| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is pgcA [H]
Identifier: 108759054
GI number: 108759054
Start: 7084937
End: 7086664
Strand: Reverse
Name: pgcA [H]
Synonym: MXAN_5717
Alternate gene names: 108759054
Gene position: 7086664-7084937 (Counterclockwise)
Preceding gene: 108761287
Following gene: 108757559
Centisome position: 77.54
GC content: 72.51
Gene sequence:
>1728_bases ATGGACACCACCGGACTGAAGGAGCGGGCGGAGGCGTGGCGTCAGGCGGACCCGGATCCGTCCACCGCGGCGGAGCTGGC GGCGTTGCTGGCGAAGGCGGACTGGGCCGAGCTGGAGGACCGCTTCTCGCAGGACCTGGAGTTCGGCACCGCGGGCCTGC GCGGCGTGCTGGGCGCCGGTCCCAACCGGATGAACCGCGCCGTCATCCGCCGCACCACCGCGGGCCTTGCGCGCTACCTC AAGGAGCAGGTGCCGGACGTCGCCACCCGGGGCGTGGTGGTGGGCCGTGACGCGCGCAACCTGAGCGCGGAGCTGGCCGA GGACACCGCCGCGGTGCTCGCCGCCGAGGGCATCCCCGCCCATGTCTTCCCGGAGCCGGTGCCCACGCCGCTGGTGGCCT TTGCCGCGCTGCACCTCAACGCCGCCGCGGCCGTCATGGTGACGGCCAGCCACAACCCGCCCGAGTACAACGGCTACAAG GTCTATTGGGGCAACGGCGCGCAAATCATCCCGCCGCATGACACGGGCATCGCCTCCGCCATCGCCCGGGTGGAGCCCGC CAACCGCGTGCCGCTGCTGACGCCGGCCGATGCGCGCGCCAAGGGCCTGTGGCGGGATTTGCCTGCGGCCATCGGCGATG CCTACGTGCGCGCCATCCTGGGGCTGCGCGTGGTGGGCAAGGGCTCCGAGTCGCTGTCCATCGTCTACACCGCCATGCAC GGCGTGGGCGGCGACTGGGCCGTGCGCGCCCTGCGCGAGGCGGGCTTCCCGCGCGTCACCCCCGTGGCCGAGCAGCAGCA GCCGGATGGCCGCTTCCCCACCGTGCGCTTCCCCAACCCGGAGGAGCCGGGCGCCATGGACCTGGCCACCGCCACCGCCG AGCGCGTGAAGGCGGACGTGGTGCTGGCCAATGACCCGGACGCGGACCGGCTGGCCGTCATGGCGCGCGACGCGGACGGG TCGCTGCGGCTGCTGACGGGCAACGAGGTGGGCGTGCTGCTGGGCCACTACGTCCTCACCCAGGGGGCGAAGCAGGGCAA GCCCCACGTCGTCACCACCATCGTCTCCTCGGCGCAGTTGGGAGACATCGCGCGCTCGCTGGGCGCCGCGTGTGACGAGG TGCTCACCGGCTTCAAGTGGATCGCCAACCGCGCGCTGGAGCGCGAGCAGGCCGAGGGCACCCGCTTCGTCTTCGGTTAC GAGGAGGCGCTGGGCTACACCGTGGGCACGGTGACGCGCGACAAGGACGGCGTGGGCTCGGCGCTCGTCATGGCGGACCT GGCGGCGTGGTGTCAGGCGCGCGGCACCACGGTGCTGGGCTACCTGGAGGAGATTCAGCGCGCGCATGGCCTGTACGTGG GCGCGCAGCGCAACTTCACGTTCCCCGGTGCGGCGGGCGCGCAGGTCATCCGCGGCATCATGGACGCGTTCCGTGCCTCG CCTCCGAAGGACATTGGCGGCGACGCCGTCCGTGCCGTGAGCGACTACAAGAAGGGCGAGCGGGGCCTGCCTCCGTCCAA CGTCGTCGCGCTCGAGTTGGAGAGCGGCGGCCGCGTCACGCTGCGCCCCTCCGGCACCGAGCCGAAAATCAAATACTACT TCGAGCTGAAGGAGACGCTCGCCGACGGTGAGCCCCTGGCTCAGGCCCGTGCGCGCGCCGAGTCCCGGCTGGCCCGCTTC ATCGATGCTTTCCTCGGCCTCGCGCGTGAGCGCGGGCAGCCGGCATGA
Upstream 100 bases:
>100_bases CGCGCCACCCGCAGCAAGCTGACCGACTACACCTGAACAACCGGCGTGCGAGCCCCGTGCCTCGCGCGCCCTCAACGGCT ACACGAGGCTTCGAGGGCTC
Downstream 100 bases:
>100_bases GTCTAGAGACGCAGCACCGCACCCACCGCCCGCCGTCCTCGGCGGCCCTCGCAGAAAGGTACCGTGTGAAGCGACTGCTC CCCGGAGTCCTCCTCGCTTG
Product: putative phosphoglucomutase/phosphomannomutase
Products: NA
Alternate protein names: PGM; Alpha-phosphoglucomutase; Glucose phosphomutase [H]
Number of amino acids: Translated: 575; Mature: 575
Protein sequence:
>575_residues MDTTGLKERAEAWRQADPDPSTAAELAALLAKADWAELEDRFSQDLEFGTAGLRGVLGAGPNRMNRAVIRRTTAGLARYL KEQVPDVATRGVVVGRDARNLSAELAEDTAAVLAAEGIPAHVFPEPVPTPLVAFAALHLNAAAAVMVTASHNPPEYNGYK VYWGNGAQIIPPHDTGIASAIARVEPANRVPLLTPADARAKGLWRDLPAAIGDAYVRAILGLRVVGKGSESLSIVYTAMH GVGGDWAVRALREAGFPRVTPVAEQQQPDGRFPTVRFPNPEEPGAMDLATATAERVKADVVLANDPDADRLAVMARDADG SLRLLTGNEVGVLLGHYVLTQGAKQGKPHVVTTIVSSAQLGDIARSLGAACDEVLTGFKWIANRALEREQAEGTRFVFGY EEALGYTVGTVTRDKDGVGSALVMADLAAWCQARGTTVLGYLEEIQRAHGLYVGAQRNFTFPGAAGAQVIRGIMDAFRAS PPKDIGGDAVRAVSDYKKGERGLPPSNVVALELESGGRVTLRPSGTEPKIKYYFELKETLADGEPLAQARARAESRLARF IDAFLGLARERGQPA
Sequences:
>Translated_575_residues MDTTGLKERAEAWRQADPDPSTAAELAALLAKADWAELEDRFSQDLEFGTAGLRGVLGAGPNRMNRAVIRRTTAGLARYL KEQVPDVATRGVVVGRDARNLSAELAEDTAAVLAAEGIPAHVFPEPVPTPLVAFAALHLNAAAAVMVTASHNPPEYNGYK VYWGNGAQIIPPHDTGIASAIARVEPANRVPLLTPADARAKGLWRDLPAAIGDAYVRAILGLRVVGKGSESLSIVYTAMH GVGGDWAVRALREAGFPRVTPVAEQQQPDGRFPTVRFPNPEEPGAMDLATATAERVKADVVLANDPDADRLAVMARDADG SLRLLTGNEVGVLLGHYVLTQGAKQGKPHVVTTIVSSAQLGDIARSLGAACDEVLTGFKWIANRALEREQAEGTRFVFGY EEALGYTVGTVTRDKDGVGSALVMADLAAWCQARGTTVLGYLEEIQRAHGLYVGAQRNFTFPGAAGAQVIRGIMDAFRAS PPKDIGGDAVRAVSDYKKGERGLPPSNVVALELESGGRVTLRPSGTEPKIKYYFELKETLADGEPLAQARARAESRLARF IDAFLGLARERGQPA >Mature_575_residues MDTTGLKERAEAWRQADPDPSTAAELAALLAKADWAELEDRFSQDLEFGTAGLRGVLGAGPNRMNRAVIRRTTAGLARYL KEQVPDVATRGVVVGRDARNLSAELAEDTAAVLAAEGIPAHVFPEPVPTPLVAFAALHLNAAAAVMVTASHNPPEYNGYK VYWGNGAQIIPPHDTGIASAIARVEPANRVPLLTPADARAKGLWRDLPAAIGDAYVRAILGLRVVGKGSESLSIVYTAMH GVGGDWAVRALREAGFPRVTPVAEQQQPDGRFPTVRFPNPEEPGAMDLATATAERVKADVVLANDPDADRLAVMARDADG SLRLLTGNEVGVLLGHYVLTQGAKQGKPHVVTTIVSSAQLGDIARSLGAACDEVLTGFKWIANRALEREQAEGTRFVFGY EEALGYTVGTVTRDKDGVGSALVMADLAAWCQARGTTVLGYLEEIQRAHGLYVGAQRNFTFPGAAGAQVIRGIMDAFRAS PPKDIGGDAVRAVSDYKKGERGLPPSNVVALELESGGRVTLRPSGTEPKIKYYFELKETLADGEPLAQARARAESRLARF IDAFLGLARERGQPA
Specific function: Catalyzes the interconversion between glucose-6- phosphate and alpha-glucose-1-phosphate. This is the first step in the biosynthesis of diglucosyl-diacylglycerol (Glc2-DAG), i.e. the predominant glycolipid found in B.subtilis membrane, which is also used
COG id: COG1109
COG function: function code G; Phosphomannomutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphohexose mutase family [H]
Homologues:
Organism=Homo sapiens, GI63055049, Length=567, Percent_Identity=35.8024691358025, Blast_Score=332, Evalue=7e-91, Organism=Homo sapiens, GI31377548, Length=587, Percent_Identity=35.7751277683135, Blast_Score=317, Evalue=2e-86, Organism=Escherichia coli, GI1788361, Length=270, Percent_Identity=29.2592592592593, Blast_Score=67, Evalue=4e-12, Organism=Escherichia coli, GI1789566, Length=495, Percent_Identity=25.6565656565657, Blast_Score=66, Evalue=7e-12, Organism=Caenorhabditis elegans, GI71993870, Length=555, Percent_Identity=36.3963963963964, Blast_Score=301, Evalue=7e-82, Organism=Caenorhabditis elegans, GI71993878, Length=319, Percent_Identity=37.9310344827586, Blast_Score=195, Evalue=5e-50, Organism=Saccharomyces cerevisiae, GI6323934, Length=590, Percent_Identity=36.4406779661017, Blast_Score=303, Evalue=5e-83, Organism=Drosophila melanogaster, GI20129809, Length=592, Percent_Identity=36.6554054054054, Blast_Score=323, Evalue=3e-88, Organism=Drosophila melanogaster, GI24651977, Length=460, Percent_Identity=40.4347826086956, Blast_Score=302, Evalue=5e-82, Organism=Drosophila melanogaster, GI24653722, Length=558, Percent_Identity=32.258064516129, Blast_Score=258, Evalue=5e-69,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005844 - InterPro: IPR016055 - InterPro: IPR005845 - InterPro: IPR005846 - InterPro: IPR005843 - InterPro: IPR016066 - InterPro: IPR005841 [H]
Pfam domain/function: PF02878 PGM_PMM_I; PF02879 PGM_PMM_II; PF02880 PGM_PMM_III; PF00408 PGM_PMM_IV [H]
EC number: =5.4.2.2 [H]
Molecular weight: Translated: 61157; Mature: 61157
Theoretical pI: Translated: 6.16; Mature: 6.16
Prosite motif: PS00710 PGM_PMM
