| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
Click here to switch to the map view.
The map label for this gene is nuoI
Identifier: 108758967
GI number: 108758967
Start: 3175318
End: 3176082
Strand: Reverse
Name: nuoI
Synonym: MXAN_2726
Alternate gene names: 108758967
Gene position: 3176082-3175318 (Counterclockwise)
Preceding gene: 108761566
Following gene: 108757605
Centisome position: 34.75
GC content: 67.06
Gene sequence:
>765_bases ATGGCCTACAAGGTAAGCAAGGACCCTCGCACGGATATCCGCGAGCGGACCTATGTGCCCAACCTGCTCCGCGGCCTGGG CATCACCGCGAAGCACTTCTTCCGCAACCTCTTCGGGACGCGTGACACCAACACGCAGGTGGTGGACCGCACCGGCGCCA GCCTGATGACGACGGTGGCGTACCCCGAGGAGAAGCCCATCTACCCCGAGGGCTACCGCGGCCTGCACCGGCTGGTTCCG CGCGAGGACGGCAAGCCGCGCTGCGTGGCTTGCTACATGTGCGCCACCATCTGCCCGGCGCAGTGCATCTACATCGAGGC GGGTGAGTACGAGGACGAAGCCTCGGACTCCGAGGACCGCGTCATCGAGAAGTACCCCACCCAGTTCGTCATCGACGAGC TGCGGTGCATCGTGTGCGGCCTCTGCGTGGATGCGTGCCCCAAGGACGCCATCCGCATGGACACCTACACGCACACCCCA CCCGAGTACACGCGGCAGAACTTCGTCTACGACATTCCGAAGCTGCTCAAGGGCGCGCCGGTGTCCCACCCGTCGGACCC GTGGAACAAGCGCGAGGGCTCCGAGGAGCCGCACCACGTCCACAAGGAAGCGCACACTCGCATCGGCGAGGGCCTGGTGG AGCTGAAGCTGCCGCACGGAGAGCACGGCGGCCACGGCAAGGCGCTGCCCGCGGGGGCCCAGGCGGGCCACCAGGCGGTC GTCACGCAGCAGGGCCCCATCCAGGTGACGAAGTTCATCAAGTGA
Upstream 100 bases:
>100_bases CGGTGCCCATGACCTGCCGGCGCACGCCCACGGCGTGGCCCCGGCCTCCACCCACTAGGCCGCCCCTTTCGGCCCCAGCA TCCGGGAATCGAGAACCATC
Downstream 100 bases:
>100_bases GTCCAGATTCCCAGTGAGGCCGTAGCGGTCTCACCCGGATTCCCGGCCCGCCCTCCCGCATTGAAGCGGAAGGCGGGCCG GCGCTTTTTCAGGGGGCTGG
Product: NADH dehydrogenase I subunit I
Products: NA
Alternate protein names: NADH dehydrogenase I subunit I; NDH-1 subunit I
Number of amino acids: Translated: 254; Mature: 253
Protein sequence:
>254_residues MAYKVSKDPRTDIRERTYVPNLLRGLGITAKHFFRNLFGTRDTNTQVVDRTGASLMTTVAYPEEKPIYPEGYRGLHRLVP REDGKPRCVACYMCATICPAQCIYIEAGEYEDEASDSEDRVIEKYPTQFVIDELRCIVCGLCVDACPKDAIRMDTYTHTP PEYTRQNFVYDIPKLLKGAPVSHPSDPWNKREGSEEPHHVHKEAHTRIGEGLVELKLPHGEHGGHGKALPAGAQAGHQAV VTQQGPIQVTKFIK
Sequences:
>Translated_254_residues MAYKVSKDPRTDIRERTYVPNLLRGLGITAKHFFRNLFGTRDTNTQVVDRTGASLMTTVAYPEEKPIYPEGYRGLHRLVP REDGKPRCVACYMCATICPAQCIYIEAGEYEDEASDSEDRVIEKYPTQFVIDELRCIVCGLCVDACPKDAIRMDTYTHTP PEYTRQNFVYDIPKLLKGAPVSHPSDPWNKREGSEEPHHVHKEAHTRIGEGLVELKLPHGEHGGHGKALPAGAQAGHQAV VTQQGPIQVTKFIK >Mature_253_residues AYKVSKDPRTDIRERTYVPNLLRGLGITAKHFFRNLFGTRDTNTQVVDRTGASLMTTVAYPEEKPIYPEGYRGLHRLVPR EDGKPRCVACYMCATICPAQCIYIEAGEYEDEASDSEDRVIEKYPTQFVIDELRCIVCGLCVDACPKDAIRMDTYTHTPP EYTRQNFVYDIPKLLKGAPVSHPSDPWNKREGSEEPHHVHKEAHTRIGEGLVELKLPHGEHGGHGKALPAGAQAGHQAVV TQQGPIQVTKFIK
Specific function: NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocat
COG id: COG1143
COG function: function code C; Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I)
Gene ontology:
Cell location: Cell inner membrane; Peripheral membrane protein (Potential)
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 4Fe-4S ferredoxin-type domains
Homologues:
Organism=Homo sapiens, GI4505371, Length=184, Percent_Identity=33.1521739130435, Blast_Score=79, Evalue=6e-15, Organism=Escherichia coli, GI1788617, Length=156, Percent_Identity=35.8974358974359, Blast_Score=89, Evalue=4e-19, Organism=Caenorhabditis elegans, GI17555194, Length=160, Percent_Identity=32.5, Blast_Score=75, Evalue=3e-14, Organism=Drosophila melanogaster, GI17864306, Length=171, Percent_Identity=34.5029239766082, Blast_Score=80, Evalue=1e-15,
Paralogues:
None
Copy number: 60 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NUOI_MYXXD (Q1D8T0)
Other databases:
- EMBL: CP000113 - RefSeq: YP_630943.1 - STRING: Q1D8T0 - GeneID: 4101993 - GenomeReviews: CP000113_GR - KEGG: mxa:MXAN_2726 - TIGR: MXAN_2726 - eggNOG: COG1143 - HOGENOM: HBG724359 - OMA: YEDEASD - PhylomeDB: Q1D8T0 - ProtClustDB: CLSK946257 - BioCyc: MXAN246197:MXAN_2726-MONOMER - HAMAP: MF_01351 - InterPro: IPR001450 - InterPro: IPR017896 - InterPro: IPR017900 - InterPro: IPR012285 - InterPro: IPR010226 - Gene3D: G3DSA:1.10.1060.10
Pfam domain/function: PF00037 Fer4
EC number: =1.6.99.5
Molecular weight: Translated: 28498; Mature: 28366
Theoretical pI: Translated: 7.11; Mature: 7.11
Prosite motif: PS00198 4FE4S_FER_1; PS51379 4FE4S_FER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.5 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 3.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAYKVSKDPRTDIRERTYVPNLLRGLGITAKHFFRNLFGTRDTNTQVVDRTGASLMTTVA CCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCEECCCCCHHEEEEE YPEEKPIYPEGYRGLHRLVPREDGKPRCVACYMCATICPAQCIYIEAGEYEDEASDSEDR CCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHH VIEKYPTQFVIDELRCIVCGLCVDACPKDAIRMDTYTHTPPEYTRQNFVYDIPKLLKGAP HHHHCCHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHCCCC VSHPSDPWNKREGSEEPHHVHKEAHTRIGEGLVELKLPHGEHGGHGKALPAGAQAGHQAV CCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCCCCCEEE VTQQGPIQVTKFIK EECCCCCHHHCCCC >Mature Secondary Structure AYKVSKDPRTDIRERTYVPNLLRGLGITAKHFFRNLFGTRDTNTQVVDRTGASLMTTVA CCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCEECCCCCHHEEEEE YPEEKPIYPEGYRGLHRLVPREDGKPRCVACYMCATICPAQCIYIEAGEYEDEASDSEDR CCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHH VIEKYPTQFVIDELRCIVCGLCVDACPKDAIRMDTYTHTPPEYTRQNFVYDIPKLLKGAP HHHHCCHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHCCCC VSHPSDPWNKREGSEEPHHVHKEAHTRIGEGLVELKLPHGEHGGHGKALPAGAQAGHQAV CCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCCCCCEEE VTQQGPIQVTKFIK EECCCCCHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA