| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is prpE [H]
Identifier: 108759347
GI number: 108759347
Start: 1771438
End: 1772145
Strand: Reverse
Name: prpE [H]
Synonym: MXAN_1509
Alternate gene names: 108759347
Gene position: 1772145-1771438 (Counterclockwise)
Preceding gene: 108763629
Following gene: 108757107
Centisome position: 19.39
GC content: 68.22
Gene sequence:
>708_bases ATGTCCCGCCGCACCATCGTCATCGGAGACCTTCACGGCTGCTACGACGAAGCCGTGGAGCTGCTCGGCAAGGTGGGCGC GACCTCCAGCGACCGGATCATCTTCGCGGGTGACCTGGTGGACCGGGGCCCGAAGCGCCGCGAGTGCGTGGAGTTGGCCA TGCGGCACGAGGCCATCCTCGGCAACCACGAGGAGAAGCACCTCCAGCAGCGCCACCGGGCGGACGAGCGGTTGCATCCC GACCACCTCGAGACTCGCCGGGTGCTCCAACCCGGGCACTACGACTGGATGGCCCGGCTGCCACGCTACCTGCGGCTGCC GGAGCACAACGCCATCGTGGTGCACGCCGGCATGCTGCCGGACATCCCTGTCGAGAAACAGGACCCGTACCACCTGCTCC ATGCCCAGTGCATCCGGCCTCCGGCGTCCAAGAGCTACTGGCCGTCCAAGGCACCTCATGGCTGGACCTTCTGGACGCAC CACTGGAAGGGCCCGGAGCGGGTCATCTTCGGTCACACCGTCTTCGACGCGCCGCTCGTCACCGAGCACGCGGTGGGTAT CGACACCGGGTGCGTCTATGGACGGTCGCTGACGGCGGTGGTGCTCCCCACCTGGGAGCTCGTCTCGGTGCCGGCCCGGA GTACGTACCGGGGCGGCAAGGACGTGGCCCGGATTCCGGTCCACGGCGACGTGTCCGTCTTCTCGTAA
Upstream 100 bases:
>100_bases CATGGGCGTATGCCGACGGGTGGTCCGTCACTGATCCTGGAATCAGCCAACTGGCTTCTTCACTCGGGCGCTCATTTTTC GCTTCTTGAGGATTCGCGTC
Downstream 100 bases:
>100_bases TCAATTTCGCGCCCGGCCGACGGGGTCCAACACGCCATACAGCTGTCGCGGGTTCGAATCCCGCCGGAGCCGTTCGTGGC TCCGTAGCTCAGCGGTAGAG
Product: serine/threonine protein phosphatase family protein
Products: NA
Alternate protein names: Ap4A hydrolase; Diadenosine 5',5'''-P1,P4-tetraphosphate asymmetrical hydrolase; Diadenosine tetraphosphatase [H]
Number of amino acids: Translated: 235; Mature: 234
Protein sequence:
>235_residues MSRRTIVIGDLHGCYDEAVELLGKVGATSSDRIIFAGDLVDRGPKRRECVELAMRHEAILGNHEEKHLQQRHRADERLHP DHLETRRVLQPGHYDWMARLPRYLRLPEHNAIVVHAGMLPDIPVEKQDPYHLLHAQCIRPPASKSYWPSKAPHGWTFWTH HWKGPERVIFGHTVFDAPLVTEHAVGIDTGCVYGRSLTAVVLPTWELVSVPARSTYRGGKDVARIPVHGDVSVFS
Sequences:
>Translated_235_residues MSRRTIVIGDLHGCYDEAVELLGKVGATSSDRIIFAGDLVDRGPKRRECVELAMRHEAILGNHEEKHLQQRHRADERLHP DHLETRRVLQPGHYDWMARLPRYLRLPEHNAIVVHAGMLPDIPVEKQDPYHLLHAQCIRPPASKSYWPSKAPHGWTFWTH HWKGPERVIFGHTVFDAPLVTEHAVGIDTGCVYGRSLTAVVLPTWELVSVPARSTYRGGKDVARIPVHGDVSVFS >Mature_234_residues SRRTIVIGDLHGCYDEAVELLGKVGATSSDRIIFAGDLVDRGPKRRECVELAMRHEAILGNHEEKHLQQRHRADERLHPD HLETRRVLQPGHYDWMARLPRYLRLPEHNAIVVHAGMLPDIPVEKQDPYHLLHAQCIRPPASKSYWPSKAPHGWTFWTHH WKGPERVIFGHTVFDAPLVTEHAVGIDTGCVYGRSLTAVVLPTWELVSVPARSTYRGGKDVARIPVHGDVSVFS
Specific function: Asymmetrically hydrolyzes Ap4p to yield AMP and ATP [H]
COG id: COG0639
COG function: function code T; Diadenosine tetraphosphatase and related serine/threonine protein phosphatases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the prpE family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004843 - InterPro: IPR006186 [H]
Pfam domain/function: PF00149 Metallophos [H]
EC number: =3.6.1.17 [H]
Molecular weight: Translated: 26658; Mature: 26527
Theoretical pI: Translated: 8.09; Mature: 8.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRRTIVIGDLHGCYDEAVELLGKVGATSSDRIIFAGDLVDRGPKRRECVELAMRHEAIL CCCCEEEEECCHHHHHHHHHHHHHHCCCCCCCEEEECCHHCCCCCHHHHHHHHHHHHHHH GNHEEKHLQQRHRADERLHPDHLETRRVLQPGHYDWMARLPRYLRLPEHNAIVVHAGMLP CCCHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCC DIPVEKQDPYHLLHAQCIRPPASKSYWPSKAPHGWTFWTHHWKGPERVIFGHTVFDAPLV CCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEECEEECCCCH TEHAVGIDTGCVYGRSLTAVVLPTWELVSVPARSTYRGGKDVARIPVHGDVSVFS HHHHCCCCCCCCCCCCEEEEEECCHHHEECCCCCCCCCCCCEEEECCCCCCEECC >Mature Secondary Structure SRRTIVIGDLHGCYDEAVELLGKVGATSSDRIIFAGDLVDRGPKRRECVELAMRHEAIL CCCEEEEECCHHHHHHHHHHHHHHCCCCCCCEEEECCHHCCCCCHHHHHHHHHHHHHHH GNHEEKHLQQRHRADERLHPDHLETRRVLQPGHYDWMARLPRYLRLPEHNAIVVHAGMLP CCCHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCC DIPVEKQDPYHLLHAQCIRPPASKSYWPSKAPHGWTFWTHHWKGPERVIFGHTVFDAPLV CCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEECEEECCCCH TEHAVGIDTGCVYGRSLTAVVLPTWELVSVPARSTYRGGKDVARIPVHGDVSVFS HHHHCCCCCCCCCCCCEEEEEECCHHHEECCCCCCCCCCCCEEEECCCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12235376 [H]