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The map label for this gene is ycdJ [C]

Identifier: 108759632

GI number: 108759632

Start: 245784

End: 246728

Strand: Reverse

Name: ycdJ [C]

Synonym: MXAN_0201

Alternate gene names: 108759632

Gene position: 246728-245784 (Counterclockwise)

Preceding gene: 108758697

Following gene: 108762537

Centisome position: 2.7

GC content: 68.99

Gene sequence:

>945_bases
ATGAGAAAGCTCCTCGCCGCCCTGCTCGCTCTTCCCGTTCTCACCGCCTGTGGTCCCGCGCCGGAGTCCGACTCGAATGA
CATGCGGCTGGCACCCGAGGGCGCCGAGGTGGCCTCCACCGAGCAGGAGCTGTTCGGCACGCCCCGTGAGCGCTCCGTCC
GCCTGCGCACCGGCGTGACGCTGCGCTACGTGGAGCAAGGCCTGCCGCTGGGCCCCGCAGTGGTGTTCCTCCACGGCTTT
TCGGATTCCAACCACACGTGGGACCTGAACCTGCGCACCTTCCCGCGCAACCACCACGTCTACGTGCTGGACCAGCGCGG
CCACGGGGATTCGACGCGCCCGGCGTGCTGCTACACGCAGCAGTCCTTCGCCGCGGACGTGGACGCCTTCCTGGAAGCGG
TGGGCGAGCGCAGCGCCATCCTCGTCGGCCACTCCATGGGCAGCTTCATCGCGCAGCAGGTGGCGTTGGACTTCCCGCGG
CGCGTGAAGGGATTGGTGCTCGTCGGCTCGGCACCCACCGTCGCCGGCAACCCGGTGGCGCTGGAGCTGAAGTCCATCGT
GGACACGTTCGAGGGCACGGTGGATCCGGAGTTCATCCGCGCGTTCCAGGAGAGCACCTTCGTGCGCCCTGTTCCGGCGT
CGTACATCAACACGATGGTGTCGGAGAGCAGCAAGGTGCCCGCGCGCGTGTGGCAGGACGCGCTGGACGGCCTGCTCGCG
GAGGACCACTCGGCGCGGCTGAACCACATCCGCGTGCCGGTGCTCGTCATTGGCGGAGACCAGGACGGCTTCTTCTCCGT
CGCTGACCAGCAGGCGCTGGTGGACGCCCTGCCGGACGCCGAGTTCAAGCTGTACCCGAACACCGGCCATGCGCCCCACG
CGGAGCAGCCGCGGCGCTTCAACCAGGACGTGCACCGCTTCCTGCGCGAAGTGACGCGCTGGTAG

Upstream 100 bases:

>100_bases
ACCCCGCAAGTCACCTACAGCGAGGCAATGTCAGAGGTAGTCGTAGACTTCTCCATGCACCGGCGGACTTTCCCGCCGGA
GAGCCTCGAGGCATTCACGC

Downstream 100 bases:

>100_bases
GAGGAGGAAGTCGCGTGCCCGGGATTAACCGGGCACCGCCCCCGGAGCACCGCCTCCCGCGGGCGGCTCCGGGGAGGCGC
GGGGCACATCGGCGCGGGCC

Product: alpha/beta fold family hydrolase

Products: NA

Alternate protein names: Atropine acylhydrolase; Atropinesterase [H]

Number of amino acids: Translated: 314; Mature: 314

Protein sequence:

>314_residues
MRKLLAALLALPVLTACGPAPESDSNDMRLAPEGAEVASTEQELFGTPRERSVRLRTGVTLRYVEQGLPLGPAVVFLHGF
SDSNHTWDLNLRTFPRNHHVYVLDQRGHGDSTRPACCYTQQSFAADVDAFLEAVGERSAILVGHSMGSFIAQQVALDFPR
RVKGLVLVGSAPTVAGNPVALELKSIVDTFEGTVDPEFIRAFQESTFVRPVPASYINTMVSESSKVPARVWQDALDGLLA
EDHSARLNHIRVPVLVIGGDQDGFFSVADQQALVDALPDAEFKLYPNTGHAPHAEQPRRFNQDVHRFLREVTRW

Sequences:

>Translated_314_residues
MRKLLAALLALPVLTACGPAPESDSNDMRLAPEGAEVASTEQELFGTPRERSVRLRTGVTLRYVEQGLPLGPAVVFLHGF
SDSNHTWDLNLRTFPRNHHVYVLDQRGHGDSTRPACCYTQQSFAADVDAFLEAVGERSAILVGHSMGSFIAQQVALDFPR
RVKGLVLVGSAPTVAGNPVALELKSIVDTFEGTVDPEFIRAFQESTFVRPVPASYINTMVSESSKVPARVWQDALDGLLA
EDHSARLNHIRVPVLVIGGDQDGFFSVADQQALVDALPDAEFKLYPNTGHAPHAEQPRRFNQDVHRFLREVTRW
>Mature_314_residues
MRKLLAALLALPVLTACGPAPESDSNDMRLAPEGAEVASTEQELFGTPRERSVRLRTGVTLRYVEQGLPLGPAVVFLHGF
SDSNHTWDLNLRTFPRNHHVYVLDQRGHGDSTRPACCYTQQSFAADVDAFLEAVGERSAILVGHSMGSFIAQQVALDFPR
RVKGLVLVGSAPTVAGNPVALELKSIVDTFEGTVDPEFIRAFQESTFVRPVPASYINTMVSESSKVPARVWQDALDGLLA
EDHSARLNHIRVPVLVIGGDQDGFFSVADQQALVDALPDAEFKLYPNTGHAPHAEQPRRFNQDVHRFLREVTRW

Specific function: Alkaloid degradation [H]

COG id: COG0596

COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dmpD/todF/xylF esterase family [H]

Homologues:

Organism=Homo sapiens, GI218777840, Length=284, Percent_Identity=23.2394366197183, Blast_Score=81, Evalue=1e-15,
Organism=Homo sapiens, GI13376164, Length=284, Percent_Identity=23.2394366197183, Blast_Score=81, Evalue=1e-15,
Organism=Homo sapiens, GI218777837, Length=291, Percent_Identity=23.3676975945017, Blast_Score=81, Evalue=2e-15,
Organism=Homo sapiens, GI145611434, Length=239, Percent_Identity=24.6861924686192, Blast_Score=72, Evalue=9e-13,
Organism=Homo sapiens, GI27597073, Length=137, Percent_Identity=29.1970802919708, Blast_Score=70, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000073 [H]

Pfam domain/function: PF00561 Abhydrolase_1 [H]

EC number: =3.1.1.10 [H]

Molecular weight: Translated: 34530; Mature: 34530

Theoretical pI: Translated: 5.95; Mature: 5.95

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKLLAALLALPVLTACGPAPESDSNDMRLAPEGAEVASTEQELFGTPRERSVRLRTGVT
CHHHHHHHHHHHHHHHCCCCCCCCCCCCEECCCCCHHHCCHHHHCCCCCCCCEEEECCCE
LRYVEQGLPLGPAVVFLHGFSDSNHTWDLNLRTFPRNHHVYVLDQRGHGDSTRPACCYTQ
EEHHHCCCCCCCEEEEEECCCCCCCEEEEEEEECCCCCEEEEEECCCCCCCCCCEEEECC
QSFAADVDAFLEAVGERSAILVGHSMGSFIAQQVALDFPRRVKGLVLVGSAPTVAGNPVA
HHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHCCCHHCCCEEEECCCCCCCCCCCE
LELKSIVDTFEGTVDPEFIRAFQESTFVRPVPASYINTMVSESSKVPARVWQDALDGLLA
EHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHH
EDHSARLNHIRVPVLVIGGDQDGFFSVADQQALVDALPDAEFKLYPNTGHAPHAEQPRRF
CCCCCCCCEEEEEEEEEECCCCCCEEHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCHHH
NQDVHRFLREVTRW
HHHHHHHHHHHHCC
>Mature Secondary Structure
MRKLLAALLALPVLTACGPAPESDSNDMRLAPEGAEVASTEQELFGTPRERSVRLRTGVT
CHHHHHHHHHHHHHHHCCCCCCCCCCCCEECCCCCHHHCCHHHHCCCCCCCCEEEECCCE
LRYVEQGLPLGPAVVFLHGFSDSNHTWDLNLRTFPRNHHVYVLDQRGHGDSTRPACCYTQ
EEHHHCCCCCCCEEEEEECCCCCCCEEEEEEEECCCCCEEEEEECCCCCCCCCCEEEECC
QSFAADVDAFLEAVGERSAILVGHSMGSFIAQQVALDFPRRVKGLVLVGSAPTVAGNPVA
HHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHCCCHHCCCEEEECCCCCCCCCCCE
LELKSIVDTFEGTVDPEFIRAFQESTFVRPVPASYINTMVSESSKVPARVWQDALDGLLA
EHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHH
EDHSARLNHIRVPVLVIGGDQDGFFSVADQQALVDALPDAEFKLYPNTGHAPHAEQPRRF
CCCCCCCCEEEEEEEEEECCCCCCEEHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCHHH
NQDVHRFLREVTRW
HHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA