| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is ubiE [H]
Identifier: 108758697
GI number: 108758697
Start: 249306
End: 249956
Strand: Reverse
Name: ubiE [H]
Synonym: MXAN_0204
Alternate gene names: 108758697
Gene position: 249956-249306 (Counterclockwise)
Preceding gene: 108759701
Following gene: 108759632
Centisome position: 2.73
GC content: 74.19
Gene sequence:
>651_bases ATGGGCCCGGAGTTCCGGCGCATCCGCGGCGGGCTTCCGGGCCCGCGCGTTTCTGACGAGGAGGCTGCTTCCATGAAGGC ACTCGCGTACGACGCAGTCATGACGCCCCTGGGCTGGCTGGGCCTCACCGCCGCCCGGCGCAAGCTGGTGCGCGGCCTGT CCGGCCACGTGCTGGAGGTGGGCACCGGCACCGGCCTGGCGTTGCCCGGCTACCCGGACACCGTCACCGCCGTCACCGCC ATCGACGTGGACGAAGCGGCGCTCGCGCGCGCCCAGCGACGGCGGCCCGACGCGCGGCTGCTGTATGCCAGCGTGGAGTC CCTGCCCTTCCCCACCGCCTCCTTCGACGCCGTGGTGTCCAGCCTCGTCTTCTGCAGCGTGGAGGCCCCGGCGCAGGCGC TGACGGAGATTTTCCGGGTCCTGCGCCCGGGCGGCGCGCTGCGCATGCTGGAGCATGTGCGCGCGCCCTCGCCAGCGCTG GCCACCGTGCAGGACTTGCTCACCCCCGCCTGGATGCGGGTGAGCGGCGGGTGCCGGCTGGACCGGGAGACGTTCGACCT GGTGCGGCGCGCGGGCTTCGACATCGAGCGGCGCGTGCAGCGGCTCCAGGGCGTGAGCGAGCTCATCATCGCCCGGCGCC CGGCGAGCTGA
Upstream 100 bases:
>100_bases GCCTCCTCGCCGCCGCCGTCGTCGCCGAAGAGCCCGGGAACGGTAGGCGTGCGGTAGGGTCGCAACGTCCGCTGCCCTTC TCGCGGCAGCCTGGCGTTTC
Downstream 100 bases:
>100_bases CGCGCCGCCGGAGCGCTCAGGCGGGCACGGGCATGCGCAGCCCGGCGAGCTTGCGGTCCGTGAGGATGGAGTGGACCTGT GTGATTCGCCCGTCCGCCCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 216; Mature: 215
Protein sequence:
>216_residues MGPEFRRIRGGLPGPRVSDEEAASMKALAYDAVMTPLGWLGLTAARRKLVRGLSGHVLEVGTGTGLALPGYPDTVTAVTA IDVDEAALARAQRRRPDARLLYASVESLPFPTASFDAVVSSLVFCSVEAPAQALTEIFRVLRPGGALRMLEHVRAPSPAL ATVQDLLTPAWMRVSGGCRLDRETFDLVRRAGFDIERRVQRLQGVSELIIARRPAS
Sequences:
>Translated_216_residues MGPEFRRIRGGLPGPRVSDEEAASMKALAYDAVMTPLGWLGLTAARRKLVRGLSGHVLEVGTGTGLALPGYPDTVTAVTA IDVDEAALARAQRRRPDARLLYASVESLPFPTASFDAVVSSLVFCSVEAPAQALTEIFRVLRPGGALRMLEHVRAPSPAL ATVQDLLTPAWMRVSGGCRLDRETFDLVRRAGFDIERRVQRLQGVSELIIARRPAS >Mature_215_residues GPEFRRIRGGLPGPRVSDEEAASMKALAYDAVMTPLGWLGLTAARRKLVRGLSGHVLEVGTGTGLALPGYPDTVTAVTAI DVDEAALARAQRRRPDARLLYASVESLPFPTASFDAVVSSLVFCSVEAPAQALTEIFRVLRPGGALRMLEHVRAPSPALA TVQDLLTPAWMRVSGGCRLDRETFDLVRRAGFDIERRVQRLQGVSELIIARRPAS
Specific function: Methyltransferase required for the conversion of dimethylmenaquinone (DMKH2) to menaquinone (MKH2) [H]
COG id: COG0500
COG function: function code QR; SAM-dependent methyltransferases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the methyltransferase superfamily. UbiE family [H]
Homologues:
Organism=Homo sapiens, GI164663805, Length=178, Percent_Identity=34.8314606741573, Blast_Score=86, Evalue=2e-17, Organism=Homo sapiens, GI89145417, Length=156, Percent_Identity=36.5384615384615, Blast_Score=83, Evalue=2e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004033 [H]
Pfam domain/function: PF01209 Ubie_methyltran [H]
EC number: 2.1.1.-
Molecular weight: Translated: 23314; Mature: 23183
Theoretical pI: Translated: 10.15; Mature: 10.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGPEFRRIRGGLPGPRVSDEEAASMKALAYDAVMTPLGWLGLTAARRKLVRGLSGHVLEV CCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEE GTGTGLALPGYPDTVTAVTAIDVDEAALARAQRRRPDARLLYASVESLPFPTASFDAVVS CCCCCEECCCCCCHHHEEEEECCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHH SLVFCSVEAPAQALTEIFRVLRPGGALRMLEHVRAPSPALATVQDLLTPAWMRVSGGCRL HHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCC DRETFDLVRRAGFDIERRVQRLQGVSELIIARRPAS CHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure GPEFRRIRGGLPGPRVSDEEAASMKALAYDAVMTPLGWLGLTAARRKLVRGLSGHVLEV CCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEE GTGTGLALPGYPDTVTAVTAIDVDEAALARAQRRRPDARLLYASVESLPFPTASFDAVVS CCCCCEECCCCCCHHHEEEEECCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHH SLVFCSVEAPAQALTEIFRVLRPGGALRMLEHVRAPSPALATVQDLLTPAWMRVSGGCRL HHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCC DRETFDLVRRAGFDIERRVQRLQGVSELIIARRPAS CHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA