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The map label for this gene is crtI [H]

Identifier: 108758926

GI number: 108758926

Start: 4966568

End: 4968100

Strand: Reverse

Name: crtI [H]

Synonym: MXAN_4052

Alternate gene names: 108758926

Gene position: 4968100-4966568 (Counterclockwise)

Preceding gene: 108756903

Following gene: 108759560

Centisome position: 54.36

GC content: 67.25

Gene sequence:

>1533_bases
ATGGATCGAGTCACCGTGCTGAGACCCTCTGGGAAGGCTGGCCTGGCCGCACGAAGCGGTGAACGACGCGCAATCGTGAT
TGGCAGTGGTTTCGGCGGATTGGCCGCGGCCATCCGGCTGGCGGCGCGTGGGTGGCGCGTCACGGTGCTCGAGCGGATGG
ACAGCCCGGGCGGGCGGGCGAACGCCTTCCAGCAGGACGGCTTCACGTTCGACGCGGGCCCCACGGTGATTACGTGTCCG
CACCTGCTGGAGGAGCTGTGGGCGCTAGGGGGACAACGCATGGCGGACCACGTGGAGCTACGGCCCGTGGCGCCGCTGTA
CCGGATGCGGTTCCCGGATGGCTCCACGTTCGACTACCACACGGACCGCGAGGCGATGCGCCAGTCCGTGCGGCGACTGT
CTCCCCGGGATGAGGCGGGATTCCTGGCGCTGTGCGCCCGCGTGGAGCGGATGTACGAGGCGGGCATTGGGCCCCTGATG
AGCACGCCGGTGCCGGACGTGCTGAGTCTGGCGCCCTTCACCCCCGCGTTGGTGCGGGACGAGGCGTTCCGGTCCATGTT
CGGCCTGGTGTCGAAGCACATCCGGGACGAGCGGTTGCAGCAGGCGTTGAGCTTCCATCCGCTGCTCATTGGCGGCAGTC
CCTTCGCGACCGCGAGCGCGGTGTACACGTCGATTCAATTCGTGGAGCGGCGCTGGGGGGCGTTCTTCCCGGTGGGCGGC
ACCGGGGCGCTGGTTCGGGGTCTGGTGGAACTGCTGGAGTCCCTGGGCGGCGAGGTCCGTTACGGCAGCGAGGTGACTGA
GATTGCGTTGGAGGGGCGGAAGGCGACGGGCGTGAGGCTCGGGGACGGTACGGGGCTGGCGGCGGACGTGGTGGTGTCGA
ACGCGGACGCGGCGTGGACGTACCGGTACCTGGTTCCGGGGCATGTTCGGAAGCACTGGACGGACGAGCGCATCAACCGG
GCTCGGTACTCGATGAGCGCGTTCCTCTGGTACTTCGGGACGCGGCGTCAGTACCCGGAGGTCGCGCACCACACGCTGCT
GTTCGGCAAGGACTTCCGGGGGATGTTCTCAGGACTGGAAGGCCCTGGACAGCCGTCAGCGGACCCCTTGCTCTATCTCC
ACAGGCCCACGGCGACAGACGCGGCGCTGGCTCCGTCAGGGCATGATGCTTTCTATGTATTGGCTCCGGTTCCGCACCTG
GGGACAGGGGCGGAATGGAAGCAGCGGGCCGAGGCTTTCCGACGAGAGTTGGAGGCGCGACTGTCGCGGACCGTCTTGCC
AGGGCTGGGTTCGGAGTTGATGACGTCTCGGATGGCGACGCCGGAGTATTTCCGTGACGAACTGCGATCCTTTAAAGGGG
CCGCATTCAGCTTCGCGCCGACGCTTTGGCAGACCACGTTCCTTCGGGCACAGGCCCGGAGCGAGGACGTTGACTGCCTC
TACATGGTTGGAGCAGGAACGCACCCTGGAGCGGGGCTCCCTGCCGTGCTGTGCTCTGCCAAGATCGTGGACACAGTCAT
TCCGCCGACGTAG

Upstream 100 bases:

>100_bases
GGAGGGTAGCCCTGGCACTGGGGGCTCGCAACAGAGCGCGGGCGATGTGAGGCCGGATGCCTGTCCGCGGACGGAGTGGA
GTGGGCCTCGCGGGTGTGCG

Downstream 100 bases:

>100_bases
CGCTGTTCACGTGAGCCAGCATTTGTCTGGCTTTGGCTTTTGAGGCCGCATGGATGGCGGGCTTGAGAACGATCATCATC
GCGGAGCAGACCACCCGAAG

Product: putative phytoene dehydrogenase

Products: NA

Alternate protein names: Phytoene desaturase [H]

Number of amino acids: Translated: 510; Mature: 510

Protein sequence:

>510_residues
MDRVTVLRPSGKAGLAARSGERRAIVIGSGFGGLAAAIRLAARGWRVTVLERMDSPGGRANAFQQDGFTFDAGPTVITCP
HLLEELWALGGQRMADHVELRPVAPLYRMRFPDGSTFDYHTDREAMRQSVRRLSPRDEAGFLALCARVERMYEAGIGPLM
STPVPDVLSLAPFTPALVRDEAFRSMFGLVSKHIRDERLQQALSFHPLLIGGSPFATASAVYTSIQFVERRWGAFFPVGG
TGALVRGLVELLESLGGEVRYGSEVTEIALEGRKATGVRLGDGTGLAADVVVSNADAAWTYRYLVPGHVRKHWTDERINR
ARYSMSAFLWYFGTRRQYPEVAHHTLLFGKDFRGMFSGLEGPGQPSADPLLYLHRPTATDAALAPSGHDAFYVLAPVPHL
GTGAEWKQRAEAFRRELEARLSRTVLPGLGSELMTSRMATPEYFRDELRSFKGAAFSFAPTLWQTTFLRAQARSEDVDCL
YMVGAGTHPGAGLPAVLCSAKIVDTVIPPT

Sequences:

>Translated_510_residues
MDRVTVLRPSGKAGLAARSGERRAIVIGSGFGGLAAAIRLAARGWRVTVLERMDSPGGRANAFQQDGFTFDAGPTVITCP
HLLEELWALGGQRMADHVELRPVAPLYRMRFPDGSTFDYHTDREAMRQSVRRLSPRDEAGFLALCARVERMYEAGIGPLM
STPVPDVLSLAPFTPALVRDEAFRSMFGLVSKHIRDERLQQALSFHPLLIGGSPFATASAVYTSIQFVERRWGAFFPVGG
TGALVRGLVELLESLGGEVRYGSEVTEIALEGRKATGVRLGDGTGLAADVVVSNADAAWTYRYLVPGHVRKHWTDERINR
ARYSMSAFLWYFGTRRQYPEVAHHTLLFGKDFRGMFSGLEGPGQPSADPLLYLHRPTATDAALAPSGHDAFYVLAPVPHL
GTGAEWKQRAEAFRRELEARLSRTVLPGLGSELMTSRMATPEYFRDELRSFKGAAFSFAPTLWQTTFLRAQARSEDVDCL
YMVGAGTHPGAGLPAVLCSAKIVDTVIPPT
>Mature_510_residues
MDRVTVLRPSGKAGLAARSGERRAIVIGSGFGGLAAAIRLAARGWRVTVLERMDSPGGRANAFQQDGFTFDAGPTVITCP
HLLEELWALGGQRMADHVELRPVAPLYRMRFPDGSTFDYHTDREAMRQSVRRLSPRDEAGFLALCARVERMYEAGIGPLM
STPVPDVLSLAPFTPALVRDEAFRSMFGLVSKHIRDERLQQALSFHPLLIGGSPFATASAVYTSIQFVERRWGAFFPVGG
TGALVRGLVELLESLGGEVRYGSEVTEIALEGRKATGVRLGDGTGLAADVVVSNADAAWTYRYLVPGHVRKHWTDERINR
ARYSMSAFLWYFGTRRQYPEVAHHTLLFGKDFRGMFSGLEGPGQPSADPLLYLHRPTATDAALAPSGHDAFYVLAPVPHL
GTGAEWKQRAEAFRRELEARLSRTVLPGLGSELMTSRMATPEYFRDELRSFKGAAFSFAPTLWQTTFLRAQARSEDVDCL
YMVGAGTHPGAGLPAVLCSAKIVDTVIPPT

Specific function: This enzyme converts phytoene into lycopene via the intermediaries of phytofluene, zeta-carotene and neurosporene by the introduction of four double bonds [H]

COG id: COG1233

COG function: function code Q; Phytoene dehydrogenase and related proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the carotenoid/retinoid oxidoreductase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002937
- InterPro:   IPR008150
- InterPro:   IPR014105 [H]

Pfam domain/function: PF01593 Amino_oxidase [H]

EC number: NA

Molecular weight: Translated: 55841; Mature: 55841

Theoretical pI: Translated: 9.02; Mature: 9.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDRVTVLRPSGKAGLAARSGERRAIVIGSGFGGLAAAIRLAARGWRVTVLERMDSPGGRA
CCCEEEECCCCCCCCEECCCCCEEEEEECCCHHHHHHHHHHHCCCEEEEEHHCCCCCCCC
NAFQQDGFTFDAGPTVITCPHLLEELWALGGQRMADHVELRPVAPLYRMRFPDGSTFDYH
CCCCCCCEEECCCCCEEECHHHHHHHHHCCCCHHHHCCCCCCCCHHHHEECCCCCCCCCC
TDREAMRQSVRRLSPRDEAGFLALCARVERMYEAGIGPLMSTPVPDVLSLAPFTPALVRD
CCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCHHHHHH
EAFRSMFGLVSKHIRDERLQQALSFHPLLIGGSPFATASAVYTSIQFVERRWGAFFPVGG
HHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCC
TGALVRGLVELLESLGGEVRYGSEVTEIALEGRKATGVRLGDGTGLAADVVVSNADAAWT
HHHHHHHHHHHHHHCCCCEECCCHHHHHHHCCCCCCCEEECCCCCCEEEEEEECCCCCEE
YRYLVPGHVRKHWTDERINRARYSMSAFLWYFGTRRQYPEVAHHTLLFGKDFRGMFSGLE
EEEECCCHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHEECCHHHHHHCCCC
GPGQPSADPLLYLHRPTATDAALAPSGHDAFYVLAPVPHLGTGAEWKQRAEAFRRELEAR
CCCCCCCCCEEEEECCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHH
LSRTVLPGLGSELMTSRMATPEYFRDELRSFKGAAFSFAPTLWQTTFLRAQARSEDVDCL
HHHHHCCCCCHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCEE
YMVGAGTHPGAGLPAVLCSAKIVDTVIPPT
EEEECCCCCCCCCHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MDRVTVLRPSGKAGLAARSGERRAIVIGSGFGGLAAAIRLAARGWRVTVLERMDSPGGRA
CCCEEEECCCCCCCCEECCCCCEEEEEECCCHHHHHHHHHHHCCCEEEEEHHCCCCCCCC
NAFQQDGFTFDAGPTVITCPHLLEELWALGGQRMADHVELRPVAPLYRMRFPDGSTFDYH
CCCCCCCEEECCCCCEEECHHHHHHHHHCCCCHHHHCCCCCCCCHHHHEECCCCCCCCCC
TDREAMRQSVRRLSPRDEAGFLALCARVERMYEAGIGPLMSTPVPDVLSLAPFTPALVRD
CCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCHHHHHH
EAFRSMFGLVSKHIRDERLQQALSFHPLLIGGSPFATASAVYTSIQFVERRWGAFFPVGG
HHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCC
TGALVRGLVELLESLGGEVRYGSEVTEIALEGRKATGVRLGDGTGLAADVVVSNADAAWT
HHHHHHHHHHHHHHCCCCEECCCHHHHHHHCCCCCCCEEECCCCCCEEEEEEECCCCCEE
YRYLVPGHVRKHWTDERINRARYSMSAFLWYFGTRRQYPEVAHHTLLFGKDFRGMFSGLE
EEEECCCHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHEECCHHHHHHCCCC
GPGQPSADPLLYLHRPTATDAALAPSGHDAFYVLAPVPHLGTGAEWKQRAEAFRRELEAR
CCCCCCCCCEEEEECCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHH
LSRTVLPGLGSELMTSRMATPEYFRDELRSFKGAAFSFAPTLWQTTFLRAQARSEDVDCL
HHHHHCCCCCHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCEE
YMVGAGTHPGAGLPAVLCSAKIVDTVIPPT
EEEECCCCCCCCCHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2254247 [H]