| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108759498
Identifier: 108759498
GI number: 108759498
Start: 3244821
End: 3245201
Strand: Direct
Name: 108759498
Synonym: MXAN_2788
Alternate gene names: NA
Gene position: 3244821-3245201 (Clockwise)
Preceding gene: 108760263
Following gene: 108763300
Centisome position: 35.5
GC content: 71.92
Gene sequence:
>381_bases GTGAGCACGGGGGGGGAGACGGCGGGGCGCAAGCGCGTCTGGTCGACGCCGGCCAACGTGAAGCTGCTCCCGGTGAGCGC CCTGGAGGACCCCGGGGCGCGCAACCTCGTCCTCCAGATTGGGGACGCCTTCTTCCACGGCTTCCTGGTGCGCAAGGGTG ACGCGGTCCACGGCTACGTGGACCGGTGTCCCCACGCGGGTCTGCCGCTCGCGCGCGAACTGGACCGCTACCTGACGCCG GACAAGGGGCTCATCGTCTGTGCCTGGCACGGGGCTCTGTTCCAGGTGGAGGACGGGCTGTGCGTGGGCGGGCCGTGTTC GGGCGGGCGACTCACGCCGTGGCCGGTGACGGTGCGTGACGGCATCGTCGTCACCGGCTGA
Upstream 100 bases:
>100_bases ATCCGTCCCACGCGCTTCGCCATGGAGACGCCCGCGCTCCAGCAGGACTACGACGCGTGCTGGGCGGGCTTCCAGAAGGC GAAGTTGCCTTGAGGGCCGC
Downstream 100 bases:
>100_bases GCACGCGGCTCAGGCGTGCGCTGCGACGGGCGCGGCCTCCGCCTCCGTCTCCGCGTCGAGGGAGACCAGGACCTGCTTCT CCCAGGCGCGGCTCTTCCAG
Product: Rieske (2Fe-2S) domain-containing protein
Products: NA
Alternate protein names: Rieske; Rieske Domain Protein; Rieske Region; Rieske Iron-Sulfur Domain Protein; Rieske Iron-Sulfur Domain-Containing Protein; Ferredoxin Rieske 2Fe-2S Family; Rieske 2Fe-2S Family Protein; Ferredoxin; Nitrite Reductase Ferredoxin Subunit
Number of amino acids: Translated: 126; Mature: 125
Protein sequence:
>126_residues MSTGGETAGRKRVWSTPANVKLLPVSALEDPGARNLVLQIGDAFFHGFLVRKGDAVHGYVDRCPHAGLPLARELDRYLTP DKGLIVCAWHGALFQVEDGLCVGGPCSGGRLTPWPVTVRDGIVVTG
Sequences:
>Translated_126_residues MSTGGETAGRKRVWSTPANVKLLPVSALEDPGARNLVLQIGDAFFHGFLVRKGDAVHGYVDRCPHAGLPLARELDRYLTP DKGLIVCAWHGALFQVEDGLCVGGPCSGGRLTPWPVTVRDGIVVTG >Mature_125_residues STGGETAGRKRVWSTPANVKLLPVSALEDPGARNLVLQIGDAFFHGFLVRKGDAVHGYVDRCPHAGLPLARELDRYLTPD KGLIVCAWHGALFQVEDGLCVGGPCSGGRLTPWPVTVRDGIVVTG
Specific function: Unknown
COG id: COG2146
COG function: function code PR; Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13404; Mature: 13272
Theoretical pI: Translated: 7.98; Mature: 7.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTGGETAGRKRVWSTPANVKLLPVSALEDPGARNLVLQIGDAFFHGFLVRKGDAVHGYV CCCCCCCCCCCEEECCCCCEEEEEECCCCCCCCCEEEEEECHHHHHEEEEECCCCEECHH DRCPHAGLPLARELDRYLTPDKGLIVCAWHGALFQVEDGLCVGGPCSGGRLTPWPVTVRD HCCCCCCCCHHHHHHHHCCCCCCEEEEEECCEEEEECCCEEECCCCCCCCCCCCEEEECC GIVVTG CEEEEC >Mature Secondary Structure STGGETAGRKRVWSTPANVKLLPVSALEDPGARNLVLQIGDAFFHGFLVRKGDAVHGYV CCCCCCCCCCEEECCCCCEEEEEECCCCCCCCCEEEEEECHHHHHEEEEECCCCEECHH DRCPHAGLPLARELDRYLTPDKGLIVCAWHGALFQVEDGLCVGGPCSGGRLTPWPVTVRD HCCCCCCCCHHHHHHHHCCCCCCEEEEEECCEEEEECCCEEECCCCCCCCCCCCEEEECC GIVVTG CEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA