| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108759282
Identifier: 108759282
GI number: 108759282
Start: 4834386
End: 4836092
Strand: Reverse
Name: 108759282
Synonym: MXAN_3971
Alternate gene names: NA
Gene position: 4836092-4834386 (Counterclockwise)
Preceding gene: 108760115
Following gene: 108762443
Centisome position: 52.91
GC content: 69.6
Gene sequence:
>1707_bases ATGCCCTGGTCCTTCCGGCAGATGCTGGCGCCGCTGTCCGCACTGCTCCTTTTCATGTCCGCATGTGGCGACGACCCTGA AGTCAGGCCCGTTTGCGGAAATGGCATCGTCGAGGCTGGCGAGACGTGCGACGACGGCAACCGAAACAACAACGACAGCT GTGACAACAGCTGCCGTCGTCCCACGCCGGACGCGGGCACCGAGGAGGATGCCGGCACCGAGGACGACGCCGGCACCGGT GAAGTGGACGCTGGCACCGGTGAAGAGGATGCGGGCACCGGTGAGGACGACGCCGGCACCACCGAGGACGCTGGCACCGG TGAGGACGACGCTGGCACCACCGAGGACGCGGGCACCGGTGAGGACGACGCTGGCACCACCGAGGATGGTGGTTCAGGCG AGCAGGACGCGGGTTCGGATGAAGACGGTGGTTCGGGTGAGCCGGATTCCGGCACCGACGCGGGCACGGGCGAGGACGAC GCCGGCACCGACGCGGGCACGGTCCAGGTCTCGCTGGACAGCTTCGGTCCGACGGGCACCTTCGCGCGCACTGGCACCAC GGGGGCGACGTTCCCCGAGGCGCTGACGGTGCGTCTGCGTGAGGAAGCTCCGGCGGAGGTCTGGGTGGAGGTTACTTCGT CCAGCGCCGTGCTGAACGTGCAGGGTGGTCTGGTGCGCATCGCCCCGGGTGAGCGCTCCGCCACGGTGCAGGTGACGGCG AACCTGGCCGCGGATCCGGAGACGGACAAGGCGACGCTGACGGCCACGCTGGGCAACGACACGCGTGCGGCCACGGTCCG GGTGCTGGCGGCGAATCAGGCCGCTGAGCTGGCCACGCTGTCGCCCGAGGTCATCTCGGTGAGCGCTGGCCAGACGCAGG GCTACACGGTGGAGCTGGACGTTCCCCCGGCGCAGGACACGGTCATCCAGCTCGCGCTGGAGCCCGCGTCGCTCGGCACG GTGCCGGTGACGGTGACGGTGCCGGCCAACAGCCTGTCCGCCAAGTTCGACTTCACCGCGGGCAGCACGGGCGGTGAGGG TCAGCTGGTGGCCGCGCTGAACGGTCAGTCCATCGCGGCGGCGGTGCAGGTGACCGCGGGCAGCAGCACGGGCCACGTCG TCATCAGCGAGTTCGCGGTCGCGGGCCCCGGTGGCGCCAGCGACGAGTTCATCGAGCTCTACAACCCGACCTCGAGCGCG GTGGACATCTCCGGCTGGAAGGTCCAGTACAAGGCCTACAGCAGCACGAACTACAACAACTCGTTCACGCTGCCCGCGAA CTCGGTCATCCAGCCCCGTGGCTACTTCCTGGTGGTCGCCAGTGGTTATGCCTCGACGAGCGGCAACACCGTGTCGGGTG ACGCGAACTGGGGAACGGCCCTGAACCTGGCCGCCAACAGCAATGGTGGCCATGTGCGCGTCGGCTATCCGGAGCTGGCG CTGACCGACGGCATCTCCTCGCCGCTGGTGGTGGATACGGTGGGCTACCTCAACGCGAACGCCGCTGAGGGCAGCCCCTT GCCGGCGTACCCGCCCACCGCCGGCAGCTTCGAGCGCAAGGCCTCGGCCGTGTCGACCGCGGCGTCCATGGTCGACGGCG CGGACGCGCTGCTGGGCAACGGCCACGACTCGAACGACAACTCGGCGGACTTCATCCTCCGTCCGACGCGCCAGCCGCAG AACCGCGCGAGCGCCACGGAGCCGTAG
Upstream 100 bases:
>100_bases TTGAGTCCAGTGAAATCGGAAACTGCCGCCCGGATTGCGTCGTGGGTGACAGATATGGGATGCAGGGGGCTCTTCAAGTT TCAACGGAGACTCTTTACCC
Downstream 100 bases:
>100_bases CCAGCTGCCTGTTCGCCCCTACCGCCTGTGTGTGCGGTAGGGGCTGGTAATGCCGCACGGGGCGGGCCATAAGCCTTCCC CGTGCGAGTCGTTTCGTGGA
Product: putative lipoprotein
Products: NA
Alternate protein names: Ig-Like Domain-Containing Protein; Ig Domain Domain Protein; Lipoprotein
Number of amino acids: Translated: 568; Mature: 567
Protein sequence:
>568_residues MPWSFRQMLAPLSALLLFMSACGDDPEVRPVCGNGIVEAGETCDDGNRNNNDSCDNSCRRPTPDAGTEEDAGTEDDAGTG EVDAGTGEEDAGTGEDDAGTTEDAGTGEDDAGTTEDAGTGEDDAGTTEDGGSGEQDAGSDEDGGSGEPDSGTDAGTGEDD AGTDAGTVQVSLDSFGPTGTFARTGTTGATFPEALTVRLREEAPAEVWVEVTSSSAVLNVQGGLVRIAPGERSATVQVTA NLAADPETDKATLTATLGNDTRAATVRVLAANQAAELATLSPEVISVSAGQTQGYTVELDVPPAQDTVIQLALEPASLGT VPVTVTVPANSLSAKFDFTAGSTGGEGQLVAALNGQSIAAAVQVTAGSSTGHVVISEFAVAGPGGASDEFIELYNPTSSA VDISGWKVQYKAYSSTNYNNSFTLPANSVIQPRGYFLVVASGYASTSGNTVSGDANWGTALNLAANSNGGHVRVGYPELA LTDGISSPLVVDTVGYLNANAAEGSPLPAYPPTAGSFERKASAVSTAASMVDGADALLGNGHDSNDNSADFILRPTRQPQ NRASATEP
Sequences:
>Translated_568_residues MPWSFRQMLAPLSALLLFMSACGDDPEVRPVCGNGIVEAGETCDDGNRNNNDSCDNSCRRPTPDAGTEEDAGTEDDAGTG EVDAGTGEEDAGTGEDDAGTTEDAGTGEDDAGTTEDAGTGEDDAGTTEDGGSGEQDAGSDEDGGSGEPDSGTDAGTGEDD AGTDAGTVQVSLDSFGPTGTFARTGTTGATFPEALTVRLREEAPAEVWVEVTSSSAVLNVQGGLVRIAPGERSATVQVTA NLAADPETDKATLTATLGNDTRAATVRVLAANQAAELATLSPEVISVSAGQTQGYTVELDVPPAQDTVIQLALEPASLGT VPVTVTVPANSLSAKFDFTAGSTGGEGQLVAALNGQSIAAAVQVTAGSSTGHVVISEFAVAGPGGASDEFIELYNPTSSA VDISGWKVQYKAYSSTNYNNSFTLPANSVIQPRGYFLVVASGYASTSGNTVSGDANWGTALNLAANSNGGHVRVGYPELA LTDGISSPLVVDTVGYLNANAAEGSPLPAYPPTAGSFERKASAVSTAASMVDGADALLGNGHDSNDNSADFILRPTRQPQ NRASATEP >Mature_567_residues PWSFRQMLAPLSALLLFMSACGDDPEVRPVCGNGIVEAGETCDDGNRNNNDSCDNSCRRPTPDAGTEEDAGTEDDAGTGE VDAGTGEEDAGTGEDDAGTTEDAGTGEDDAGTTEDAGTGEDDAGTTEDGGSGEQDAGSDEDGGSGEPDSGTDAGTGEDDA GTDAGTVQVSLDSFGPTGTFARTGTTGATFPEALTVRLREEAPAEVWVEVTSSSAVLNVQGGLVRIAPGERSATVQVTAN LAADPETDKATLTATLGNDTRAATVRVLAANQAAELATLSPEVISVSAGQTQGYTVELDVPPAQDTVIQLALEPASLGTV PVTVTVPANSLSAKFDFTAGSTGGEGQLVAALNGQSIAAAVQVTAGSSTGHVVISEFAVAGPGGASDEFIELYNPTSSAV DISGWKVQYKAYSSTNYNNSFTLPANSVIQPRGYFLVVASGYASTSGNTVSGDANWGTALNLAANSNGGHVRVGYPELAL TDGISSPLVVDTVGYLNANAAEGSPLPAYPPTAGSFERKASAVSTAASMVDGADALLGNGHDSNDNSADFILRPTRQPQN RASATEP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 57187; Mature: 57056
Theoretical pI: Translated: 3.65; Mature: 3.65
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPWSFRQMLAPLSALLLFMSACGDDPEVRPVCGNGIVEAGETCDDGNRNNNDSCDNSCRR CCCCHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCEECCCCCCCCCCCCCCCCCCCCCC PTPDAGTEEDAGTEDDAGTGEVDAGTGEEDAGTGEDDAGTTEDAGTGEDDAGTTEDAGTG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC EDDAGTTEDGGSGEQDAGSDEDGGSGEPDSGTDAGTGEDDAGTDAGTVQVSLDSFGPTGT CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCC FARTGTTGATFPEALTVRLREEAPAEVWVEVTSSSAVLNVQGGLVRIAPGERSATVQVTA EEECCCCCCCCCCEEEEEECCCCCCEEEEEEECCCEEEEECCCEEEECCCCCCEEEEEEE NLAADPETDKATLTATLGNDTRAATVRVLAANQAAELATLSPEVISVSAGQTQGYTVELD EECCCCCCCCEEEEEEECCCCCEEEEEEEECCCCHHHEECCCCEEEEECCCCCCEEEEEE VPPAQDTVIQLALEPASLGTVPVTVTVPANSLSAKFDFTAGSTGGEGQLVAALNGQSIAA CCCCCCEEEEEEECCCCCCCEEEEEEECCCCCCEEEEEECCCCCCCCEEEEEECCCEEEE AVQVTAGSSTGHVVISEFAVAGPGGASDEFIELYNPTSSAVDISGWKVQYKAYSSTNYNN EEEEEECCCCCCEEEEEEEECCCCCCCCCEEEEECCCCCEEECCCEEEEEEEECCCCCCC SFTLPANSVIQPRGYFLVVASGYASTSGNTVSGDANWGTALNLAANSNGGHVRVGYPELA EEECCCCCEECCCCEEEEEECCCCCCCCCEEECCCCCCEEEEEEECCCCCEEEECCCCEE LTDGISSPLVVDTVGYLNANAAEGSPLPAYPPTAGSFERKASAVSTAASMVDGADALLGN EECCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHCCC GHDSNDNSADFILRPTRQPQNRASATEP CCCCCCCCCEEEEECCCCCCCCCCCCCC >Mature Secondary Structure PWSFRQMLAPLSALLLFMSACGDDPEVRPVCGNGIVEAGETCDDGNRNNNDSCDNSCRR CCCHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCEECCCCCCCCCCCCCCCCCCCCCC PTPDAGTEEDAGTEDDAGTGEVDAGTGEEDAGTGEDDAGTTEDAGTGEDDAGTTEDAGTG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC EDDAGTTEDGGSGEQDAGSDEDGGSGEPDSGTDAGTGEDDAGTDAGTVQVSLDSFGPTGT CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCC FARTGTTGATFPEALTVRLREEAPAEVWVEVTSSSAVLNVQGGLVRIAPGERSATVQVTA EEECCCCCCCCCCEEEEEECCCCCCEEEEEEECCCEEEEECCCEEEECCCCCCEEEEEEE NLAADPETDKATLTATLGNDTRAATVRVLAANQAAELATLSPEVISVSAGQTQGYTVELD EECCCCCCCCEEEEEEECCCCCEEEEEEEECCCCHHHEECCCCEEEEECCCCCCEEEEEE VPPAQDTVIQLALEPASLGTVPVTVTVPANSLSAKFDFTAGSTGGEGQLVAALNGQSIAA CCCCCCEEEEEEECCCCCCCEEEEEEECCCCCCEEEEEECCCCCCCCEEEEEECCCEEEE AVQVTAGSSTGHVVISEFAVAGPGGASDEFIELYNPTSSAVDISGWKVQYKAYSSTNYNN EEEEEECCCCCCEEEEEEEECCCCCCCCCEEEEECCCCCEEECCCEEEEEEEECCCCCCC SFTLPANSVIQPRGYFLVVASGYASTSGNTVSGDANWGTALNLAANSNGGHVRVGYPELA EEECCCCCEECCCCEEEEEECCCCCCCCCEEECCCCCCEEEEEEECCCCCEEEECCCCEE LTDGISSPLVVDTVGYLNANAAEGSPLPAYPPTAGSFERKASAVSTAASMVDGADALLGN EECCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHCCC GHDSNDNSADFILRPTRQPQNRASATEP CCCCCCCCCEEEEECCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA