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The map label for this gene is pilA [H]

Identifier: 108759080

GI number: 108759080

Start: 7037825

End: 7038565

Strand: Reverse

Name: pilA [H]

Synonym: MXAN_5675

Alternate gene names: 108759080

Gene position: 7038565-7037825 (Counterclockwise)

Preceding gene: 108762746

Following gene: 108762181

Centisome position: 77.01

GC content: 68.02

Gene sequence:

>741_bases
TTGCCGGCCCTCGTGCGCGGCTCGCACATGTGCCAAGGGGCCCTGTCCATGGCGGCGAACCTGGAGTGCCCGAAGTGCGG
CAGCGAGCTCGACGTGACGGGGCGGGGCCCGGGCGCCATCATTCGCTGTGCCTGCGGGAACCTGTCAGCCGTCCCGAAGC
GCTCCTATTGGGCGAGCCCGCGCGGCGTGGCGCTGGCCCTGGGGGTGTTCTTGCTCTGCCCCTGTGTGGGCATCCTGGCC
GCCATCGCCATCCCCAACTACAACAAGCTTCCGGTGCGCTCCAAGCAGCAGGAGTGCAAGGCGAACCTCCGTGGCCTCTA
CGCCGCCCAACGCAACCACAACGCCGAGCACGGCACCTTCGAGCCGCGCATCGTGAATGCGGGCTTCATCCCGGAGCGAG
GCAACCGCTACGCGTACTTCACGGGCACGGGGCCGCTGGTGACGCGCGACGCGGAAGGGGATGCGGTTCCGGCGGACGCC
GGTGGTATTGGCGTGGACCGCTCTCGGGACGCGAGCCGCCGAGCCATTACCCTGGCGGACCTTCCTGCTTGGGTGTCCCG
GCAGGTGGGCGTCTTTGGCACGTGCCCGGACTGCTACGTCACCATGGGCTGCGCGGGGAACATCGACATCGATGACACAG
TGGACGTCTGGCTCATCTCCACGAAGCCGCTCAAGGATGAGTACGGCGAGGCCGTTCCTCCTGGCACCCCGACGAATGTC
GTGAACGACGTCGACGGTTGA

Upstream 100 bases:

>100_bases
GGGTTTCAACACGGGCGCAGTCTAGCTGTCCGGCCGGGGAGCGCGTCCATCGGCATGCCTGCCGCCCCTGGCCGGAGAGC
GGCCCCAGGGGCATGGTAGG

Downstream 100 bases:

>100_bases
CGGGCCCGGTCCGCCGGGAGCCGTCGCTTCGCCCGGCGAAATCGCCATGGGCGGACGACCCGGAAATCCCGCGCTTTTCG
TATCTGACTTTGAGAGCGAC

Product: putative fimbrial protein

Products: NA

Alternate protein names: Pilin [H]

Number of amino acids: Translated: 246; Mature: 245

Protein sequence:

>246_residues
MPALVRGSHMCQGALSMAANLECPKCGSELDVTGRGPGAIIRCACGNLSAVPKRSYWASPRGVALALGVFLLCPCVGILA
AIAIPNYNKLPVRSKQQECKANLRGLYAAQRNHNAEHGTFEPRIVNAGFIPERGNRYAYFTGTGPLVTRDAEGDAVPADA
GGIGVDRSRDASRRAITLADLPAWVSRQVGVFGTCPDCYVTMGCAGNIDIDDTVDVWLISTKPLKDEYGEAVPPGTPTNV
VNDVDG

Sequences:

>Translated_246_residues
MPALVRGSHMCQGALSMAANLECPKCGSELDVTGRGPGAIIRCACGNLSAVPKRSYWASPRGVALALGVFLLCPCVGILA
AIAIPNYNKLPVRSKQQECKANLRGLYAAQRNHNAEHGTFEPRIVNAGFIPERGNRYAYFTGTGPLVTRDAEGDAVPADA
GGIGVDRSRDASRRAITLADLPAWVSRQVGVFGTCPDCYVTMGCAGNIDIDDTVDVWLISTKPLKDEYGEAVPPGTPTNV
VNDVDG
>Mature_245_residues
PALVRGSHMCQGALSMAANLECPKCGSELDVTGRGPGAIIRCACGNLSAVPKRSYWASPRGVALALGVFLLCPCVGILAA
IAIPNYNKLPVRSKQQECKANLRGLYAAQRNHNAEHGTFEPRIVNAGFIPERGNRYAYFTGTGPLVTRDAEGDAVPADAG
GIGVDRSRDASRRAITLADLPAWVSRQVGVFGTCPDCYVTMGCAGNIDIDDTVDVWLISTKPLKDEYGEAVPPGTPTNVV
NDVDG

Specific function: Makes up the pili which are long filamentous (less than 10 nm thick and up to 10 um long) polarly located appendages. They are required for social (S) motility [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Fimbrium [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the N-Me-Phe pilin family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012902
- InterPro:   IPR001120 [H]

Pfam domain/function: PF07963 N_methyl [H]

EC number: NA

Molecular weight: Translated: 25974; Mature: 25843

Theoretical pI: Translated: 7.17; Mature: 7.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.5 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
4.5 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPALVRGSHMCQGALSMAANLECPKCGSELDVTGRGPGAIIRCACGNLSAVPKRSYWASP
CCCCCCCCHHHHHHHHHHHCCCCCCCCCCEEECCCCCCEEEEEECCCCCCCCCCCCCCCC
RGVALALGVFLLCPCVGILAAIAIPNYNKLPVRSKQQECKANLRGLYAAQRNHNAEHGTF
CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCC
EPRIVNAGFIPERGNRYAYFTGTGPLVTRDAEGDAVPADAGGIGVDRSRDASRRAITLAD
CCEEEECCCCCCCCCEEEEEECCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEC
LPAWVSRQVGVFGTCPDCYVTMGCAGNIDIDDTVDVWLISTKPLKDEYGEAVPPGTPTNV
CCHHHHCCCCCEECCCHHEEEECCCCCCCCCCCEEEEEEECCCCHHHCCCCCCCCCCCCC
VNDVDG
CCCCCC
>Mature Secondary Structure 
PALVRGSHMCQGALSMAANLECPKCGSELDVTGRGPGAIIRCACGNLSAVPKRSYWASP
CCCCCCCHHHHHHHHHHHCCCCCCCCCCEEECCCCCCEEEEEECCCCCCCCCCCCCCCC
RGVALALGVFLLCPCVGILAAIAIPNYNKLPVRSKQQECKANLRGLYAAQRNHNAEHGTF
CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCC
EPRIVNAGFIPERGNRYAYFTGTGPLVTRDAEGDAVPADAGGIGVDRSRDASRRAITLAD
CCEEEECCCCCCCCCEEEEEECCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEC
LPAWVSRQVGVFGTCPDCYVTMGCAGNIDIDDTVDVWLISTKPLKDEYGEAVPPGTPTNV
CCHHHHCCCCCEECCCHHEEEECCCCCCCCCCCEEEEEEECCCCHHHCCCCCCCCCCCCC
VNDVDG
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8748037 [H]