| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
Click here to switch to the map view.
The map label for this gene is kinA [H]
Identifier: 108758532
GI number: 108758532
Start: 707603
End: 709774
Strand: Direct
Name: kinA [H]
Synonym: MXAN_0612
Alternate gene names: 108758532
Gene position: 707603-709774 (Clockwise)
Preceding gene: 108757538
Following gene: 108760215
Centisome position: 7.74
GC content: 71.59
Gene sequence:
>2172_bases GTGGCAGACGAGCAACGGGACGCGGCGGTCATGGACGCTCCCGGGAAGGCTTCAGGGACGGCTCCCGCCGACATGGCGTG TGACCTGCTCCCCCCCATGAAGTCGCAGGCGTCACACGCTGGGAGCCAGGTGGAGTCCGAGCGCTTCCGGCACCTGTCCG AGCTGCTGCACGAGGTGGTGTTCCAGCTCGACGCGCAGGGGCGGCTCGCGGTGCTGGGCGGTGCCTGGGAGCGGCTCACC GGGACGCCCGTGTCCGCGTGGCGGGGCCGCGCGCTCTTGGAGGCCATCCACCCGGAGGACCGCGAGCGCGCCCAGGCGTT GCTGGCGTACACGCCCGGCATCCCCGTTTCGCGCCAGGAAGTACGCGTGGACACGGGCGGCGGCCATGGCGTCCGTTGGG TGGAGCTGTCCGCCCGGGCCCTGGCCACCGTGCCGGGCGAGGTGATGGGGACGCTCCTGGACGTGACGTCGCGACGCACG GCGGAGGAGGCCGTCACCACCCGCGAGCGCTACCTGGACGCCATGGTGCAGGTGCAGCGGCGGATGATGGGGCACGATTT GCCGGACGACCTGTACGGCGCCGTCGTCGAGCCGTTGGGCCACGTGTCCGCCGCCAGCCGCGTCTACGTCTTCGAGATGC ACTTCGCCGAGGACGGCACGCTGCTGGCGTCGCAGCGCGCGGAGTGGTGCGCGCCGGGGATTCCTCCCAACCTGGAGGAC CCCAACATGCACGGCCTGCCCTTCGACGCGGCCCTGCGGCCCCATCAGTCCGAACAGTTGCAGCGCGGCGAGCCGGTGCA GGGCCAGCCGCGAGACTTCTCGGAGCTGCTGGCGCCCATGCTGGAGGCGCAGGGCGTCCGCTCCGTGCTGCTGCTGCCCA TGCACGTCCACGGGCAGCTCTTCGGCGTCATCGGCTTCGACAACTGCCGCGAACCCGAGTCCTGGGGCCCCATCGAGGTG AACCTGTTGTCGGGCGCGGCGGGCGCGCTGTCCCTGGCGCTGGAGCAGCGCACGGCCAACGCGCTGCGCATGCGCACGGA GACGACGCTGCGGCGCACCGAGGCCGGCGTCCACCTGCTCATCGAGGCCTTCCCGGACCCGGTGCTGGTGCACGTGGGCG ACGGCGTGCTGCTCTCCGTCAACCCGGCGCTGGTGCAGTACCTGGGCTTCCGCGACGCCTCGGAGTTGGTGGGCCGCCAC ATGCTGGACCTGGTCCGCCCCGAGGACCGGGGGGCCGCGCAGCTCCACCTGAGCCAGGCGCTGGAGGGCAAGAGCGCGGC GCGCGTGGTGGAGATGCCGCTGGTGCGCAGCGACGGCGAGGTGGTGGTGGCGGACCTGGTGACGCTGGCCGTGGTGCTGG ACGGCTCGCCCGCGCGCATCACCGTGGCGCGCGACTTCACCGAGCGCAAGCGCACCCAGGCGCAGCTCATGCTGACCGAC CGCATGGCCTCCATGGGCCTCCTGGCCGCCGGCATCGCCCACGAGCTCAACAACCCCCTGGCCTACGTGCTGTCCAACCT GGACTTCCTCCACAGCGCCGTGGGCGGCGTGCGTCCACGGATGCTCTCCCCGGAGGACATGGTGGAGCTGCGGCAGGTGC TCGACGACGCCCGTGAGGGTGCCGAGCGCATGCGCCAGATTGTCCGCCAACTGCGCGTCTTCTCCCGCGTGGAGGACGGC AAGGAAGAGTCGGTGGACGTCCACGCGGTGCTCGAATCCGTGACGCAGATGGCCGCCAGCGTGGTGCGCGCCCGCGCCCG GCTGGTGAAGGACTACGGTGAGGTGCCGTTCGTCCGTGGCAACGAGGGCAAGCTGTTCCAGGTGTTCCTCAACCTCCTCA TCAACGCCGCGCACGCCATCGAAGAGGGCGATTCGGAGGCGAACGAAATTCGCCTCACCACCCGCACGGAGGTGGGCGGC CGGGTGATGGTGGTGGTGAGCGACACGGGCCAGGGCATCCCCCCGGAGCACCTGCGCCGCATCTTCGACCCCTTCTTCAC CACCAAGTCCTCCGGCCTGGGCACCGGCCTGGGGCTGTCCATCTGTGACACGATTGTGACGGCGCTGGGCGGCCACATCT CCGTGGAGTCGTCGATAGGGGCCGGCACCACCTTCCGCGTGGCGCTCAGCGCCGCGCCGCCCAAGGCCCCGGCGAACCGG CCGGGCGCGTGA
Upstream 100 bases:
>100_bases CCACGGGAGGGGAACCGCAGGGTCTGGAATCGTTCCCGGCAGCCGTAGGTGCTGTCAGGGCTCCAGCCCCTCTCCGATGA GGCGCTAGGGAGGCCAGCAC
Downstream 100 bases:
>100_bases GCGCTGAGACGGCCGGTGTCACCTCCGGCCCTCGCGCGGACTGTAGCCCTCTCGACGGCTCGTTCTTCCGGTACTGCGCG CCCGCCCTGAAGCGTTATCC
Product: sensory box histidine kinase
Products: NA
Alternate protein names: Stage II sporulation protein F; Stage II sporulation protein J [H]
Number of amino acids: Translated: 723; Mature: 722
Protein sequence:
>723_residues MADEQRDAAVMDAPGKASGTAPADMACDLLPPMKSQASHAGSQVESERFRHLSELLHEVVFQLDAQGRLAVLGGAWERLT GTPVSAWRGRALLEAIHPEDRERAQALLAYTPGIPVSRQEVRVDTGGGHGVRWVELSARALATVPGEVMGTLLDVTSRRT AEEAVTTRERYLDAMVQVQRRMMGHDLPDDLYGAVVEPLGHVSAASRVYVFEMHFAEDGTLLASQRAEWCAPGIPPNLED PNMHGLPFDAALRPHQSEQLQRGEPVQGQPRDFSELLAPMLEAQGVRSVLLLPMHVHGQLFGVIGFDNCREPESWGPIEV NLLSGAAGALSLALEQRTANALRMRTETTLRRTEAGVHLLIEAFPDPVLVHVGDGVLLSVNPALVQYLGFRDASELVGRH MLDLVRPEDRGAAQLHLSQALEGKSAARVVEMPLVRSDGEVVVADLVTLAVVLDGSPARITVARDFTERKRTQAQLMLTD RMASMGLLAAGIAHELNNPLAYVLSNLDFLHSAVGGVRPRMLSPEDMVELRQVLDDAREGAERMRQIVRQLRVFSRVEDG KEESVDVHAVLESVTQMAASVVRARARLVKDYGEVPFVRGNEGKLFQVFLNLLINAAHAIEEGDSEANEIRLTTRTEVGG RVMVVVSDTGQGIPPEHLRRIFDPFFTTKSSGLGTGLGLSICDTIVTALGGHISVESSIGAGTTFRVALSAAPPKAPANR PGA
Sequences:
>Translated_723_residues MADEQRDAAVMDAPGKASGTAPADMACDLLPPMKSQASHAGSQVESERFRHLSELLHEVVFQLDAQGRLAVLGGAWERLT GTPVSAWRGRALLEAIHPEDRERAQALLAYTPGIPVSRQEVRVDTGGGHGVRWVELSARALATVPGEVMGTLLDVTSRRT AEEAVTTRERYLDAMVQVQRRMMGHDLPDDLYGAVVEPLGHVSAASRVYVFEMHFAEDGTLLASQRAEWCAPGIPPNLED PNMHGLPFDAALRPHQSEQLQRGEPVQGQPRDFSELLAPMLEAQGVRSVLLLPMHVHGQLFGVIGFDNCREPESWGPIEV NLLSGAAGALSLALEQRTANALRMRTETTLRRTEAGVHLLIEAFPDPVLVHVGDGVLLSVNPALVQYLGFRDASELVGRH MLDLVRPEDRGAAQLHLSQALEGKSAARVVEMPLVRSDGEVVVADLVTLAVVLDGSPARITVARDFTERKRTQAQLMLTD RMASMGLLAAGIAHELNNPLAYVLSNLDFLHSAVGGVRPRMLSPEDMVELRQVLDDAREGAERMRQIVRQLRVFSRVEDG KEESVDVHAVLESVTQMAASVVRARARLVKDYGEVPFVRGNEGKLFQVFLNLLINAAHAIEEGDSEANEIRLTTRTEVGG RVMVVVSDTGQGIPPEHLRRIFDPFFTTKSSGLGTGLGLSICDTIVTALGGHISVESSIGAGTTFRVALSAAPPKAPANR PGA >Mature_722_residues ADEQRDAAVMDAPGKASGTAPADMACDLLPPMKSQASHAGSQVESERFRHLSELLHEVVFQLDAQGRLAVLGGAWERLTG TPVSAWRGRALLEAIHPEDRERAQALLAYTPGIPVSRQEVRVDTGGGHGVRWVELSARALATVPGEVMGTLLDVTSRRTA EEAVTTRERYLDAMVQVQRRMMGHDLPDDLYGAVVEPLGHVSAASRVYVFEMHFAEDGTLLASQRAEWCAPGIPPNLEDP NMHGLPFDAALRPHQSEQLQRGEPVQGQPRDFSELLAPMLEAQGVRSVLLLPMHVHGQLFGVIGFDNCREPESWGPIEVN LLSGAAGALSLALEQRTANALRMRTETTLRRTEAGVHLLIEAFPDPVLVHVGDGVLLSVNPALVQYLGFRDASELVGRHM LDLVRPEDRGAAQLHLSQALEGKSAARVVEMPLVRSDGEVVVADLVTLAVVLDGSPARITVARDFTERKRTQAQLMLTDR MASMGLLAAGIAHELNNPLAYVLSNLDFLHSAVGGVRPRMLSPEDMVELRQVLDDAREGAERMRQIVRQLRVFSRVEDGK EESVDVHAVLESVTQMAASVVRARARLVKDYGEVPFVRGNEGKLFQVFLNLLINAAHAIEEGDSEANEIRLTTRTEVGGR VMVVVSDTGQGIPPEHLRRIFDPFFTTKSSGLGTGLGLSICDTIVTALGGHISVESSIGAGTTFRVALSAAPPKAPANRP GA
Specific function: Phosphorylates the sporulation-regulatory proteins spo0A and spo0F. It also autophosphorylates in the presence of ATP [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Integral Membrane Protein. Inner Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 3 PAS (PER-ARNT-SIM) domains [H]
Homologues:
Organism=Escherichia coli, GI1788549, Length=376, Percent_Identity=28.7234042553192, Blast_Score=116, Evalue=4e-27, Organism=Escherichia coli, GI1790436, Length=269, Percent_Identity=30.1115241635688, Blast_Score=102, Evalue=1e-22, Organism=Escherichia coli, GI1786600, Length=361, Percent_Identity=26.0387811634349, Blast_Score=83, Evalue=6e-17, Organism=Escherichia coli, GI145693157, Length=251, Percent_Identity=27.4900398406374, Blast_Score=79, Evalue=1e-15, Organism=Escherichia coli, GI87081816, Length=237, Percent_Identity=29.957805907173, Blast_Score=75, Evalue=2e-14, Organism=Escherichia coli, GI48994928, Length=404, Percent_Identity=22.5247524752475, Blast_Score=74, Evalue=3e-14, Organism=Escherichia coli, GI1790300, Length=253, Percent_Identity=29.6442687747036, Blast_Score=72, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR001610 - InterPro: IPR000014 - InterPro: IPR013767 - InterPro: IPR013655 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA; PF00989 PAS; PF08447 PAS_3 [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 78276; Mature: 78145
Theoretical pI: Translated: 5.51; Mature: 5.51
Prosite motif: PS50112 PAS ; PS50109 HIS_KIN ; PS50046 PHYTOCHROME_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADEQRDAAVMDAPGKASGTAPADMACDLLPPMKSQASHAGSQVESERFRHLSELLHEVV CCCCCCCCEEECCCCCCCCCCCHHHHHHCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHH FQLDAQGRLAVLGGAWERLTGTPVSAWRGRALLEAIHPEDRERAQALLAYTPGIPVSRQE HHCCCCCCEEEECCCHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHEEHEECCCCCCCCCE VRVDTGGGHGVRWVELSARALATVPGEVMGTLLDVTSRRTAEEAVTTRERYLDAMVQVQR EEEECCCCCCEEEEEECCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RMMGHDLPDDLYGAVVEPLGHVSAASRVYVFEMHFAEDGTLLASQRAEWCAPGIPPNLED HHHCCCCCHHHHHHHHHHHHHHHHCCEEEEEEEEECCCCCEEHHCCHHHCCCCCCCCCCC PNMHGLPFDAALRPHQSEQLQRGEPVQGQPRDFSELLAPMLEAQGVRSVLLLPMHVHGQL CCCCCCCCHHHCCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEEEECCEE FGVIGFDNCREPESWGPIEVNLLSGAAGALSLALEQRTANALRMRTETTLRRTEAGVHLL EEEEECCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEE IEAFPDPVLVHVGDGVLLSVNPALVQYLGFRDASELVGRHMLDLVRPEDRGAAQLHLSQA EECCCCCEEEEECCCEEEEECHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHH LEGKSAARVVEMPLVRSDGEVVVADLVTLAVVLDGSPARITVARDFTERKRTQAQLMLTD HCCCHHHHHHCCCEECCCCCEEHHHHHHHHHEECCCCCEEEEECCHHHHHHHHHHHHHHH RMASMGLLAAGIAHELNNPLAYVLSNLDFLHSAVGGVRPRMLSPEDMVELRQVLDDAREG HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHH AERMRQIVRQLRVFSRVEDGKEESVDVHAVLESVTQMAASVVRARARLVKDYGEVPFVRG HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEC NEGKLFQVFLNLLINAAHAIEEGDSEANEIRLTTRTEVGGRVMVVVSDTGQGIPPEHLRR CCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCEEEEEEECCCCCCCHHHHHH IFDPFFTTKSSGLGTGLGLSICDTIVTALGGHISVESSIGAGTTFRVALSAAPPKAPANR HHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCEEEECCCCCCCEEEEEEECCCCCCCCCC PGA CCC >Mature Secondary Structure ADEQRDAAVMDAPGKASGTAPADMACDLLPPMKSQASHAGSQVESERFRHLSELLHEVV CCCCCCCEEECCCCCCCCCCCHHHHHHCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHH FQLDAQGRLAVLGGAWERLTGTPVSAWRGRALLEAIHPEDRERAQALLAYTPGIPVSRQE HHCCCCCCEEEECCCHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHEEHEECCCCCCCCCE VRVDTGGGHGVRWVELSARALATVPGEVMGTLLDVTSRRTAEEAVTTRERYLDAMVQVQR EEEECCCCCCEEEEEECCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RMMGHDLPDDLYGAVVEPLGHVSAASRVYVFEMHFAEDGTLLASQRAEWCAPGIPPNLED HHHCCCCCHHHHHHHHHHHHHHHHCCEEEEEEEEECCCCCEEHHCCHHHCCCCCCCCCCC PNMHGLPFDAALRPHQSEQLQRGEPVQGQPRDFSELLAPMLEAQGVRSVLLLPMHVHGQL CCCCCCCCHHHCCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEEEECCEE FGVIGFDNCREPESWGPIEVNLLSGAAGALSLALEQRTANALRMRTETTLRRTEAGVHLL EEEEECCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEE IEAFPDPVLVHVGDGVLLSVNPALVQYLGFRDASELVGRHMLDLVRPEDRGAAQLHLSQA EECCCCCEEEEECCCEEEEECHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHH LEGKSAARVVEMPLVRSDGEVVVADLVTLAVVLDGSPARITVARDFTERKRTQAQLMLTD HCCCHHHHHHCCCEECCCCCEEHHHHHHHHHEECCCCCEEEEECCHHHHHHHHHHHHHHH RMASMGLLAAGIAHELNNPLAYVLSNLDFLHSAVGGVRPRMLSPEDMVELRQVLDDAREG HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHH AERMRQIVRQLRVFSRVEDGKEESVDVHAVLESVTQMAASVVRARARLVKDYGEVPFVRG HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEC NEGKLFQVFLNLLINAAHAIEEGDSEANEIRLTTRTEVGGRVMVVVSDTGQGIPPEHLRR CCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCEEEEEEECCCCCCCHHHHHH IFDPFFTTKSSGLGTGLGLSICDTIVTALGGHISVESSIGAGTTFRVALSAAPPKAPANR HHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCEEEECCCCCCCEEEEEEECCCCCCCCCC PGA CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 2104615; 2509430; 9384377 [H]