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The map label for this gene is rpiB [H]

Identifier: 108758725

GI number: 108758725

Start: 5968149

End: 5968592

Strand: Reverse

Name: rpiB [H]

Synonym: MXAN_4767

Alternate gene names: 108758725

Gene position: 5968592-5968149 (Counterclockwise)

Preceding gene: 108761812

Following gene: 108762445

Centisome position: 65.3

GC content: 70.72

Gene sequence:

>444_bases
GTGAAAGTCATCCTCGCTTCAGACCACGCGGGACTGGAGCTCCGGCAGGAGCTGGTGGCCGCGCTCACCGCGCGGGGCGT
GGCCCACGAAGACGTGGGTCCCGTCACGCGGGACTCGGTGGACTACCCGGACTTCGCCGCGCGGGTGTCCCGCGCCGTGA
CGTCCGGGGAGGCCACCCTGGGCGTGCTGGTGTGTGGCACCGGCATTGGCATGAGCATCGTCGCCAACAAGCACAAGGGC
ATCCGGGCGGCCCTGTGCACCACGGAGTTCGAGGCCCGGATGGCTCGGGCCCACAATGACGCCAACGTGCTGTGCCTGGG
CCAGCGCGTGGTGGGGGCCGGCGTGGGCCGCGCCATCCTGGAGGCGTTCCTCAGCACTGCTTTCGAAGGCGGCCGCCACG
AGCGGCGCGTCCAGATGATTCGCGAGGCCGAGTCCCAGGGCTAA

Upstream 100 bases:

>100_bases
AGGCCCGGGTGGACGCGGTGATGAGCAACTCGTTTGGCTTCGGCGGCACCAACGCCGTGCTGGTGTTCAAGCGCTTCTAG
CTGTCTCAGGAGAAACCCGC

Downstream 100 bases:

>100_bases
CGGCCCCGCCGTACCCGTCGTTCGAGGGAGTCCGCCATGGAGAACATCCGTACGCTGGCCGAAGTGGACCCGGAGATTGC
CCGCGTCCTCCGCGAGGAGA

Product: ribose 5-phosphate isomerase B

Products: D-ribulose 5-phosphate

Alternate protein names: NA

Number of amino acids: Translated: 147; Mature: 147

Protein sequence:

>147_residues
MKVILASDHAGLELRQELVAALTARGVAHEDVGPVTRDSVDYPDFAARVSRAVTSGEATLGVLVCGTGIGMSIVANKHKG
IRAALCTTEFEARMARAHNDANVLCLGQRVVGAGVGRAILEAFLSTAFEGGRHERRVQMIREAESQG

Sequences:

>Translated_147_residues
MKVILASDHAGLELRQELVAALTARGVAHEDVGPVTRDSVDYPDFAARVSRAVTSGEATLGVLVCGTGIGMSIVANKHKG
IRAALCTTEFEARMARAHNDANVLCLGQRVVGAGVGRAILEAFLSTAFEGGRHERRVQMIREAESQG
>Mature_147_residues
MKVILASDHAGLELRQELVAALTARGVAHEDVGPVTRDSVDYPDFAARVSRAVTSGEATLGVLVCGTGIGMSIVANKHKG
IRAALCTTEFEARMARAHNDANVLCLGQRVVGAGVGRAILEAFLSTAFEGGRHERRVQMIREAESQG

Specific function: In Addition To Its Activity On D-Ribose 5-Phosphate It Probably Also Has Activity On D-Allose 6-Phosphate. [C]

COG id: COG0698

COG function: function code G; Ribose 5-phosphate isomerase RpiB

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the lacAB/rpiB family [H]

Homologues:

Organism=Escherichia coli, GI1790528, Length=145, Percent_Identity=44.8275862068966, Blast_Score=139, Evalue=1e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003500
- InterPro:   IPR004785 [H]

Pfam domain/function: PF02502 LacAB_rpiB [H]

EC number: 5.3.1.6

Molecular weight: Translated: 15539; Mature: 15539

Theoretical pI: Translated: 7.56; Mature: 7.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVILASDHAGLELRQELVAALTARGVAHEDVGPVTRDSVDYPDFAARVSRAVTSGEATL
CEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEE
GVLVCGTGIGMSIVANKHKGIRAALCTTEFEARMARAHNDANVLCLGQRVVGAGVGRAIL
EEEEECCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCEEEECCHHHHCHHHHHHH
EAFLSTAFEGGRHERRVQMIREAESQG
HHHHHHHHCCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKVILASDHAGLELRQELVAALTARGVAHEDVGPVTRDSVDYPDFAARVSRAVTSGEATL
CEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEE
GVLVCGTGIGMSIVANKHKGIRAALCTTEFEARMARAHNDANVLCLGQRVVGAGVGRAIL
EEEEECCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCEEEECCHHHHCHHHHHHH
EAFLSTAFEGGRHERRVQMIREAESQG
HHHHHHHHCCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): 4.4 {D-ribose} 0.83 {D-ribose} [C]

Substrates: D-ribose 5-phosphate

Specific reaction: D-ribose 5-phosphate = D-ribulose 5-phosphate

General reaction: Intramolecular oxidoreduction; Isomerization [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]