| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108758878
Identifier: 108758878
GI number: 108758878
Start: 4936678
End: 4939293
Strand: Reverse
Name: 108758878
Synonym: MXAN_4030
Alternate gene names: NA
Gene position: 4939293-4936678 (Counterclockwise)
Preceding gene: 108759843
Following gene: 108759945
Centisome position: 54.04
GC content: 72.97
Gene sequence:
>2616_bases ATGAGTCACCCCCCCCGTCCCCTCGCGCTGGCTTGCCTGGCCTGTGTCCTCCTGTACCTGAGCGGCTGCGGCGACATGGA CATGGGGCCTGACAACCCCGTGGGTCCGTTCCCACAGGTGACTTACTGCTCCGTCGATCAGGACTGCCCGGACCCCTCGC TCTTCTTCTGTGACTCGGCCACCTCGCGCTGCGAGCCCGCCTGCCTGACGCGCGAGGATTGCGGCGTGGCGCGGCGGGGC CCTCATGCACTGGCCGCGTGTGACGAGGTAGGCGGCGCTGGCTGCCAATGCGACATGAACCGGTGCGTGCCCGTTGTCTG TGCCGCCGACACGGACTGTGACTCAGGCACGGTGTGCCGAGACGGCGCGTGTGGCTCGCCGCCGTCCGAATCCCGCGCGG TCGCGTGCGAGGTGACGCCGGATGTCGTCGTGGGCACCCCGGGCATGACGGTGGACTTCCGCGTGTGGGTGCGCGAATCG ACGGGCGCTCCGTTGGTGTTGCGTGACGGCGTGGCATGGGAGGTGCTGTCTCCCTCCGTGGTCGGAGGCGGGGGCGGCCA CCAGGCCTCTGTCGTGCTGAGCGAGCCCGCCTCGGAGCACCAGGCGCTGGCGGTCCGAGTGGGCAATGTCTCCTGCCATG CGCGCGTCACCGTGCTGCCCGCCGAAGTAGCCCCGGGTGGGGTGCGCGTGCTGGTGGTGGATGCGCTGACCGGGCGCCCG GTGCCGCTGGCCGTCGTCGCGGTGTCCGCCGATGACGGCGGCCTGGAAGCGGCGATGGTGACGAACGCCGACGGAGCCGT CTGGGTGCCCGCGGAAGGCGAGGTGGCGCTCTCCGCCTTCCACTCCGACTACGGCTACCTGACGCTGGCGCGCCACGACG CGAGCCAGTTCCGCGACGTGCGGATGGCCCTGCGCCGCAACCCCTTGGACCGCTTCGGCGGCGTGAAGGGCCCATTCCCC ACGTTGACGGAGACCTTCTCGACGGCGGTTTCGCTGCGCGTGGGGCTGATGGGGTTGTCCGTGCCCGGGCTCCCCACCGA CCTGGCTCCCGAGTCCTTCCTGGGCCCGGAGCACGAGGTGGCGCTCCCCGTGGGCACGGGCCAGGACCGCCTGTCGCTGC CGTCGGGCAGCGCACTGTGGTTGACGGGCAGCACGGCTCCAGACGTCGCGGCCCCGGGCGTGGCGGGTGTGTGTGACAGC TCGCTTCCGGGTGTGTTGGATGCGGAGCTGGCCATTCGCACGGGCGCCTGTGGGACGCGGACGGCCTGGGCGCTGACGGG CGAGCTCCCCCTGAAGGAACTCCCCCTCAACCTCATGGCGCCGGGGACGGATCCGTTGCTGCAATTGGGGCAGTTGTTGC CCGGCTCGACGCGCTTCTTCTCGGCGCTGTCGCGTGACGCCCGCTTCACCCTGGCGCCCACGCCCGGCATCCTCACCGGC GAGCCGGACACCCGTGCGGCGGAGTACGCGCAGGCGCTGCCTTTCGAGCGGGAAACGCCGGGCGTGCGGCTGTCGTTCCC CTTCGCCGTGCGCGTACCGCCGCTGCCTCAGTACCGGGGCGCGCACCTGGACCGCGCCTACGTGCTGGCCACCGTGGCGG TCCCCGGCCGAGGCATGGTTCCGCTGGGGCTGGGCGCCGCGGCCAACGTGGCGCCGGCCGATCCGAACACGGACGCCGAT GCGCGGCTGGGCCGGCCCGGGCTGGTGCCCGTGCGCATGGCGCCCACGCACCGGGGCCTGGAGGGCCTGCCGTACCGGCT GGTGGTGTCCGCCACATCAGGTGACCAGGCCGAGGACGGCACGGTGGCGACCAGCACGCTCGTGGCGAACCTGCCCAGGC CGGAGTTCGACCCGGACGGCGTGCAGCCCGTGGACGCGGGGCTGAGCTTCCTCTCCCTACCGGAGTCCGTTCGCTACAAC TTCGATGGGGCCCCCCGCGGCGAGCTCGTCGGCCGCGAGTTCCAGGCCCAGGTGGACGGGCGGGCCAGCGTGGTGCGCGC CGAGTTCACCAACCGCGCCGGCCGCCGCTGGACGGTGTTGATGGATCCGGACGATACGGACGACGGCGTCGTCGTTCCCC GGCCGCCGCCAGGGTTCGAGGACCGCACCTTCGACTTCGACGGCGTGTTGCAGGCGACGCGGGCGAAGCTCCAGGTGGAG GCGCTGCGCGTGCGGGGCCTGGACCGGCGTGTGGGGCAGGGCCCGTCCCGCCTGGTGGCTTCAGAGGGCCTGGGCGCGGA GCGGCTCGCGGACCTGACGGATGCCGTCGCCACGCTGAGCGTGGGCCGGCCGGAGGTGACGTGGCGCCATCCGGAGGCGG ACGGGCAGCGGCTGGCCCGAGGCAGCGCGGTGCGGGTGAGCGTCTCCGGCTTCCGGCTGGGCACGGGTTCCGGCGGCGAA GGCCAGGTGCGCGTCAGCATGCGGGGCGGCTCGGGTTGCAACGACCAGGCGCTGTTCGCCTCCGCCCCCATTGCACCGGG ACGCGGCGAGGTGGAGTTGCAGCTCCCGGCGCAGTGCTCGGGGCTGGGCGTGTCGCTGGTGGCCACCCTGGTGGACCTGG AGGGTGACCCCCTGCGTCCGCTCGTCACCGCGACCCGGCAGGTCGACATTCCCTGA
Upstream 100 bases:
>100_bases TATGATGGGGCTCGAAGGGCGGCGGCCGGCGCCGCGTACCGTCGCGCAGCGCGCGTCCTGCCTGTAAGGTCGCGGACGGT CCCCCCGGAGCCGCATTCGT
Downstream 100 bases:
>100_bases GCTCCGCGTAAGGGAACATCCGCCTGGGTTTTCGCGTGCTGGCTCGCTTTCGTGATTTGCCGGGTGGTAGCGTTGTCGTT CCGGGAGGCAAGGTGCAGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 871; Mature: 870
Protein sequence:
>871_residues MSHPPRPLALACLACVLLYLSGCGDMDMGPDNPVGPFPQVTYCSVDQDCPDPSLFFCDSATSRCEPACLTREDCGVARRG PHALAACDEVGGAGCQCDMNRCVPVVCAADTDCDSGTVCRDGACGSPPSESRAVACEVTPDVVVGTPGMTVDFRVWVRES TGAPLVLRDGVAWEVLSPSVVGGGGGHQASVVLSEPASEHQALAVRVGNVSCHARVTVLPAEVAPGGVRVLVVDALTGRP VPLAVVAVSADDGGLEAAMVTNADGAVWVPAEGEVALSAFHSDYGYLTLARHDASQFRDVRMALRRNPLDRFGGVKGPFP TLTETFSTAVSLRVGLMGLSVPGLPTDLAPESFLGPEHEVALPVGTGQDRLSLPSGSALWLTGSTAPDVAAPGVAGVCDS SLPGVLDAELAIRTGACGTRTAWALTGELPLKELPLNLMAPGTDPLLQLGQLLPGSTRFFSALSRDARFTLAPTPGILTG EPDTRAAEYAQALPFERETPGVRLSFPFAVRVPPLPQYRGAHLDRAYVLATVAVPGRGMVPLGLGAAANVAPADPNTDAD ARLGRPGLVPVRMAPTHRGLEGLPYRLVVSATSGDQAEDGTVATSTLVANLPRPEFDPDGVQPVDAGLSFLSLPESVRYN FDGAPRGELVGREFQAQVDGRASVVRAEFTNRAGRRWTVLMDPDDTDDGVVVPRPPPGFEDRTFDFDGVLQATRAKLQVE ALRVRGLDRRVGQGPSRLVASEGLGAERLADLTDAVATLSVGRPEVTWRHPEADGQRLARGSAVRVSVSGFRLGTGSGGE GQVRVSMRGGSGCNDQALFASAPIAPGRGEVELQLPAQCSGLGVSLVATLVDLEGDPLRPLVTATRQVDIP
Sequences:
>Translated_871_residues MSHPPRPLALACLACVLLYLSGCGDMDMGPDNPVGPFPQVTYCSVDQDCPDPSLFFCDSATSRCEPACLTREDCGVARRG PHALAACDEVGGAGCQCDMNRCVPVVCAADTDCDSGTVCRDGACGSPPSESRAVACEVTPDVVVGTPGMTVDFRVWVRES TGAPLVLRDGVAWEVLSPSVVGGGGGHQASVVLSEPASEHQALAVRVGNVSCHARVTVLPAEVAPGGVRVLVVDALTGRP VPLAVVAVSADDGGLEAAMVTNADGAVWVPAEGEVALSAFHSDYGYLTLARHDASQFRDVRMALRRNPLDRFGGVKGPFP TLTETFSTAVSLRVGLMGLSVPGLPTDLAPESFLGPEHEVALPVGTGQDRLSLPSGSALWLTGSTAPDVAAPGVAGVCDS SLPGVLDAELAIRTGACGTRTAWALTGELPLKELPLNLMAPGTDPLLQLGQLLPGSTRFFSALSRDARFTLAPTPGILTG EPDTRAAEYAQALPFERETPGVRLSFPFAVRVPPLPQYRGAHLDRAYVLATVAVPGRGMVPLGLGAAANVAPADPNTDAD ARLGRPGLVPVRMAPTHRGLEGLPYRLVVSATSGDQAEDGTVATSTLVANLPRPEFDPDGVQPVDAGLSFLSLPESVRYN FDGAPRGELVGREFQAQVDGRASVVRAEFTNRAGRRWTVLMDPDDTDDGVVVPRPPPGFEDRTFDFDGVLQATRAKLQVE ALRVRGLDRRVGQGPSRLVASEGLGAERLADLTDAVATLSVGRPEVTWRHPEADGQRLARGSAVRVSVSGFRLGTGSGGE GQVRVSMRGGSGCNDQALFASAPIAPGRGEVELQLPAQCSGLGVSLVATLVDLEGDPLRPLVTATRQVDIP >Mature_870_residues SHPPRPLALACLACVLLYLSGCGDMDMGPDNPVGPFPQVTYCSVDQDCPDPSLFFCDSATSRCEPACLTREDCGVARRGP HALAACDEVGGAGCQCDMNRCVPVVCAADTDCDSGTVCRDGACGSPPSESRAVACEVTPDVVVGTPGMTVDFRVWVREST GAPLVLRDGVAWEVLSPSVVGGGGGHQASVVLSEPASEHQALAVRVGNVSCHARVTVLPAEVAPGGVRVLVVDALTGRPV PLAVVAVSADDGGLEAAMVTNADGAVWVPAEGEVALSAFHSDYGYLTLARHDASQFRDVRMALRRNPLDRFGGVKGPFPT LTETFSTAVSLRVGLMGLSVPGLPTDLAPESFLGPEHEVALPVGTGQDRLSLPSGSALWLTGSTAPDVAAPGVAGVCDSS LPGVLDAELAIRTGACGTRTAWALTGELPLKELPLNLMAPGTDPLLQLGQLLPGSTRFFSALSRDARFTLAPTPGILTGE PDTRAAEYAQALPFERETPGVRLSFPFAVRVPPLPQYRGAHLDRAYVLATVAVPGRGMVPLGLGAAANVAPADPNTDADA RLGRPGLVPVRMAPTHRGLEGLPYRLVVSATSGDQAEDGTVATSTLVANLPRPEFDPDGVQPVDAGLSFLSLPESVRYNF DGAPRGELVGREFQAQVDGRASVVRAEFTNRAGRRWTVLMDPDDTDDGVVVPRPPPGFEDRTFDFDGVLQATRAKLQVEA LRVRGLDRRVGQGPSRLVASEGLGAERLADLTDAVATLSVGRPEVTWRHPEADGQRLARGSAVRVSVSGFRLGTGSGGEG QVRVSMRGGSGCNDQALFASAPIAPGRGEVELQLPAQCSGLGVSLVATLVDLEGDPLRPLVTATRQVDIP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 90605; Mature: 90474
Theoretical pI: Translated: 4.65; Mature: 4.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHPPRPLALACLACVLLYLSGCGDMDMGPDNPVGPFPQVTYCSVDQDCPDPSLFFCDSA CCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEECCC TSRCEPACLTREDCGVARRGPHALAACDEVGGAGCQCDMNRCVPVVCAADTDCDSGTVCR CCCCCCCCCCHHHCCCCCCCCHHHHHHHHCCCCCCEECCCCCEEEEEECCCCCCCCCEEC DGACGSPPSESRAVACEVTPDVVVGTPGMTVDFRVWVRESTGAPLVLRDGVAWEVLSPSV CCCCCCCCCCCCEEEEEECCCEEECCCCCEEEEEEEEEECCCCCEEEECCCEEEECCCEE VGGGGGHQASVVLSEPASEHQALAVRVGNVSCHARVTVLPAEVAPGGVRVLVVDALTGRP ECCCCCCEEEEEEECCCCCCEEEEEEECCEEEEEEEEEEECCCCCCCEEEEEEEECCCCC VPLAVVAVSADDGGLEAAMVTNADGAVWVPAEGEVALSAFHSDYGYLTLARHDASQFRDV CEEEEEEEECCCCCEEEEEEECCCCCEEECCCCCEEEEEEECCCCEEEEEECCHHHHHHH RMALRRNPLDRFGGVKGPFPTLTETFSTAVSLRVGLMGLSVPGLPTDLAPESFLGPEHEV HHHHHCCCHHHHCCCCCCCCHHHHHHHHHHHEEEEEEEECCCCCCCCCCCHHHCCCCCEE ALPVGTGQDRLSLPSGSALWLTGSTAPDVAAPGVAGVCDSSLPGVLDAELAIRTGACGTR EEEECCCCCCEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCEECEEEEEECCCCCC TAWALTGELPLKELPLNLMAPGTDPLLQLGQLLPGSTRFFSALSRDARFTLAPTPGILTG EEEEEECCCCHHHCCCEEECCCCCHHHHHHHHCCCCHHHHHHHCCCCEEEECCCCCEEEC EPDTRAAEYAQALPFERETPGVRLSFPFAVRVPPLPQYRGAHLDRAYVLATVAVPGRGMV CCCCHHHHHHHHCCCCCCCCCEEEECCEEEECCCCCCCCCCCCCCEEEEEEEECCCCCCE PLGLGAAANVAPADPNTDADARLGRPGLVPVRMAPTHRGLEGLPYRLVVSATSGDQAEDG EECCCCCCCCCCCCCCCCCCHHCCCCCEEEEEECCCCCCCCCCCEEEEEEECCCCCCCCC TVATSTLVANLPRPEFDPDGVQPVDAGLSFLSLPESVRYNFDGAPRGELVGREFQAQVDG EEEEHHHEECCCCCCCCCCCCCHHHHCCHHHCCCHHHEECCCCCCCCCCCCCHHHCCCCC RASVVRAEFTNRAGRRWTVLMDPDDTDDGVVVPRPPPGFEDRTFDFDGVLQATRAKLQVE CEEEEEEHHHCCCCCEEEEEECCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHEEE ALRVRGLDRRVGQGPSRLVASEGLGAERLADLTDAVATLSVGRPEVTWRHPEADGQRLAR EHHHCCCHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHC GSAVRVSVSGFRLGTGSGGEGQVRVSMRGGSGCNDQALFASAPIAPGRGEVELQLPAQCS CCEEEEEECCEEEECCCCCCCEEEEEECCCCCCCCCEEEEECCCCCCCCCEEEECCCCCC GLGVSLVATLVDLEGDPLRPLVTATRQVDIP CCCHHHHHHHHHCCCCCCCHHHHHCEEECCC >Mature Secondary Structure SHPPRPLALACLACVLLYLSGCGDMDMGPDNPVGPFPQVTYCSVDQDCPDPSLFFCDSA CCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEECCC TSRCEPACLTREDCGVARRGPHALAACDEVGGAGCQCDMNRCVPVVCAADTDCDSGTVCR CCCCCCCCCCHHHCCCCCCCCHHHHHHHHCCCCCCEECCCCCEEEEEECCCCCCCCCEEC DGACGSPPSESRAVACEVTPDVVVGTPGMTVDFRVWVRESTGAPLVLRDGVAWEVLSPSV CCCCCCCCCCCCEEEEEECCCEEECCCCCEEEEEEEEEECCCCCEEEECCCEEEECCCEE VGGGGGHQASVVLSEPASEHQALAVRVGNVSCHARVTVLPAEVAPGGVRVLVVDALTGRP ECCCCCCEEEEEEECCCCCCEEEEEEECCEEEEEEEEEEECCCCCCCEEEEEEEECCCCC VPLAVVAVSADDGGLEAAMVTNADGAVWVPAEGEVALSAFHSDYGYLTLARHDASQFRDV CEEEEEEEECCCCCEEEEEEECCCCCEEECCCCCEEEEEEECCCCEEEEEECCHHHHHHH RMALRRNPLDRFGGVKGPFPTLTETFSTAVSLRVGLMGLSVPGLPTDLAPESFLGPEHEV HHHHHCCCHHHHCCCCCCCCHHHHHHHHHHHEEEEEEEECCCCCCCCCCCHHHCCCCCEE ALPVGTGQDRLSLPSGSALWLTGSTAPDVAAPGVAGVCDSSLPGVLDAELAIRTGACGTR EEEECCCCCCEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCEECEEEEEECCCCCC TAWALTGELPLKELPLNLMAPGTDPLLQLGQLLPGSTRFFSALSRDARFTLAPTPGILTG EEEEEECCCCHHHCCCEEECCCCCHHHHHHHHCCCCHHHHHHHCCCCEEEECCCCCEEEC EPDTRAAEYAQALPFERETPGVRLSFPFAVRVPPLPQYRGAHLDRAYVLATVAVPGRGMV CCCCHHHHHHHHCCCCCCCCCEEEECCEEEECCCCCCCCCCCCCCEEEEEEEECCCCCCE PLGLGAAANVAPADPNTDADARLGRPGLVPVRMAPTHRGLEGLPYRLVVSATSGDQAEDG EECCCCCCCCCCCCCCCCCCHHCCCCCEEEEEECCCCCCCCCCCEEEEEEECCCCCCCCC TVATSTLVANLPRPEFDPDGVQPVDAGLSFLSLPESVRYNFDGAPRGELVGREFQAQVDG EEEEHHHEECCCCCCCCCCCCCHHHHCCHHHCCCHHHEECCCCCCCCCCCCCHHHCCCCC RASVVRAEFTNRAGRRWTVLMDPDDTDDGVVVPRPPPGFEDRTFDFDGVLQATRAKLQVE CEEEEEEHHHCCCCCEEEEEECCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHEEE ALRVRGLDRRVGQGPSRLVASEGLGAERLADLTDAVATLSVGRPEVTWRHPEADGQRLAR EHHHCCCHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHC GSAVRVSVSGFRLGTGSGGEGQVRVSMRGGSGCNDQALFASAPIAPGRGEVELQLPAQCS CCEEEEEECCEEEECCCCCCCEEEEEECCCCCCCCCEEEEECCCCCCCCCEEEECCCCCC GLGVSLVATLVDLEGDPLRPLVTATRQVDIP CCCHHHHHHHHHCCCCCCCHHHHHCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA