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The map label for this gene is ybfP [H]

Identifier: 108763629

GI number: 108763629

Start: 1774533

End: 1775705

Strand: Reverse

Name: ybfP [H]

Synonym: MXAN_1512

Alternate gene names: 108763629

Gene position: 1775705-1774533 (Counterclockwise)

Preceding gene: 108762550

Following gene: 108759347

Centisome position: 19.43

GC content: 69.82

Gene sequence:

>1173_bases
ATGGACTTCCGGAAGAAACTCGCCGCCCTGCTGCTCGCGCTGGCCTCCACCGGGGCCGGTGCGCAGCCGTCGGAAGGCGC
CCAGAAGCTGCCAGTCGGCTGGTATGTGACGGAGAGCGCCCCCAAGCGCTACGAGGCCGGCGTGGACAGCAGCGCCACGT
GCGAAGGCAACCGCAGCGCCTACCTCCGCTCGCTGTCGCCGGATGAGAATGGCTACGGCACCTTCATGCAGGCCTTCGGC
GCGCATGACTTCCGGGGCAAGCGGCTGCGCTTCTCCGGCGCGCTCCGCATCAAGGACGTGGAGGGCTGGGCAGGCCTGTG
GATGCGCGTGGAAGGGCCCGACCCGAAGCAGCCCCTGGCCTTCGACAACATGCAGTCACGCGCCCTGGTGGGCACCGCGG
GCTGCAAGCGCTACGACGTGGTGCTGGACGTCCCGAAGGAAGCCACCACCATCATGGCTGGCCTCATCATGAGCGGTACG
GGACAGGCCTGGCTGGACGGCGTGCGCTTCGAGGTCGTCGACACGTCCGTGCCGGTGACGGACCTGCTGGCCTCGCGGCC
GGTGGTGGCCGCCGCCGGTCCGTCAGGACTGGAGGACGAACCCGCGCCGGTGGCGAAGAACGACCAACTGCCACTGGGCC
GCGTGGGTGACGTCTGGTTCAACCACGGCCGCATCGCCGCGGACAAGCCGTACACCCGGCGCAAGGACGGCGTCTGGGTA
AGCATCCTCGGCGAGGAGGTCTACGAGCACGGCATCGCGGTGACGGGCACGCTGGGACAGCGCGCGCTCGAGCTGAAGCT
GAAGGCTGGTGGACGGCGCACCCTCATCGAGGGGACGTGGGGTGGGGAGCCCGTCAACATCCAGCTCACGCCAGAGAAGC
TCACCATGCGCTGGGGCCGCACCATGCGTGAGATGGCGCGACACCTGGACCCGCAGGTGGGCACCACGTGCAACCGCTAC
CAGCGCACCGAAGGCCCCCGGGTGCTGGACCAATTGGATGTCTGCGGCGCGGCGCTCGGCACCCGCCCACCCAACGCGCA
GCTCATCATCGCCCTCCTGGTGAATGGCTTCAGCCCCACGTTGCCTGCGGGGAGCATTCCCATTCCGCGGCCCCCCGTGC
GCAGCCGTCAAGCGCTCGACACGGAGCGGACCGCGCTCCCCCCGTCGCCCTGA

Upstream 100 bases:

>100_bases
CCTGGGGCACGGGTGAAGTCCCGCGCTATGAGGCCCGCACTGGCCTCCCCGAGGGTGCGCTGAGCGCGCGCCGCCCCGTG
TCGCTGTGAGGATTCCCGTC

Downstream 100 bases:

>100_bases
GCGCGGAGGGCCCGTGACCACGGGCCCCGGCGTGAAACGGGGACCTCCCGTCAGAAGGCGAAGTCGCGCTCCAGGGTTTC
GCTCCCCGCCTGCACGGACA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 390; Mature: 390

Protein sequence:

>390_residues
MDFRKKLAALLLALASTGAGAQPSEGAQKLPVGWYVTESAPKRYEAGVDSSATCEGNRSAYLRSLSPDENGYGTFMQAFG
AHDFRGKRLRFSGALRIKDVEGWAGLWMRVEGPDPKQPLAFDNMQSRALVGTAGCKRYDVVLDVPKEATTIMAGLIMSGT
GQAWLDGVRFEVVDTSVPVTDLLASRPVVAAAGPSGLEDEPAPVAKNDQLPLGRVGDVWFNHGRIAADKPYTRRKDGVWV
SILGEEVYEHGIAVTGTLGQRALELKLKAGGRRTLIEGTWGGEPVNIQLTPEKLTMRWGRTMREMARHLDPQVGTTCNRY
QRTEGPRVLDQLDVCGAALGTRPPNAQLIIALLVNGFSPTLPAGSIPIPRPPVRSRQALDTERTALPPSP

Sequences:

>Translated_390_residues
MDFRKKLAALLLALASTGAGAQPSEGAQKLPVGWYVTESAPKRYEAGVDSSATCEGNRSAYLRSLSPDENGYGTFMQAFG
AHDFRGKRLRFSGALRIKDVEGWAGLWMRVEGPDPKQPLAFDNMQSRALVGTAGCKRYDVVLDVPKEATTIMAGLIMSGT
GQAWLDGVRFEVVDTSVPVTDLLASRPVVAAAGPSGLEDEPAPVAKNDQLPLGRVGDVWFNHGRIAADKPYTRRKDGVWV
SILGEEVYEHGIAVTGTLGQRALELKLKAGGRRTLIEGTWGGEPVNIQLTPEKLTMRWGRTMREMARHLDPQVGTTCNRY
QRTEGPRVLDQLDVCGAALGTRPPNAQLIIALLVNGFSPTLPAGSIPIPRPPVRSRQALDTERTALPPSP
>Mature_390_residues
MDFRKKLAALLLALASTGAGAQPSEGAQKLPVGWYVTESAPKRYEAGVDSSATCEGNRSAYLRSLSPDENGYGTFMQAFG
AHDFRGKRLRFSGALRIKDVEGWAGLWMRVEGPDPKQPLAFDNMQSRALVGTAGCKRYDVVLDVPKEATTIMAGLIMSGT
GQAWLDGVRFEVVDTSVPVTDLLASRPVVAAAGPSGLEDEPAPVAKNDQLPLGRVGDVWFNHGRIAADKPYTRRKDGVWV
SILGEEVYEHGIAVTGTLGQRALELKLKAGGRRTLIEGTWGGEPVNIQLTPEKLTMRWGRTMREMARHLDPQVGTTCNRY
QRTEGPRVLDQLDVCGAALGTRPPNAQLIIALLVNGFSPTLPAGSIPIPRPPVRSRQALDTERTALPPSP

Specific function: Probable transcriptional regulator [H]

COG id: COG2207

COG function: function code K; AraC-type DNA-binding domain-containing proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR018060 [H]

Pfam domain/function: PF00165 HTH_AraC [H]

EC number: NA

Molecular weight: Translated: 42131; Mature: 42131

Theoretical pI: Translated: 9.10; Mature: 9.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDFRKKLAALLLALASTGAGAQPSEGAQKLPVGWYVTESAPKRYEAGVDSSATCEGNRSA
CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCHHHCCCCCCCCCCCCCCE
YLRSLSPDENGYGTFMQAFGAHDFRGKRLRFSGALRIKDVEGWAGLWMRVEGPDPKQPLA
EEEECCCCCCCHHHHHHHHCCCCCCCCEEEEECCEEEEECCCCEEEEEEECCCCCCCCCC
FDNMQSRALVGTAGCKRYDVVLDVPKEATTIMAGLIMSGTGQAWLDGVRFEVVDTSVPVT
CCCCCCCEEEECCCCCEEEEEEECCCHHHHHHHHHHHCCCCHHHHCCEEEEEEECCCCHH
DLLASRPVVAAAGPSGLEDEPAPVAKNDQLPLGRVGDVWFNHGRIAADKPYTRRKDGVWV
HHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCEEECCCCCCCCCCCEEE
SILGEEVYEHGIAVTGTLGQRALELKLKAGGRRTLIEGTWGGEPVNIQLTPEKLTMRWGR
EEECHHHHHCCCEEEECCCCEEEEEEEECCCCEEEEECCCCCCEEEEEECHHHHHHHHHH
TMREMARHLDPQVGTTCNRYQRTEGPRVLDQLDVCGAALGTRPPNAQLIIALLVNGFSPT
HHHHHHHHCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHCCCCCCHHEEEEEEECCCCCC
LPAGSIPIPRPPVRSRQALDTERTALPPSP
CCCCCCCCCCCCCCCCHHCCCCCCCCCCCC
>Mature Secondary Structure
MDFRKKLAALLLALASTGAGAQPSEGAQKLPVGWYVTESAPKRYEAGVDSSATCEGNRSA
CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCHHHCCCCCCCCCCCCCCE
YLRSLSPDENGYGTFMQAFGAHDFRGKRLRFSGALRIKDVEGWAGLWMRVEGPDPKQPLA
EEEECCCCCCCHHHHHHHHCCCCCCCCEEEEECCEEEEECCCCEEEEEEECCCCCCCCCC
FDNMQSRALVGTAGCKRYDVVLDVPKEATTIMAGLIMSGTGQAWLDGVRFEVVDTSVPVT
CCCCCCCEEEECCCCCEEEEEEECCCHHHHHHHHHHHCCCCHHHHCCEEEEEEECCCCHH
DLLASRPVVAAAGPSGLEDEPAPVAKNDQLPLGRVGDVWFNHGRIAADKPYTRRKDGVWV
HHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCEEECCCCCCCCCCCEEE
SILGEEVYEHGIAVTGTLGQRALELKLKAGGRRTLIEGTWGGEPVNIQLTPEKLTMRWGR
EEECHHHHHCCCEEEECCCCEEEEEEEECCCCEEEEECCCCCCEEEEEECHHHHHHHHHH
TMREMARHLDPQVGTTCNRYQRTEGPRVLDQLDVCGAALGTRPPNAQLIIALLVNGFSPT
HHHHHHHHCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHCCCCCCHHEEEEEEECCCCCC
LPAGSIPIPRPPVRSRQALDTERTALPPSP
CCCCCCCCCCCCCCCCHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]