Definition Myxococcus xanthus DK 1622 chromosome, complete genome.
Accession NC_008095
Length 9,139,763

Click here to switch to the map view.

The map label for this gene is dksA [C]

Identifier: 108761287

GI number: 108761287

Start: 7086729

End: 7087121

Strand: Reverse

Name: dksA [C]

Synonym: MXAN_5718

Alternate gene names: 108761287

Gene position: 7087121-7086729 (Counterclockwise)

Preceding gene: 108758066

Following gene: 108759054

Centisome position: 77.54

GC content: 67.18

Gene sequence:

>393_bases
GTGAACGCGAAACAGCGAGACGAGCTCAAGGCGCTGCTGCTCGCGCTCCACTCGGAGCTGACGGACAAGACGCCGTCGAG
AATCGAGCCCAACCGCACCGATGACGCGCGCATCGGCGGCGACGAGGATGAGCAGCCGCTCAATGAGATGATGCAGGCCA
TCGCCTCCAACCGGAACCGGAACATGGATGGCGTGCTGGCCCGCGTGCTCAAGGCGCTGGGCAAGCTGCGCGACGACCCG
GACGCGTTCGGTGAGTGCGAGGAGTGCGGCGACGAGATTCCGCTCGGGCGGCTGCGCGCCATGCCCTACGCGGAGTTCTG
CGTGACGTGCCAGGGCAACAAGGACGGCCCCAAGGGTCGCGCCACCCGCAGCAAGCTGACCGACTACACCTGA

Upstream 100 bases:

>100_bases
GATGCTGCGCGCGGGGGCCAACCGTGTGGGTGCGTCCGCGTCGGTGGCCATCGTCTCCGGGCAGACCTCCTCCGCGAAGT
ACTGACCCGGGGCGGACACC

Downstream 100 bases:

>100_bases
ACAACCGGCGTGCGAGCCCCGTGCCTCGCGCGCCCTCAACGGCTACACGAGGCTTCGAGGGCTCATGGACACCACCGGAC
TGAAGGAGCGGGCGGAGGCG

Product: C4 zinc finger domain-containing protein

Products: NA

Alternate protein names: C4-Type Zinc Finger Domain Protein Dksa/Trar Family; C4 Zinc Finger Domain-Containing Protein

Number of amino acids: Translated: 130; Mature: 130

Protein sequence:

>130_residues
MNAKQRDELKALLLALHSELTDKTPSRIEPNRTDDARIGGDEDEQPLNEMMQAIASNRNRNMDGVLARVLKALGKLRDDP
DAFGECEECGDEIPLGRLRAMPYAEFCVTCQGNKDGPKGRATRSKLTDYT

Sequences:

>Translated_130_residues
MNAKQRDELKALLLALHSELTDKTPSRIEPNRTDDARIGGDEDEQPLNEMMQAIASNRNRNMDGVLARVLKALGKLRDDP
DAFGECEECGDEIPLGRLRAMPYAEFCVTCQGNKDGPKGRATRSKLTDYT
>Mature_130_residues
MNAKQRDELKALLLALHSELTDKTPSRIEPNRTDDARIGGDEDEQPLNEMMQAIASNRNRNMDGVLARVLKALGKLRDDP
DAFGECEECGDEIPLGRLRAMPYAEFCVTCQGNKDGPKGRATRSKLTDYT

Specific function: Dosage-Dependent Suppressor Of A Dnak Deletion Mutation. It Suppressed Not Only The Temperature-Sensitive Growth But Also The Filamentous Phenotype Of The Dnak Deletion Strain, While The Defect Of Lambda Growth Is Not Suppressed. [C]

COG id: COG1734

COG function: function code T; DnaK suppressor protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14465; Mature: 14465

Theoretical pI: Translated: 4.85; Mature: 4.85

Prosite motif: PS01102 ZF_DKSA_1 ; PS51128 ZF_DKSA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
6.9 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
6.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAKQRDELKALLLALHSELTDKTPSRIEPNRTDDARIGGDEDEQPLNEMMQAIASNRNR
CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCC
NMDGVLARVLKALGKLRDDPDAFGECEECGDEIPLGRLRAMPYAEFCVTCQGNKDGPKGR
CHHHHHHHHHHHHHHCCCCCHHCCCHHHCCCCCCHHHHHCCCHHHHHEECCCCCCCCCCC
ATRSKLTDYT
HHHHHHCCCC
>Mature Secondary Structure
MNAKQRDELKALLLALHSELTDKTPSRIEPNRTDDARIGGDEDEQPLNEMMQAIASNRNR
CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCC
NMDGVLARVLKALGKLRDDPDAFGECEECGDEIPLGRLRAMPYAEFCVTCQGNKDGPKGR
CHHHHHHHHHHHHHHCCCCCHHCCCHHHCCCCCCHHHHHCCCHHHHHEECCCCCCCCCCC
ATRSKLTDYT
HHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA