| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108758514
Identifier: 108758514
GI number: 108758514
Start: 5175076
End: 5176773
Strand: Reverse
Name: 108758514
Synonym: MXAN_4216
Alternate gene names: NA
Gene position: 5176773-5175076 (Counterclockwise)
Preceding gene: 108761010
Following gene: 108757734
Centisome position: 56.64
GC content: 70.32
Gene sequence:
>1698_bases GTGAGGGGCGTGGTGGCCCTGGAGCCGGGCCGGGAAGCGCCTGATGCTGGGGCCCGCGTTCGAGGGCCGCGCGCGGGTGC CCCGAGCCGGTTAGGCTCTCCCCGTATGGCCGAGAACCCTCGCGAGCTGATCCGCGCCGCGCAGTCCGCCGAGACACAGG GAGACGTGGCCCGTGCGGTGGAGTGCCTGCAGAAAGCGGCGGAGCTGTGCCGACAGGCAGGTAATCCGTCCCGCGCGTTG CAGTTGCTTCGCCATGCGCAGCGGTTGGACGGCAGCCGCGCGGACATCGCGGATGCGGTGAACCGGCTGGAGTGGATGCC GGAGCCTTCGCTCACGCGGTCTGGGGCAGACGCTGACGACGAAGAGGCATTGCCTGCGTCCGGGGTGGTGCATTCCCTGG AGTCGGAGGTGTTGCCGGACGTCGTCCACCGGCAGCGGCTCATCGAGGATGCGCTGCGCGAGGCGGCCCTGCACGCCGGT GACGACGCGCCGCGCGACGCCGCCCAGGCCTGGGTCATCGAGACGGAGGTCGCGGAAGATCTGCAGCGGCTCGAAGCGCA GATTGCGCGCATCGCGGGGGTGGTCGCAGGGGCGGAAGATTCCTCGTCGCCACCGGATGCGACTGTGGACGTGCGGGGCG GCGTTGCGTCCATACCGGGTGATGGCGTGGGCGAGCAGGAACTTCTGGGCGTCGAGGAGCCCACGACGCAGCTTGCGTCA TCTCGAATGGCGGGTGAGGCAGAGGAAGCACCCGCAGGAGAGGACATCCTCACGGATGCCCAGCCTCGGCGTCGCAGAGA GGCTCGGCTCGTCGAGCGCGGCCCTACGCGTGCGGATGCCGCGCTCGACGCATGGTGCTCCTTCTGTTGCCGTCCGCGTA CGGACACGGGGGGCCTGGTCGCGGGGCCTGCGGGCGCGTTCATCTGCAAGAACTGCCTGTTCGAGTCGCAATCGCTGCTG GGCGACGTCACTTTGGTGCCTCCGCCCACGGTGTCGCGGCCGGAACGGCCCGTGACACCTGCCTTGGGGCTCGTGGGGCA GGGCGTGACGCAGGCGCTGCTGACGCAGTCGCTCGAGGCCCACGCGCGGACCCTCTTGGTCATCGGGCCCGAAGGCAGTG GCAAGAGCGTCTGGTTCCAGCAGCTCCAGCGAGAGGCCGTGGGCGTCATCACCCCCGTCGCGGACCTGGACCTGACGGCT TCCTCGCGCACGCTGCTGGTGGAGGATGTGGACCGCCTGGACGCGACGTCACACGCGGCCCTGCAGGCCTTCCTGGCCCG GGACAGCCGCCCCGTCGTCCTGCTGAGCGCGAGGGGCATGCGCACGGAGGCTCGGGGCCTGAGCCTGCGCGGAGACGCAT ACAGTGTTTCCGTGTCCACCACCGCCGCGCTGACTCAGGCCGTGCGCGGAACCGTGCCCACGGACATTCTGGAGCACGTG CAGGTGCTCCTGTCGCTCCAGGTGCCCACACCGTCTGAATTCGTGGAGATTGCCCGCCAGCGCCTGGCCTCGCGAGAGCC CGCGGTCTCCGTCTCCGAAGAAGTGCTCATGGCGCTGGCCCAGGAGGCCAGCCGCTCGCCGCGCGCCGGCCATGAGCTGC ATGCCCTCCTCAACCGGGTACCCACGGGAACGTGGAGCCTGGCGCCCACCGTGAAGCCCTCGCCCACGCGGAAGGCTCGA AAGAAGCGAACGTCATGA
Upstream 100 bases:
>100_bases CGGATTTCACGTACGAAATCATCAAGTACCTGGAGAAGCCGGACCTGCTGTTCCTGGCCATGGCGTGAGGTGAGCGCCGT GGCAGGTCCACGCCCCTGAC
Downstream 100 bases:
>100_bases ACACCATCACCGTCTACCGCCTGGGCCGAGTGGAGTACGAGGACGGGCTCGCGCTGATGCACCTCTTCAGCGAGTCGCGC CGCCAGGGGCTCTCCGGCGA
Product: TPR repeat-containing ClpX C4-type zinc finger protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 565; Mature: 565
Protein sequence:
>565_residues MRGVVALEPGREAPDAGARVRGPRAGAPSRLGSPRMAENPRELIRAAQSAETQGDVARAVECLQKAAELCRQAGNPSRAL QLLRHAQRLDGSRADIADAVNRLEWMPEPSLTRSGADADDEEALPASGVVHSLESEVLPDVVHRQRLIEDALREAALHAG DDAPRDAAQAWVIETEVAEDLQRLEAQIARIAGVVAGAEDSSSPPDATVDVRGGVASIPGDGVGEQELLGVEEPTTQLAS SRMAGEAEEAPAGEDILTDAQPRRRREARLVERGPTRADAALDAWCSFCCRPRTDTGGLVAGPAGAFICKNCLFESQSLL GDVTLVPPPTVSRPERPVTPALGLVGQGVTQALLTQSLEAHARTLLVIGPEGSGKSVWFQQLQREAVGVITPVADLDLTA SSRTLLVEDVDRLDATSHAALQAFLARDSRPVVLLSARGMRTEARGLSLRGDAYSVSVSTTAALTQAVRGTVPTDILEHV QVLLSLQVPTPSEFVEIARQRLASREPAVSVSEEVLMALAQEASRSPRAGHELHALLNRVPTGTWSLAPTVKPSPTRKAR KKRTS
Sequences:
>Translated_565_residues MRGVVALEPGREAPDAGARVRGPRAGAPSRLGSPRMAENPRELIRAAQSAETQGDVARAVECLQKAAELCRQAGNPSRAL QLLRHAQRLDGSRADIADAVNRLEWMPEPSLTRSGADADDEEALPASGVVHSLESEVLPDVVHRQRLIEDALREAALHAG DDAPRDAAQAWVIETEVAEDLQRLEAQIARIAGVVAGAEDSSSPPDATVDVRGGVASIPGDGVGEQELLGVEEPTTQLAS SRMAGEAEEAPAGEDILTDAQPRRRREARLVERGPTRADAALDAWCSFCCRPRTDTGGLVAGPAGAFICKNCLFESQSLL GDVTLVPPPTVSRPERPVTPALGLVGQGVTQALLTQSLEAHARTLLVIGPEGSGKSVWFQQLQREAVGVITPVADLDLTA SSRTLLVEDVDRLDATSHAALQAFLARDSRPVVLLSARGMRTEARGLSLRGDAYSVSVSTTAALTQAVRGTVPTDILEHV QVLLSLQVPTPSEFVEIARQRLASREPAVSVSEEVLMALAQEASRSPRAGHELHALLNRVPTGTWSLAPTVKPSPTRKAR KKRTS >Mature_565_residues MRGVVALEPGREAPDAGARVRGPRAGAPSRLGSPRMAENPRELIRAAQSAETQGDVARAVECLQKAAELCRQAGNPSRAL QLLRHAQRLDGSRADIADAVNRLEWMPEPSLTRSGADADDEEALPASGVVHSLESEVLPDVVHRQRLIEDALREAALHAG DDAPRDAAQAWVIETEVAEDLQRLEAQIARIAGVVAGAEDSSSPPDATVDVRGGVASIPGDGVGEQELLGVEEPTTQLAS SRMAGEAEEAPAGEDILTDAQPRRRREARLVERGPTRADAALDAWCSFCCRPRTDTGGLVAGPAGAFICKNCLFESQSLL GDVTLVPPPTVSRPERPVTPALGLVGQGVTQALLTQSLEAHARTLLVIGPEGSGKSVWFQQLQREAVGVITPVADLDLTA SSRTLLVEDVDRLDATSHAALQAFLARDSRPVVLLSARGMRTEARGLSLRGDAYSVSVSTTAALTQAVRGTVPTDILEHV QVLLSLQVPTPSEFVEIARQRLASREPAVSVSEEVLMALAQEASRSPRAGHELHALLNRVPTGTWSLAPTVKPSPTRKAR KKRTS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 59956; Mature: 59956
Theoretical pI: Translated: 5.15; Mature: 5.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRGVVALEPGREAPDAGARVRGPRAGAPSRLGSPRMAENPRELIRAAQSAETQGDVARAV CCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHH ECLQKAAELCRQAGNPSRALQLLRHAQRLDGSRADIADAVNRLEWMPEPSLTRSGADADD HHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCC EEALPASGVVHSLESEVLPDVVHRQRLIEDALREAALHAGDDAPRDAAQAWVIETEVAED CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH LQRLEAQIARIAGVVAGAEDSSSPPDATVDVRGGVASIPGDGVGEQELLGVEEPTTQLAS HHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCEEECCCCCCCHHHHCCCCCHHHHHHH SRMAGEAEEAPAGEDILTDAQPRRRREARLVERGPTRADAALDAWCSFCCRPRTDTGGLV HHHCCCCCCCCCCCHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCEE AGPAGAFICKNCLFESQSLLGDVTLVPPPTVSRPERPVTPALGLVGQGVTQALLTQSLEA ECCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH HARTLLVIGPEGSGKSVWFQQLQREAVGVITPVADLDLTASSRTLLVEDVDRLDATSHAA HCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCHHCCCCCCCCCEEHHHHHHHHCCHHHHH LQAFLARDSRPVVLLSARGMRTEARGLSLRGDAYSVSVSTTAALTQAVRGTVPTDILEHV HHHHHHCCCCCEEEEECCCCCCHHCCCEECCCEEEEEHHHHHHHHHHHHCCCCHHHHHHH QVLLSLQVPTPSEFVEIARQRLASREPAVSVSEEVLMALAQEASRSPRAGHELHALLNRV HHHHHCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHC PTGTWSLAPTVKPSPTRKARKKRTS CCCCCCCCCCCCCCCCHHHHHCCCC >Mature Secondary Structure MRGVVALEPGREAPDAGARVRGPRAGAPSRLGSPRMAENPRELIRAAQSAETQGDVARAV CCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHH ECLQKAAELCRQAGNPSRALQLLRHAQRLDGSRADIADAVNRLEWMPEPSLTRSGADADD HHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCC EEALPASGVVHSLESEVLPDVVHRQRLIEDALREAALHAGDDAPRDAAQAWVIETEVAED CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH LQRLEAQIARIAGVVAGAEDSSSPPDATVDVRGGVASIPGDGVGEQELLGVEEPTTQLAS HHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCEEECCCCCCCHHHHCCCCCHHHHHHH SRMAGEAEEAPAGEDILTDAQPRRRREARLVERGPTRADAALDAWCSFCCRPRTDTGGLV HHHCCCCCCCCCCCHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCEE AGPAGAFICKNCLFESQSLLGDVTLVPPPTVSRPERPVTPALGLVGQGVTQALLTQSLEA ECCHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH HARTLLVIGPEGSGKSVWFQQLQREAVGVITPVADLDLTASSRTLLVEDVDRLDATSHAA HCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCHHCCCCCCCCCEEHHHHHHHHCCHHHHH LQAFLARDSRPVVLLSARGMRTEARGLSLRGDAYSVSVSTTAALTQAVRGTVPTDILEHV HHHHHHCCCCCEEEEECCCCCCHHCCCEECCCEEEEEHHHHHHHHHHHHCCCCHHHHHHH QVLLSLQVPTPSEFVEIARQRLASREPAVSVSEEVLMALAQEASRSPRAGHELHALLNRV HHHHHCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHC PTGTWSLAPTVKPSPTRKARKKRTS CCCCCCCCCCCCCCCCHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA