Click here to switch to the map view.

The map label for this gene is yebA [C]

Identifier: 108759514

GI number: 108759514

Start: 2407909

End: 2408925

Strand: Direct

Name: yebA [C]

Synonym: MXAN_2075

Alternate gene names: 108759514

Gene position: 2407909-2408925 (Clockwise)

Preceding gene: 108759305

Following gene: 108758286

Centisome position: 26.35

GC content: 73.55

Gene sequence:

>1017_bases
GTGGCCATGTTCCCGCGCCAGGCGAAAGGACTGCTGGACTTCTGCATGGCGACGCTGTGCTTGTGGGCGGCGTACCACCA
CACGCCGGCGGGCGCGCTGGTGCGCAAGGCCACGGCATGGGCCACGGGGACGCGCAGCAGCGCGCGGCCCTTGCTCGCGT
ACTACGACGGCGTCAGTGGCACCTCGCTGTCACCGCCATTGATGGCTCCCGACGTTCCTCTGTCCCGGGCCCTCACGGAC
GCGGAGGCCCTGGCCTGGGGAACCCACCTGGCGCTCAAGGGTGCCCAGGTGCGAGCCCGCCAGCCCGCGCTGGAGCTGGC
CGCGGAGCTGGGCGTCCCCGCCGCGTCGCTGTTGGATCCGCAGACGGGCCCGGCGGCCGCGCGCAGCCTGCACACCGCGC
TGTCCAAGGACTTTCCAGGGGAGGAGGCCCGGCTCACGGCGCTCTTCGCGGGCCGCGTCCCCGCGCGCTACGCGCTGGAG
CGGGTGGAGGCGGAGGGTGGGGCGCCCACGCTGGAGCGCCTGTCGGGTCAGCTCCCGCCGGGCTTCGAGGACGCGTCCGT
GGGCGCCGCGCAGGCCCTGGCGCTGGCCACCGCCTTCGGGCTCGCGTGGCCCGTTCATGAGAGCGCGCGTGTAACGAGTC
CCTTCGGCGATCGCTTCCACCCGGTGCTGGGGCGCCGGAAGATGCACACCGGTGTGGACCTGGGCGTGCCGGTGGGGACG
CCCGTGGTGGCGGTGGCGGATGGCGTCGTCCGGCGTGCCAGCGAGGACGCCGTGAATGGCCGCGTGCTCGTGGTGGACCA
CGGGCGGGGCGTCACGACGGCGTACTGTCACAACTCGGAGCTGCTGGTGAAGGTGGGACAGCGCGTGCGCCGGGGAGAAC
GGGTGGCGCATTCGGGCAACACGGGACGCTCCACCGGTCCCCACCTGCACTACCAGTTGGAGCTGGCGGCGCGGCCCATG
GACCCGCTGAAGTTCCGCACCGCCTTGCGGCCCGTGGCGAAGGACCCTGCGCCCTGA

Upstream 100 bases:

>100_bases
AGCGGCCTTGCGGCGCGGACTGCTGGGCTGCGCGGTCGTGGTGCCGCTGGCCGTGGCGGCGGTGGTGGATGCGACGCCCG
TGCTGTCCTTCTTCCGGTAG

Downstream 100 bases:

>100_bases
GGGGCCGACGCGCGAGGTTGTCACGCGGCCGTGGCACGAAGCGGGGGAAGCTGTGTTAGTCCCAGCGCATGTCTTCCCCC
CTCACGGTGAAGGTGCGCCG

Product: M23 peptidase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 338; Mature: 337

Protein sequence:

>338_residues
MAMFPRQAKGLLDFCMATLCLWAAYHHTPAGALVRKATAWATGTRSSARPLLAYYDGVSGTSLSPPLMAPDVPLSRALTD
AEALAWGTHLALKGAQVRARQPALELAAELGVPAASLLDPQTGPAAARSLHTALSKDFPGEEARLTALFAGRVPARYALE
RVEAEGGAPTLERLSGQLPPGFEDASVGAAQALALATAFGLAWPVHESARVTSPFGDRFHPVLGRRKMHTGVDLGVPVGT
PVVAVADGVVRRASEDAVNGRVLVVDHGRGVTTAYCHNSELLVKVGQRVRRGERVAHSGNTGRSTGPHLHYQLELAARPM
DPLKFRTALRPVAKDPAP

Sequences:

>Translated_338_residues
MAMFPRQAKGLLDFCMATLCLWAAYHHTPAGALVRKATAWATGTRSSARPLLAYYDGVSGTSLSPPLMAPDVPLSRALTD
AEALAWGTHLALKGAQVRARQPALELAAELGVPAASLLDPQTGPAAARSLHTALSKDFPGEEARLTALFAGRVPARYALE
RVEAEGGAPTLERLSGQLPPGFEDASVGAAQALALATAFGLAWPVHESARVTSPFGDRFHPVLGRRKMHTGVDLGVPVGT
PVVAVADGVVRRASEDAVNGRVLVVDHGRGVTTAYCHNSELLVKVGQRVRRGERVAHSGNTGRSTGPHLHYQLELAARPM
DPLKFRTALRPVAKDPAP
>Mature_337_residues
AMFPRQAKGLLDFCMATLCLWAAYHHTPAGALVRKATAWATGTRSSARPLLAYYDGVSGTSLSPPLMAPDVPLSRALTDA
EALAWGTHLALKGAQVRARQPALELAAELGVPAASLLDPQTGPAAARSLHTALSKDFPGEEARLTALFAGRVPARYALER
VEAEGGAPTLERLSGQLPPGFEDASVGAAQALALATAFGLAWPVHESARVTSPFGDRFHPVLGRRKMHTGVDLGVPVGTP
VVAVADGVVRRASEDAVNGRVLVVDHGRGVTTAYCHNSELLVKVGQRVRRGERVAHSGNTGRSTGPHLHYQLELAARPMD
PLKFRTALRPVAKDPAP

Specific function: Could Be Involved In Cell Wall Degradation Or Formation. [C]

COG id: COG0739

COG function: function code M; Membrane proteins related to metalloendopeptidases

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M23B family [H]

Homologues:

Organism=Escherichia coli, GI87081989, Length=142, Percent_Identity=44.3661971830986, Blast_Score=117, Evalue=1e-27,
Organism=Escherichia coli, GI87082174, Length=123, Percent_Identity=31.7073170731707, Blast_Score=65, Evalue=5e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR007340
- InterPro:   IPR016047
- InterPro:   IPR002886 [H]

Pfam domain/function: PF04225 OapA; PF01551 Peptidase_M23 [H]

EC number: 3.4.24.- [C]

Molecular weight: Translated: 35655; Mature: 35524

Theoretical pI: Translated: 10.05; Mature: 10.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAMFPRQAKGLLDFCMATLCLWAAYHHTPAGALVRKATAWATGTRSSARPLLAYYDGVSG
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCEEEEECCCCC
TSLSPPLMAPDVPLSRALTDAEALAWGTHLALKGAQVRARQPALELAAELGVPAASLLDP
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHEECCCHHHHHCHHHHHHHHHCCCHHHHCCC
QTGPAAARSLHTALSKDFPGEEARLTALFAGRVPARYALERVEAEGGAPTLERLSGQLPP
CCCHHHHHHHHHHHHCCCCCCHHEEEEEEECCCCHHHHHHHHHCCCCCCHHHHHCCCCCC
GFEDASVGAAQALALATAFGLAWPVHESARVTSPFGDRFHPVLGRRKMHTGVDLGVPVGT
CCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHCCCHHCCCCCCCCCCCC
PVVAVADGVVRRASEDAVNGRVLVVDHGRGVTTAYCHNSELLVKVGQRVRRGERVAHSGN
CHHHHHHHHHHHCCHHCCCCEEEEEECCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCC
TGRSTGPHLHYQLELAARPMDPLKFRTALRPVAKDPAP
CCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
AMFPRQAKGLLDFCMATLCLWAAYHHTPAGALVRKATAWATGTRSSARPLLAYYDGVSG
CCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCEEEEECCCCC
TSLSPPLMAPDVPLSRALTDAEALAWGTHLALKGAQVRARQPALELAAELGVPAASLLDP
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHEECCCHHHHHCHHHHHHHHHCCCHHHHCCC
QTGPAAARSLHTALSKDFPGEEARLTALFAGRVPARYALERVEAEGGAPTLERLSGQLPP
CCCHHHHHHHHHHHHCCCCCCHHEEEEEEECCCCHHHHHHHHHCCCCCCHHHHHCCCCCC
GFEDASVGAAQALALATAFGLAWPVHESARVTSPFGDRFHPVLGRRKMHTGVDLGVPVGT
CCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHCCCHHCCCCCCCCCCCC
PVVAVADGVVRRASEDAVNGRVLVVDHGRGVTTAYCHNSELLVKVGQRVRRGERVAHSGN
CHHHHHHHHHHHCCHHCCCCEEEEEECCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCC
TGRSTGPHLHYQLELAARPMDPLKFRTALRPVAKDPAP
CCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]