| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is yxaH [H]
Identifier: 108759218
GI number: 108759218
Start: 3686940
End: 3688268
Strand: Reverse
Name: yxaH [H]
Synonym: MXAN_3147
Alternate gene names: 108759218
Gene position: 3688268-3686940 (Counterclockwise)
Preceding gene: 108758880
Following gene: 108761909
Centisome position: 40.35
GC content: 68.25
Gene sequence:
>1329_bases ATGCCCACCGCCCCTTCCTCCGATGCCTCCGCACCGCGCTCCGAAGCCCGTCCGGTCGAGGCAGGTGAGCGCCTGGAGCT GCTCGACGCGCTGCGTGGCTTCGCGCTCTTCGGCATTCTCATCTCCAACGTGCAGATGTGGTTCAGCGGCAGGGTGTTCC CGTCCCGGGAACAATTCGAGGCGTCCATCGCCAGTGCCTCGCTCCTGGACACCATCACCCGGTATGCCTTCGAGGTGCTG GTCTCCGGGAAGTTCATCACCCTCTTCGCCTTCCTCTTCGGCCTGGGTTTCGCGGTGCAGCTCGGCCGGGTCGAGGCGCG AGGTGGCGGCTTCGTCCCGCTCTACGTGAGGCGGCTGACAGTCTTGCTGGTGGTGGGGGTCCTGCACCTGTTCCTGCTCT GGTACGGCGACATCCTCTCCTCCTATGCGCTGATGGGCTTCTGCCTGCTGCTCCTGCGTCGGCGTTCTGAGCGAACGCTG CTCATCATCGCGGCGGTGCTCGTCCTGGTGTGGCCGCTGCTCATGAGCCTCCTCTGGCGGCTGCCGCAACTCCTGGCGGA CTCACCCGAGGCCGGTGCCGCGGTCATGGCCGCGGCCCGCGAGAAGACCTCCGCCATCCACGCGCGGATGCTGACGGCCA TCACCGGGGGAAGCTGGTGGGACGTGACAAAGACGAGCGCCGGGTTCTACCGCGATGAGTTCTTCACGATGATGCTGGCC GGACTGCTGACCTGTCTGGGCCGCTTCGCGCTCGGGCTCTGGGCGGGACGGCGCGGCATCTTCCAGGACGTCCCCTCGCA CCTGGGTTTCTTTCGCCGCCTGCTCGGCTGGGGGCTGGTGGCCGCGGTGGTGGGCTCCGTGCCCGGCGTGGTGGTGACGG TGCTCATGCAGAAGAAGGTGCTCACGCCGGAGACGATGCCCGTGTGGCTGCCCCTGGTGCTGGCGCCGCTGCGCAACCTG GCACAGGTGGGGCTCGCCGGCGTGTATCTGGCGGGCATCACCCTGCTCTTCCAGCGCGCCACCTGGCAGCGGGCGCTGGG ACTGCTCGCGCCCGCGGGACGCATGGCGCTGACGAACTACCTGTCGCAGACGGTCATCAGCCTGCTCATCTTCTACGGCT ATGGCCTGGGACAGGTGGGCAAGCGGGGCCCCTTCGCTTGTGTCGTCATCTGCGTGGGCGTCTTCTGCGTCCAGGTGCTG TGGAGCCACCTGTGGCTGTCACGCTTCCGCTTCGGTCCGGTGGAGTGGGCGTGGCGCTCTTTGACGTACGGGAAGGCTCA GGCCATGCGGCGCGCCGCGTCCGACACGCCCGCCCCCCTGACGGCGTGA
Upstream 100 bases:
>100_bases ATGAATGTCTTTTCGCGTACGCTCCTGGGACGCGAAAAGACGCGCATCAAAAGCGGAGGAATTCGCAATCGAGGTGGCTG TATGACGTTGTTCAACCATC
Downstream 100 bases:
>100_bases CGGGTTCGACCTGGCGACGTCAATTCGTGACCGCCGGGTGAGGAGCGGCAACGCGCACCCGGAAACCGAAGCCAATCCAA AGATGGAAGGCGCGCTCGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 442; Mature: 441
Protein sequence:
>442_residues MPTAPSSDASAPRSEARPVEAGERLELLDALRGFALFGILISNVQMWFSGRVFPSREQFEASIASASLLDTITRYAFEVL VSGKFITLFAFLFGLGFAVQLGRVEARGGGFVPLYVRRLTVLLVVGVLHLFLLWYGDILSSYALMGFCLLLLRRRSERTL LIIAAVLVLVWPLLMSLLWRLPQLLADSPEAGAAVMAAAREKTSAIHARMLTAITGGSWWDVTKTSAGFYRDEFFTMMLA GLLTCLGRFALGLWAGRRGIFQDVPSHLGFFRRLLGWGLVAAVVGSVPGVVVTVLMQKKVLTPETMPVWLPLVLAPLRNL AQVGLAGVYLAGITLLFQRATWQRALGLLAPAGRMALTNYLSQTVISLLIFYGYGLGQVGKRGPFACVVICVGVFCVQVL WSHLWLSRFRFGPVEWAWRSLTYGKAQAMRRAASDTPAPLTA
Sequences:
>Translated_442_residues MPTAPSSDASAPRSEARPVEAGERLELLDALRGFALFGILISNVQMWFSGRVFPSREQFEASIASASLLDTITRYAFEVL VSGKFITLFAFLFGLGFAVQLGRVEARGGGFVPLYVRRLTVLLVVGVLHLFLLWYGDILSSYALMGFCLLLLRRRSERTL LIIAAVLVLVWPLLMSLLWRLPQLLADSPEAGAAVMAAAREKTSAIHARMLTAITGGSWWDVTKTSAGFYRDEFFTMMLA GLLTCLGRFALGLWAGRRGIFQDVPSHLGFFRRLLGWGLVAAVVGSVPGVVVTVLMQKKVLTPETMPVWLPLVLAPLRNL AQVGLAGVYLAGITLLFQRATWQRALGLLAPAGRMALTNYLSQTVISLLIFYGYGLGQVGKRGPFACVVICVGVFCVQVL WSHLWLSRFRFGPVEWAWRSLTYGKAQAMRRAASDTPAPLTA >Mature_441_residues PTAPSSDASAPRSEARPVEAGERLELLDALRGFALFGILISNVQMWFSGRVFPSREQFEASIASASLLDTITRYAFEVLV SGKFITLFAFLFGLGFAVQLGRVEARGGGFVPLYVRRLTVLLVVGVLHLFLLWYGDILSSYALMGFCLLLLRRRSERTLL IIAAVLVLVWPLLMSLLWRLPQLLADSPEAGAAVMAAAREKTSAIHARMLTAITGGSWWDVTKTSAGFYRDEFFTMMLAG LLTCLGRFALGLWAGRRGIFQDVPSHLGFFRRLLGWGLVAAVVGSVPGVVVTVLMQKKVLTPETMPVWLPLVLAPLRNLA QVGLAGVYLAGITLLFQRATWQRALGLLAPAGRMALTNYLSQTVISLLIFYGYGLGQVGKRGPFACVVICVGVFCVQVLW SHLWLSRFRFGPVEWAWRSLTYGKAQAMRRAASDTPAPLTA
Specific function: Involved in transport (Potential) [H]
COG id: COG2311
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007349 [H]
Pfam domain/function: PF04235 DUF418 [H]
EC number: NA
Molecular weight: Translated: 48463; Mature: 48332
Theoretical pI: Translated: 10.75; Mature: 10.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTAPSSDASAPRSEARPVEAGERLELLDALRGFALFGILISNVQMWFSGRVFPSREQFE CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH ASIASASLLDTITRYAFEVLVSGKFITLFAFLFGLGFAVQLGRVEARGGGFVPLYVRRLT HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCEECCCCCCHHHHHHHHH VLLVVGVLHLFLLWYGDILSSYALMGFCLLLLRRRSERTLLIIAAVLVLVWPLLMSLLWR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH LPQLLADSPEAGAAVMAAAREKTSAIHARMLTAITGGSWWDVTKTSAGFYRDEFFTMMLA HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHH GLLTCLGRFALGLWAGRRGIFQDVPSHLGFFRRLLGWGLVAAVVGSVPGVVVTVLMQKKV HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHC LTPETMPVWLPLVLAPLRNLAQVGLAGVYLAGITLLFQRATWQRALGLLAPAGRMALTNY CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH LSQTVISLLIFYGYGLGQVGKRGPFACVVICVGVFCVQVLWSHLWLSRFRFGPVEWAWRS HHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH LTYGKAQAMRRAASDTPAPLTA HHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure PTAPSSDASAPRSEARPVEAGERLELLDALRGFALFGILISNVQMWFSGRVFPSREQFE CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH ASIASASLLDTITRYAFEVLVSGKFITLFAFLFGLGFAVQLGRVEARGGGFVPLYVRRLT HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCEECCCCCCHHHHHHHHH VLLVVGVLHLFLLWYGDILSSYALMGFCLLLLRRRSERTLLIIAAVLVLVWPLLMSLLWR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH LPQLLADSPEAGAAVMAAAREKTSAIHARMLTAITGGSWWDVTKTSAGFYRDEFFTMMLA HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHH GLLTCLGRFALGLWAGRRGIFQDVPSHLGFFRRLLGWGLVAAVVGSVPGVVVTVLMQKKV HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHC LTPETMPVWLPLVLAPLRNLAQVGLAGVYLAGITLLFQRATWQRALGLLAPAGRMALTNY CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH LSQTVISLLIFYGYGLGQVGKRGPFACVVICVGVFCVQVLWSHLWLSRFRFGPVEWAWRS HHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH LTYGKAQAMRRAASDTPAPLTA HHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7584049; 9384377 [H]