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDTTGLKERAEAWRQADPDPSTAAELAALLAKADWAELEDRFSQDLEFGTAGLRGVLGAG CCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHCCC PNRMNRAVIRRTTAGLARYLKEQVPDVATRGVVVGRDARNLSAELAEDTAAVLAAEGIPA CCHHHHHHHHHHHHHHHHHHHHHCCCHHHCCEEEECCCHHHHHHHHHHHHHHHHCCCCCC HVFPEPVPTPLVAFAALHLNAAAAVMVTASHNPPEYNGYKVYWGNGAQIIPPHDTGIASA CCCCCCCCHHHHHHHHHHHCCEEEEEEEECCCCCCCCCEEEEECCCCEEECCCCCHHHHH IARVEPANRVPLLTPADARAKGLWRDLPAAIGDAYVRAILGLRVVGKGSESLSIVYTAMH HHHCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCEEEEEEEHH GVGGDWAVRALREAGFPRVTPVAEQQQPDGRFPTVRFPNPEEPGAMDLATATAERVKADV CCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHEEEE VLANDPDADRLAVMARDADGSLRLLTGNEVGVLLGHYVLTQGAKQGKPHVVTTIVSSAQL EEECCCCCCEEEEEEECCCCCEEEEECCCHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHH GDIARSLGAACDEVLTGFKWIANRALEREQAEGTRFVFGYEEALGYTVGTVTRDKDGVGS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHCEEEEEEECCCCCCCH ALVMADLAAWCQARGTTVLGYLEEIQRAHGLYVGAQRNFTFPGAAGAQVIRGIMDAFRAS HHHHHHHHHHHHHCCCHHHHHHHHHHHHCCEEEECCCCCCCCCCHHHHHHHHHHHHHHCC PPKDIGGDAVRAVSDYKKGERGLPPSNVVALELESGGRVTLRPSGTEPKIKYYFELKETL CCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEEECCCCEEEECCCCCCCCEEEEEEEHHHH ADGEPLAQARARAESRLARFIDAFLGLARERGQPA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MDTTGLKERAEAWRQADPDPSTAAELAALLAKADWAELEDRFSQDLEFGTAGLRGVLGAG CCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHCCC PNRMNRAVIRRTTAGLARYLKEQVPDVATRGVVVGRDARNLSAELAEDTAAVLAAEGIPA CCHHHHHHHHHHHHHHHHHHHHHCCCHHHCCEEEECCCHHHHHHHHHHHHHHHHCCCCCC HVFPEPVPTPLVAFAALHLNAAAAVMVTASHNPPEYNGYKVYWGNGAQIIPPHDTGIASA CCCCCCCCHHHHHHHHHHHCCEEEEEEEECCCCCCCCCEEEEECCCCEEECCCCCHHHHH IARVEPANRVPLLTPADARAKGLWRDLPAAIGDAYVRAILGLRVVGKGSESLSIVYTAMH HHHCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCEEEEEEEHH GVGGDWAVRALREAGFPRVTPVAEQQQPDGRFPTVRFPNPEEPGAMDLATATAERVKADV CCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHEEEE VLANDPDADRLAVMARDADGSLRLLTGNEVGVLLGHYVLTQGAKQGKPHVVTTIVSSAQL EEECCCCCCEEEEEEECCCCCEEEEECCCHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHH GDIARSLGAACDEVLTGFKWIANRALEREQAEGTRFVFGYEEALGYTVGTVTRDKDGVGS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHCEEEEEEECCCCCCCH ALVMADLAAWCQARGTTVLGYLEEIQRAHGLYVGAQRNFTFPGAAGAQVIRGIMDAFRAS HHHHHHHHHHHHHCCCHHHHHHHHHHHHCCEEEECCCCCCCCCCHHHHHHHHHHHHHHCC PPKDIGGDAVRAVSDYKKGERGLPPSNVVALELESGGRVTLRPSGTEPKIKYYFELKETL CCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEEECCCCEEEECCCCCCCCEEEEEEEHHHH ADGEPLAQARARAESRLARFIDAFLGLARERGQPA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9579061; 9384377; 2127799 [H]