANEEVIDGKSERGSHPVVRLPLRQWTLRITAYADRLAEDLSGLDWPETREKQLHWIGRSEGAEVDFAIEG SADRLRIFTTRPDTLFGATYMVVAPEHPLLERFATAERRAEVLAYREATASRSELDRTALTKAKTGVFTGSYALHPLTGA RLPIWVADFVLGSYGTGAIMSVPGHDARDFEFARAFGLPVVEVVSVDGALNETGTWTEAFVGDGVAVRSRFLDGLRTPEA KAAMLAHLEREGLGARRVQYRLRDWVFSRQRYWGEPIPIYFPVELAEGSSDPRIHPHTIRYDQPLPVSEDELPVRLPELE DFKPSEDPAGPLARALDWRFFQRDGKWYARETNTMPQWAGSCWYYLRFIDPKNTQAIFSQQAYDAWMPVDLYVGGSEHAV LHLLYARFWHKVLFDCGLVTHAEPFKKLVHQGMILGENNEKMSKSRGNVVNPDDIVRQFGADALRMYEMFMGPLEAVKPW QTNGVIGVRRFLDRVWNMLAFVTEDAGGAPAELTEDARRLLHKTVKKVGEDIEALRFNTAVSAMMILANALAELPRVPLE AARVFARILSPFAPHLSEELWHRWGASESISLQPWPEYDPALTVDELVEMAIQVNGKVRGKLRLKRDATEAEAREAVHRE PELIPHLAGKTERRFVYVPGRIINIVVG
Sequences:
>Translated_828_residues MSTERPKYDPANIEPLWQARWEEQRIFEARRHPGKPKAYILDMFPYPSGAGLHVGHPEGYTATDIVSRYLRMRGYDVLHP MGWDAFGLPAEQHALETGTHPADTTAKNVATFKRQLKSLGFSYDWSRELSTTDPEYVRWTQWLFLKLFDRGLAYQAELPV NWCAALGTVLANEEVIDGKSERGSHPVVRLPLRQWTLRITAYADRLAEDLSGLDWPETREKQLHWIGRSEGAEVDFAIEG SADRLRIFTTRPDTLFGATYMVVAPEHPLLERFATAERRAEVLAYREATASRSELDRTALTKAKTGVFTGSYALHPLTGA RLPIWVADFVLGSYGTGAIMSVPGHDARDFEFARAFGLPVVEVVSVDGALNETGTWTEAFVGDGVAVRSRFLDGLRTPEA KAAMLAHLEREGLGARRVQYRLRDWVFSRQRYWGEPIPIYFPVELAEGSSDPRIHPHTIRYDQPLPVSEDELPVRLPELE DFKPSEDPAGPLARALDWRFFQRDGKWYARETNTMPQWAGSCWYYLRFIDPKNTQAIFSQQAYDAWMPVDLYVGGSEHAV LHLLYARFWHKVLFDCGLVTHAEPFKKLVHQGMILGENNEKMSKSRGNVVNPDDIVRQFGADALRMYEMFMGPLEAVKPW QTNGVIGVRRFLDRVWNMLAFVTEDAGGAPAELTEDARRLLHKTVKKVGEDIEALRFNTAVSAMMILANALAELPRVPLE AARVFARILSPFAPHLSEELWHRWGASESISLQPWPEYDPALTVDELVEMAIQVNGKVRGKLRLKRDATEAEAREAVHRE PELIPHLAGKTERRFVYVPGRIINIVVG >Mature_827_residues STERPKYDPANIEPLWQARWEEQRIFEARRHPGKPKAYILDMFPYPSGAGLHVGHPEGYTATDIVSRYLRMRGYDVLHPM GWDAFGLPAEQHALETGTHPADTTAKNVATFKRQLKSLGFSYDWSRELSTTDPEYVRWTQWLFLKLFDRGLAYQAELPVN WCAALGTVLANEEVIDGKSERGSHPVVRLPLRQWTLRITAYADRLAEDLSGLDWPETREKQLHWIGRSEGAEVDFAIEGS ADRLRIFTTRPDTLFGATYMVVAPEHPLLERFATAERRAEVLAYREATASRSELDRTALTKAKTGVFTGSYALHPLTGAR LPIWVADFVLGSYGTGAIMSVPGHDARDFEFARAFGLPVVEVVSVDGALNETGTWTEAFVGDGVAVRSRFLDGLRTPEAK AAMLAHLEREGLGARRVQYRLRDWVFSRQRYWGEPIPIYFPVELAEGSSDPRIHPHTIRYDQPLPVSEDELPVRLPELED FKPSEDPAGPLARALDWRFFQRDGKWYARETNTMPQWAGSCWYYLRFIDPKNTQAIFSQQAYDAWMPVDLYVGGSEHAVL HLLYARFWHKVLFDCGLVTHAEPFKKLVHQGMILGENNEKMSKSRGNVVNPDDIVRQFGADALRMYEMFMGPLEAVKPWQ TNGVIGVRRFLDRVWNMLAFVTEDAGGAPAELTEDARRLLHKTVKKVGEDIEALRFNTAVSAMMILANALAELPRVPLEA ARVFARILSPFAPHLSEELWHRWGASESISLQPWPEYDPALTVDELVEMAIQVNGKVRGKLRLKRDATEAEAREAVHREP ELIPHLAGKTERRFVYVPGRIINIVVG
Specific function: Unknown
COG id: COG0495
COG function: function code J; Leucyl-tRNA synthetase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I aminoacyl-tRNA synthetase family [H]
Homologues:
Organism=Homo sapiens, GI7661872, Length=904, Percent_Identity=32.853982300885, Blast_Score=427, Evalue=1e-119, Organism=Homo sapiens, GI94721239, Length=683, Percent_Identity=23.5724743777452, Blast_Score=96, Evalue=2e-19, Organism=Homo sapiens, GI94721241, Length=683, Percent_Identity=23.5724743777452, Blast_Score=96, Evalue=2e-19, Organism=Homo sapiens, GI5454158, Length=434, Percent_Identity=24.1935483870968, Blast_Score=92, Evalue=2e-18, Organism=Escherichia coli, GI1786861, Length=888, Percent_Identity=41.2162162162162, Blast_Score=634, Evalue=0.0, Organism=Escherichia coli, GI1790708, Length=385, Percent_Identity=25.4545454545455, Blast_Score=110, Evalue=5e-25, Organism=Caenorhabditis elegans, GI71997517, Length=840, Percent_Identity=27.7380952380952, Blast_Score=294, Evalue=2e-79, Organism=Caenorhabditis elegans, GI71997510, Length=814, Percent_Identity=28.2555282555283, Blast_Score=293, Evalue=2e-79, Organism=Caenorhabditis elegans, GI212645227, Length=338, Percent_Identity=28.698224852071, Blast_Score=125, Evalue=1e-28, Organism=Caenorhabditis elegans, GI17510661, Length=430, Percent_Identity=23.7209302325581, Blast_Score=97, Evalue=3e-20, Organism=Caenorhabditis elegans, GI17554638, Length=277, Percent_Identity=24.187725631769, Blast_Score=67, Evalue=3e-11, Organism=Saccharomyces cerevisiae, GI6323414, Length=870, Percent_Identity=34.0229885057471, Blast_Score=439, Evalue=1e-124, Organism=Saccharomyces cerevisiae, GI6321531, Length=390, Percent_Identity=26.4102564102564, Blast_Score=115, Evalue=4e-26, Organism=Drosophila melanogaster, GI21355409, Length=894, Percent_Identity=31.3199105145414, Blast_Score=373, Evalue=1e-103, Organism=Drosophila melanogaster, GI17864482, Length=414, Percent_Identity=24.8792270531401, Blast_Score=111, Evalue=2e-24, Organism=Drosophila melanogaster, GI24653289, Length=414, Percent_Identity=24.8792270531401, Blast_Score=111, Evalue=2e-24, Organism=Drosophila melanogaster, GI28574730, Length=774, Percent_Identity=23.7726098191214, Blast_Score=104, Evalue=3e-22, Organism=Drosophila melanogaster, GI24668547, Length=774, Percent_Identity=23.7726098191214, Blast_Score=104, Evalue=3e-22, Organism=Drosophila melanogaster, GI24668543, Length=774, Percent_Identity=23.7726098191214, Blast_Score=104, Evalue=3e-22,
Paralogues:
None
Copy number: 800 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002300 - InterPro: IPR002302 - InterPro: IPR014729 - InterPro: IPR009080 - InterPro: IPR013155 - InterPro: IPR009008 [H]
Pfam domain/function: PF08264 Anticodon_1; PF00133 tRNA-synt_1 [H]
EC number: =6.1.1.4 [H]
Molecular weight: Translated: 93938; Mature: 93807
Theoretical pI: Translated: 6.46; Mature: 6.46
Prosite motif: PS00178 AA_TRNA_LIGASE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTERPKYDPANIEPLWQARWEEQRIFEARRHPGKPKAYILDMFPYPSGAGLHVGHPEGY CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCEECCCCCCC TATDIVSRYLRMRGYDVLHPMGWDAFGLPAEQHALETGTHPADTTAKNVATFKRQLKSLG CHHHHHHHHHHHCCCCEECCCCCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCC FSYDWSRELSTTDPEYVRWTQWLFLKLFDRGLAYQAELPVNWCAALGTVLANEEVIDGKS CCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHCCCHHCCCCC ERGSHPVVRLPLRQWTLRITAYADRLAEDLSGLDWPETREKQLHWIGRSEGAEVDFAIEG CCCCCCEEEECHHHHEEHHHHHHHHHHHHHCCCCCCCCHHHHHEECCCCCCCEEEEEEEC SADRLRIFTTRPDTLFGATYMVVAPEHPLLERFATAERRAEVLAYREATASRSELDRTAL CCCEEEEEEECCCCHHCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH TKAKTGVFTGSYALHPLTGARLPIWVADFVLGSYGTGAIMSVPGHDARDFEFARAFGLPV HHHHCCEEECCCEECCCCCCCCHHHHHHHHHCCCCCCCEEECCCCCCCCHHHHHHHCCCE VEVVSVDGALNETGTWTEAFVGDGVAVRSRFLDGLRTPEAKAAMLAHLEREGLGARRVQY EEEEECCCCCCCCCCCHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHH RLRDWVFSRQRYWGEPIPIYFPVELAEGSSDPRIHPHTIRYDQPLPVSEDELPVRLPELE HHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCEECCCCCCCCCCCCCCEECCCCC DFKPSEDPAGPLARALDWRFFQRDGKWYARETNTMPQWAGSCWYYLRFIDPKNTQAIFSQ CCCCCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCEEEEEEEECCCCCHHHHHH QAYDAWMPVDLYVGGSEHAVLHLLYARFWHKVLFDCGLVTHAEPFKKLVHQGMILGENNE HHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCEEECCCCH KMSKSRGNVVNPDDIVRQFGADALRMYEMFMGPLEAVKPWQTNGVIGVRRFLDRVWNMLA HHHHCCCCCCCHHHHHHHHCHHHHHHHHHHHCHHHHCCCCCCCCHHHHHHHHHHHHHHHH FVTEDAGGAPAELTEDARRLLHKTVKKVGEDIEALRFNTAVSAMMILANALAELPRVPLE HHHCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH AARVFARILSPFAPHLSEELWHRWGASESISLQPWPEYDPALTVDELVEMAIQVNGKVRG HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEE KLRLKRDATEAEAREAVHREPELIPHLAGKTERRFVYVPGRIINIVVG EEEECCCCHHHHHHHHHHCCCHHHHHHCCCCCCEEEEECCEEEEEEEC >Mature Secondary Structure STERPKYDPANIEPLWQARWEEQRIFEARRHPGKPKAYILDMFPYPSGAGLHVGHPEGY CCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCEECCCCCCC TATDIVSRYLRMRGYDVLHPMGWDAFGLPAEQHALETGTHPADTTAKNVATFKRQLKSLG CHHHHHHHHHHHCCCCEECCCCCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCC FSYDWSRELSTTDPEYVRWTQWLFLKLFDRGLAYQAELPVNWCAALGTVLANEEVIDGKS CCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHCCCHHCCCCC ERGSHPVVRLPLRQWTLRITAYADRLAEDLSGLDWPETREKQLHWIGRSEGAEVDFAIEG CCCCCCEEEECHHHHEEHHHHHHHHHHHHHCCCCCCCCHHHHHEECCCCCCCEEEEEEEC SADRLRIFTTRPDTLFGATYMVVAPEHPLLERFATAERRAEVLAYREATASRSELDRTAL CCCEEEEEEECCCCHHCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH TKAKTGVFTGSYALHPLTGARLPIWVADFVLGSYGTGAIMSVPGHDARDFEFARAFGLPV HHHHCCEEECCCEECCCCCCCCHHHHHHHHHCCCCCCCEEECCCCCCCCHHHHHHHCCCE VEVVSVDGALNETGTWTEAFVGDGVAVRSRFLDGLRTPEAKAAMLAHLEREGLGARRVQY EEEEECCCCCCCCCCCHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHH RLRDWVFSRQRYWGEPIPIYFPVELAEGSSDPRIHPHTIRYDQPLPVSEDELPVRLPELE HHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCEECCCCCCCCCCCCCCEECCCCC DFKPSEDPAGPLARALDWRFFQRDGKWYARETNTMPQWAGSCWYYLRFIDPKNTQAIFSQ CCCCCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCEEEEEEEECCCCCHHHHHH QAYDAWMPVDLYVGGSEHAVLHLLYARFWHKVLFDCGLVTHAEPFKKLVHQGMILGENNE HHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCEEECCCCH KMSKSRGNVVNPDDIVRQFGADALRMYEMFMGPLEAVKPWQTNGVIGVRRFLDRVWNMLA HHHHCCCCCCCHHHHHHHHCHHHHHHHHHHHCHHHHCCCCCCCCHHHHHHHHHHHHHHHH FVTEDAGGAPAELTEDARRLLHKTVKKVGEDIEALRFNTAVSAMMILANALAELPRVPLE HHHCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH AARVFARILSPFAPHLSEELWHRWGASESISLQPWPEYDPALTVDELVEMAIQVNGKVRG HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEE KLRLKRDATEAEAREAVHREPELIPHLAGKTERRFVYVPGRIINIVVG EEEECCCCHHHHHHHHHHCCCHHHHHHCCCCCCEEEEECCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA