| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108759304
Identifier: 108759304
GI number: 108759304
Start: 3015870
End: 3017858
Strand: Reverse
Name: 108759304
Synonym: MXAN_2593
Alternate gene names: NA
Gene position: 3017858-3015870 (Counterclockwise)
Preceding gene: 108763870
Following gene: 108759970
Centisome position: 33.02
GC content: 66.06
Gene sequence:
>1989_bases ATGCAGCCGGATTCCCGTCCGGCGATGGAAACACCGCCACCCTCGCCCCGTGGCGTGGCCTGGCTTGCGCCGCACTCGGC ATGCCACCATGGAATACGTCCTGCACTCGTTCACTTCATGACCTCCCAAACGTGTCTCACCGCCCTGCTTGGCTTCGGCG TCCTGACGGCCTGCATCAATGTCCCCGACGTCGTCGAGCCACCGGAACTCCCGGACAGCGGGACGCCCTATGTCAGGCTC CAACTCGCCGGGGGCGCGACCCACGTTCGCGACACTGTCACCGTCCACGTCAAAACCAACGGCGAGTCGACCGACGACGT CGAGCTCCTGCTCGATGGCGCATCCCTTGGGAACGTCACGGCCCCGACCGAATTCGCATGGGACACCTCGGAGCATACGG AAGGGCAACACTCCCTGACTGCCCGTGTCAGGCTCCAGAACGCAACGTGGCAGAGCGAGCCACTCGTCGTCACCATCGAC CGGACACCGCCTACCATCGCCCTGAGAGCGCCGGCCGACGGGGAAGCGGACGTCAGCGCATCCCACCCCATCCGGGTCGA GTTCTCCGAAGCGCTCCATCCAGACAGTCTCGCCGCATTGAGCGTCGAACTCCTCGTCAACGGTGAAAGCGTCGCCAGGA CACTGAGCCTCTCCGAATCCCAGCGGACCCTGGAGATTCAAGCAGGCGTCGAGCTTCCGCTGCCCCGAGATGTGGAGGTG AAGCTCACCGGTGTCCGGGACCTCGCGGGGAACCCAGTAGCAGCGCCTTTGGTGAGTTGGTCCTGGAACGTCCCTGCGTG GCTCCCGGTCGGTCCCCGCGATGGGCTCGTCATCGAAGAAGGTGCTGCGACCCTGTCACGGCTGGCGCTGAGGGAGCACG CTCCGCAAGCCGCGGTCGTTGCGTTCCAGGTCGACAACGGCGTGGGGGTACGTCGCTGGACGGGGCAAACGTGGGAGCGA CTGGGCACCGTCCTGAAGCCCACCAGCACCACCGCCGACCTCCACTTCAGCAACGACGGCGAACCGGTCGTTGCCTTCTC CCACTTTTTCAAACGAGAGGACGAAGAACTCAACCTTGTCGACGTGGCCGAAACGGCCATCCATCGCTGGGCGGGCGCCG AATGGGAACGTTTTGCACTGACCGCCAGTGACTGGGACACGGCGTGGCCTACGAACTGGCCCGTGCAGCGCGAAGCCCCC TCCTTCGCGTTCGACACGACGGGGACACCCTTTCTCGCGCACGCGACTGGCGCCTACTCGGGATTCGGCTGCCAGGGGGA TGTCCATCTCGCCGTCCAGACGCAGAGCGACGGAAACTGGCTTCAAGTCGACAGCCCGTCTCGCGGCGCTCCAGAACAGT GCGGAATCGTCTCCACCCCCACCCTGGCGTTGAACAGCTCGCGGCTCCCCGTCGTCGCCTGGGCTGAAGTCATGCACGCT GGAGGTACGCCGACCCAGGACGCGCGCATCTTCGTCAAGCAACGCACGGCCGTAGGCTGGAACGCGTTGGGCGGAGCCAT CAGGCACCACTCGGGTGGCACCTTCGCGTCTCAGCCTGTCTTGAAGGTATCGGCCGCTGACGTGCCCGTCCTCGCCTGGA AGGAATCCAATCCCAGCGGCTCTGGCACAACGGCGACGGACATTTTCGTGCGTCAGTGGGAAGACCGCCAGTGGAAGGCA CTGGGCGGCCCTCTCAGCGCAGCTCCCGGCAACACCCCCGCGGACAGCCCCGCGCTCGCATTGGACAGCGAGGGCACCCC GGTCATCGCCTGGATCGAAGAAGAGGGCACCGCCAGGCGCGTGCACGTCAGGACGTGGACCGGCGACGCCTGGCTGCCGT TCGGCACTGCGCCCAGTGCGATTCCGGAGTCCAACGGCGCCGCCACGGTATCGGTCCAGTTGGATACGGACGGCACCCCC TGGGTGGCATGGGATGCCAGCCCTGGCGGTGCCCCTCCACGAATCTTCGTCTACCGCTTCAACCGCTAG
Upstream 100 bases:
>100_bases CGCGTGTCTGTCGCGAAATCCAGACTGCCGTCACGCACCGTGCGTGTTCGCGAACCAGCGCGTGGCGCTCACGTCAGCGC TCATCGCGGGCTGAGGGTCC
Downstream 100 bases:
>100_bases CCAGCCCCACGCCGCCAGTCGCTACACTGGCGGCATGGCATCCTCTCCCCTCCCCTTCCTCCGCGGCCTGCGGCCCACGC TGCACATCGCCCACCGTGGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 662; Mature: 662
Protein sequence:
>662_residues MQPDSRPAMETPPPSPRGVAWLAPHSACHHGIRPALVHFMTSQTCLTALLGFGVLTACINVPDVVEPPELPDSGTPYVRL QLAGGATHVRDTVTVHVKTNGESTDDVELLLDGASLGNVTAPTEFAWDTSEHTEGQHSLTARVRLQNATWQSEPLVVTID RTPPTIALRAPADGEADVSASHPIRVEFSEALHPDSLAALSVELLVNGESVARTLSLSESQRTLEIQAGVELPLPRDVEV KLTGVRDLAGNPVAAPLVSWSWNVPAWLPVGPRDGLVIEEGAATLSRLALREHAPQAAVVAFQVDNGVGVRRWTGQTWER LGTVLKPTSTTADLHFSNDGEPVVAFSHFFKREDEELNLVDVAETAIHRWAGAEWERFALTASDWDTAWPTNWPVQREAP SFAFDTTGTPFLAHATGAYSGFGCQGDVHLAVQTQSDGNWLQVDSPSRGAPEQCGIVSTPTLALNSSRLPVVAWAEVMHA GGTPTQDARIFVKQRTAVGWNALGGAIRHHSGGTFASQPVLKVSAADVPVLAWKESNPSGSGTTATDIFVRQWEDRQWKA LGGPLSAAPGNTPADSPALALDSEGTPVIAWIEEEGTARRVHVRTWTGDAWLPFGTAPSAIPESNGAATVSVQLDTDGTP WVAWDASPGGAPPRIFVYRFNR
Sequences:
>Translated_662_residues MQPDSRPAMETPPPSPRGVAWLAPHSACHHGIRPALVHFMTSQTCLTALLGFGVLTACINVPDVVEPPELPDSGTPYVRL QLAGGATHVRDTVTVHVKTNGESTDDVELLLDGASLGNVTAPTEFAWDTSEHTEGQHSLTARVRLQNATWQSEPLVVTID RTPPTIALRAPADGEADVSASHPIRVEFSEALHPDSLAALSVELLVNGESVARTLSLSESQRTLEIQAGVELPLPRDVEV KLTGVRDLAGNPVAAPLVSWSWNVPAWLPVGPRDGLVIEEGAATLSRLALREHAPQAAVVAFQVDNGVGVRRWTGQTWER LGTVLKPTSTTADLHFSNDGEPVVAFSHFFKREDEELNLVDVAETAIHRWAGAEWERFALTASDWDTAWPTNWPVQREAP SFAFDTTGTPFLAHATGAYSGFGCQGDVHLAVQTQSDGNWLQVDSPSRGAPEQCGIVSTPTLALNSSRLPVVAWAEVMHA GGTPTQDARIFVKQRTAVGWNALGGAIRHHSGGTFASQPVLKVSAADVPVLAWKESNPSGSGTTATDIFVRQWEDRQWKA LGGPLSAAPGNTPADSPALALDSEGTPVIAWIEEEGTARRVHVRTWTGDAWLPFGTAPSAIPESNGAATVSVQLDTDGTP WVAWDASPGGAPPRIFVYRFNR >Mature_662_residues MQPDSRPAMETPPPSPRGVAWLAPHSACHHGIRPALVHFMTSQTCLTALLGFGVLTACINVPDVVEPPELPDSGTPYVRL QLAGGATHVRDTVTVHVKTNGESTDDVELLLDGASLGNVTAPTEFAWDTSEHTEGQHSLTARVRLQNATWQSEPLVVTID RTPPTIALRAPADGEADVSASHPIRVEFSEALHPDSLAALSVELLVNGESVARTLSLSESQRTLEIQAGVELPLPRDVEV KLTGVRDLAGNPVAAPLVSWSWNVPAWLPVGPRDGLVIEEGAATLSRLALREHAPQAAVVAFQVDNGVGVRRWTGQTWER LGTVLKPTSTTADLHFSNDGEPVVAFSHFFKREDEELNLVDVAETAIHRWAGAEWERFALTASDWDTAWPTNWPVQREAP SFAFDTTGTPFLAHATGAYSGFGCQGDVHLAVQTQSDGNWLQVDSPSRGAPEQCGIVSTPTLALNSSRLPVVAWAEVMHA GGTPTQDARIFVKQRTAVGWNALGGAIRHHSGGTFASQPVLKVSAADVPVLAWKESNPSGSGTTATDIFVRQWEDRQWKA LGGPLSAAPGNTPADSPALALDSEGTPVIAWIEEEGTARRVHVRTWTGDAWLPFGTAPSAIPESNGAATVSVQLDTDGTP WVAWDASPGGAPPRIFVYRFNR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 70791; Mature: 70791
Theoretical pI: Translated: 4.81; Mature: 4.81
Prosite motif: PS00307 LECTIN_LEGUME_BETA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQPDSRPAMETPPPSPRGVAWLAPHSACHHGIRPALVHFMTSQTCLTALLGFGVLTACIN CCCCCCCCCCCCCCCCCCEEEECCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC VPDVVEPPELPDSGTPYVRLQLAGGATHVRDTVTVHVKTNGESTDDVELLLDGASLGNVT CCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEEEEEEEECCCCCCCEEEEEECCCCCCCC APTEFAWDTSEHTEGQHSLTARVRLQNATWQSEPLVVTIDRTPPTIALRAPADGEADVSA CCCCEECCCCCCCCCCCEEEEEEEEECCCCCCCCEEEEECCCCCEEEEECCCCCCCCCCC SHPIRVEFSEALHPDSLAALSVELLVNGESVARTLSLSESQRTLEIQAGVELPLPRDVEV CCCEEEEHHHCCCCCCCEEEEEEEEECCHHHEEEEECCCCCEEEEEECCCCCCCCCCCEE KLTGVRDLAGNPVAAPLVSWSWNVPAWLPVGPRDGLVIEEGAATLSRLALREHAPQAAVV EEEEEHHCCCCCCCCCEEEECCCCCEEEECCCCCCEEEECCHHHHHHHHHHHCCCCEEEE AFQVDNGVGVRRWTGQTWERLGTVLKPTSTTADLHFSNDGEPVVAFSHFFKREDEELNLV EEEECCCCEEEEECCHHHHHHCCEECCCCCEEEEEECCCCCEEEEEHHHHCCCCCCCCEE DVAETAIHRWAGAEWERFALTASDWDTAWPTNWPVQREAPSFAFDTTGTPFLAHATGAYS HHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCEEECCCCCCEEEECCCCCC GFGCQGDVHLAVQTQSDGNWLQVDSPSRGAPEQCGIVSTPTLALNSSRLPVVAWAEVMHA CCCCCCEEEEEEEECCCCCEEEECCCCCCCCHHCCEEECCEEEECCCCCCEEEHHHHHHC GGTPTQDARIFVKQRTAVGWNALGGAIRHHSGGTFASQPVLKVSAADVPVLAWKESNPSG CCCCCCCCEEEEEEECCCCHHHHCCCEEECCCCCCCCCCEEEEECCCCEEEEEECCCCCC SGTTATDIFVRQWEDRQWKALGGPLSAAPGNTPADSPALALDSEGTPVIAWIEEEGTARR CCCCCEEEEEEECCCCCEECCCCCCCCCCCCCCCCCCEEEECCCCCEEEEEEECCCCEEE VHVRTWTGDAWLPFGTAPSAIPESNGAATVSVQLDTDGTPWVAWDASPGGAPPRIFVYRF EEEEEECCCEEEECCCCCCCCCCCCCCEEEEEEECCCCCCEEEEECCCCCCCCEEEEEEE NR CC >Mature Secondary Structure MQPDSRPAMETPPPSPRGVAWLAPHSACHHGIRPALVHFMTSQTCLTALLGFGVLTACIN CCCCCCCCCCCCCCCCCCEEEECCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC VPDVVEPPELPDSGTPYVRLQLAGGATHVRDTVTVHVKTNGESTDDVELLLDGASLGNVT CCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEEEEEEEECCCCCCCEEEEEECCCCCCCC APTEFAWDTSEHTEGQHSLTARVRLQNATWQSEPLVVTIDRTPPTIALRAPADGEADVSA CCCCEECCCCCCCCCCCEEEEEEEEECCCCCCCCEEEEECCCCCEEEEECCCCCCCCCCC SHPIRVEFSEALHPDSLAALSVELLVNGESVARTLSLSESQRTLEIQAGVELPLPRDVEV CCCEEEEHHHCCCCCCCEEEEEEEEECCHHHEEEEECCCCCEEEEEECCCCCCCCCCCEE KLTGVRDLAGNPVAAPLVSWSWNVPAWLPVGPRDGLVIEEGAATLSRLALREHAPQAAVV EEEEEHHCCCCCCCCCEEEECCCCCEEEECCCCCCEEEECCHHHHHHHHHHHCCCCEEEE AFQVDNGVGVRRWTGQTWERLGTVLKPTSTTADLHFSNDGEPVVAFSHFFKREDEELNLV EEEECCCCEEEEECCHHHHHHCCEECCCCCEEEEEECCCCCEEEEEHHHHCCCCCCCCEE DVAETAIHRWAGAEWERFALTASDWDTAWPTNWPVQREAPSFAFDTTGTPFLAHATGAYS HHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCEEECCCCCCEEEECCCCCC GFGCQGDVHLAVQTQSDGNWLQVDSPSRGAPEQCGIVSTPTLALNSSRLPVVAWAEVMHA CCCCCCEEEEEEEECCCCCEEEECCCCCCCCHHCCEEECCEEEECCCCCCEEEHHHHHHC GGTPTQDARIFVKQRTAVGWNALGGAIRHHSGGTFASQPVLKVSAADVPVLAWKESNPSG CCCCCCCCEEEEEEECCCCHHHHCCCEEECCCCCCCCCCEEEEECCCCEEEEEECCCCCC SGTTATDIFVRQWEDRQWKALGGPLSAAPGNTPADSPALALDSEGTPVIAWIEEEGTARR CCCCCEEEEEEECCCCCEECCCCCCCCCCCCCCCCCCEEEECCCCCEEEEEEECCCCEEE VHVRTWTGDAWLPFGTAPSAIPESNGAATVSVQLDTDGTPWVAWDASPGGAPPRIFVYRF EEEEEECCCEEEECCCCCCCCCCCCCCEEEEEEECCCCCCEEEEECCCCCCCCEEEEEEE NR CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA