| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is ygjT [C]
Identifier: 108758817
GI number: 108758817
Start: 1804118
End: 1805068
Strand: Direct
Name: ygjT [C]
Synonym: MXAN_1535
Alternate gene names: 108758817
Gene position: 1804118-1805068 (Clockwise)
Preceding gene: 108757366
Following gene: 108757984
Centisome position: 19.74
GC content: 64.77
Gene sequence:
>951_bases GTGAACACGCAAGTCGCGCTCTGGGTGGGTTTCAACGTCTTCGTCCTCGCGATGCTCGCGCTGGACCTCGGGCTGTTCCA TCGCAAGGACCATGCGGTGACGCCGAAGGAGGCGGGCCTCTGGACGCTGGTGTGGATTACCCTCAGCCTGATTTTCTGCG CGGGCATCTGGCACTACCAGGGGCCCACCGTGGGGCTCCAGTGGTTGACGGCGTACGTGGTGGAGTACGCGCTCTCCGTC GACAACCTCTTCGTCTTCCTGATGGTGTTCAGCTACTTCCGGGTGGCGCCCGAGCACCAGCACCGGGTGCTCTTCTGGGG CATCCTGGGCGCGTTCGTCATGCGCGCTGGCCTCATCATCGCCGGCACGGCGCTGGTGAAGCAGTTCCACTGGCTCATCT ACCTGTTCGGCGCGTTCCTCGTCTTCACCGCGGTGAAGATGCTGGTGTCCAAGGACGAGGAGATGGACCCGGAGCAGCAG GGCATCGTGAAGTTCGCGCGCCGGGTGCTGCCGGTGGCCCGGCTGGGTGAAGGCAGCCGCTTCATGGTGCAGGAGGACGG CCGCAGCAAGTTCACGCCGCTGTTCATCGTGCTGCTGGTGGTGGAGGCCACGGACCTGCTCTTCGCGCTGGACTCCATCC CCGCGGTGCTGGGCATCAGCCAGGACGCCTTCATCATCTACACGTCCAACGTGTGCGCCATTCTGGGCCTGCGCTCGCTG TTCTTCGTCGTGGCCAGCCTGATGGAGAAGTTCCACTTCCTGAAGGTGGGCCTGAGCGCCATCCTGGGCTTCGTGGGCGT GAAGATGCTCATCACCTTCTTCGACATCCACGTCCCCATCGGCATCTCCCTGGGCGTGATTGCCGGCGTGCTGGTGGCGG CCATCGTCGCCTCGCTGGTGTGGCCGAAGCAGCCGGAGCCCGGACAGGACCGGGAAAGCGCGAAGACGTAG
Upstream 100 bases:
>100_bases GACGAAAGCAGGAGGTCCAGCGGGTTTCACGCGAGGGGTCGACGCCCGGGCAGCCCGCCGGTAGGGTGCGCCCCGTCATA CCCTGCAACAGGATTGCTAC
Downstream 100 bases:
>100_bases GCAGGGCGCCGGGGCTTCCAACCCGGCGTTTTCCTTGCAAGTGGGCGCCGTTGCCGCCAAATCTGGGGGCATGTCCTCCA GCGCCATCACCGACGGCATC
Product: TerC family membrane protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 316; Mature: 316
Protein sequence:
>316_residues MNTQVALWVGFNVFVLAMLALDLGLFHRKDHAVTPKEAGLWTLVWITLSLIFCAGIWHYQGPTVGLQWLTAYVVEYALSV DNLFVFLMVFSYFRVAPEHQHRVLFWGILGAFVMRAGLIIAGTALVKQFHWLIYLFGAFLVFTAVKMLVSKDEEMDPEQQ GIVKFARRVLPVARLGEGSRFMVQEDGRSKFTPLFIVLLVVEATDLLFALDSIPAVLGISQDAFIIYTSNVCAILGLRSL FFVVASLMEKFHFLKVGLSAILGFVGVKMLITFFDIHVPIGISLGVIAGVLVAAIVASLVWPKQPEPGQDRESAKT
Sequences:
>Translated_316_residues MNTQVALWVGFNVFVLAMLALDLGLFHRKDHAVTPKEAGLWTLVWITLSLIFCAGIWHYQGPTVGLQWLTAYVVEYALSV DNLFVFLMVFSYFRVAPEHQHRVLFWGILGAFVMRAGLIIAGTALVKQFHWLIYLFGAFLVFTAVKMLVSKDEEMDPEQQ GIVKFARRVLPVARLGEGSRFMVQEDGRSKFTPLFIVLLVVEATDLLFALDSIPAVLGISQDAFIIYTSNVCAILGLRSL FFVVASLMEKFHFLKVGLSAILGFVGVKMLITFFDIHVPIGISLGVIAGVLVAAIVASLVWPKQPEPGQDRESAKT >Mature_316_residues MNTQVALWVGFNVFVLAMLALDLGLFHRKDHAVTPKEAGLWTLVWITLSLIFCAGIWHYQGPTVGLQWLTAYVVEYALSV DNLFVFLMVFSYFRVAPEHQHRVLFWGILGAFVMRAGLIIAGTALVKQFHWLIYLFGAFLVFTAVKMLVSKDEEMDPEQQ GIVKFARRVLPVARLGEGSRFMVQEDGRSKFTPLFIVLLVVEATDLLFALDSIPAVLGISQDAFIIYTSNVCAILGLRSL FFVVASLMEKFHFLKVGLSAILGFVGVKMLITFFDIHVPIGISLGVIAGVLVAAIVASLVWPKQPEPGQDRESAKT
Specific function: Unknown
COG id: COG0861
COG function: function code P; Membrane protein TerC, possibly involved in tellurium resistance
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the terC family [H]
Homologues:
Organism=Escherichia coli, GI48994922, Length=295, Percent_Identity=46.7796610169492, Blast_Score=251, Evalue=4e-68,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005496 - InterPro: IPR022369 [H]
Pfam domain/function: PF03741 TerC [H]
EC number: NA
Molecular weight: Translated: 35110; Mature: 35110
Theoretical pI: Translated: 7.73; Mature: 7.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTQVALWVGFNVFVLAMLALDLGLFHRKDHAVTPKEAGLWTLVWITLSLIFCAGIWHYQ CCCCEEEEECHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC GPTVGLQWLTAYVVEYALSVDNLFVFLMVFSYFRVAPEHQHRVLFWGILGAFVMRAGLII CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH AGTALVKQFHWLIYLFGAFLVFTAVKMLVSKDEEMDPEQQGIVKFARRVLPVARLGEGSR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCE FMVQEDGRSKFTPLFIVLLVVEATDLLFALDSIPAVLGISQDAFIIYTSNVCAILGLRSL EEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHH FFVVASLMEKFHFLKVGLSAILGFVGVKMLITFFDIHVPIGISLGVIAGVLVAAIVASLV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH WPKQPEPGQDRESAKT CCCCCCCCCCCCCCCC >Mature Secondary Structure MNTQVALWVGFNVFVLAMLALDLGLFHRKDHAVTPKEAGLWTLVWITLSLIFCAGIWHYQ CCCCEEEEECHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC GPTVGLQWLTAYVVEYALSVDNLFVFLMVFSYFRVAPEHQHRVLFWGILGAFVMRAGLII CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH AGTALVKQFHWLIYLFGAFLVFTAVKMLVSKDEEMDPEQQGIVKFARRVLPVARLGEGSR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCE FMVQEDGRSKFTPLFIVLLVVEATDLLFALDSIPAVLGISQDAFIIYTSNVCAILGLRSL EEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHH FFVVASLMEKFHFLKVGLSAILGFVGVKMLITFFDIHVPIGISLGVIAGVLVAAIVASLV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH WPKQPEPGQDRESAKT CCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA