| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
Click here to switch to the map view.
The map label for this gene is rsgA2 [H]
Identifier: 108758477
GI number: 108758477
Start: 2637563
End: 2638648
Strand: Direct
Name: rsgA2 [H]
Synonym: MXAN_2273
Alternate gene names: 108758477
Gene position: 2637563-2638648 (Clockwise)
Preceding gene: 108759626
Following gene: 108762231
Centisome position: 28.86
GC content: 72.65
Gene sequence:
>1086_bases ATGTCGCTTGAAACCCTCGGCTGGGGTCCAGCCTTCGAACACGCATTCTCTACGCTCGTCTCGCAGTCCCCACTGTCCCT CGTCCCTGGCCGCGTCGTGCGCCAGCATCGAGGGCTGCTCACGGTCCAGACGGACACGCGCACCCTGTTGGCGCGCACCG CGGGCCGGCTTCTCCATCAAGCCCCCGGCGTCGAGTCCCTGCCCACCATCGGCGACTGGGTGGCGCTCCAACTCCCCGAT GGGGACGGCGAGGCGCTGCTCCACGCGGTGCTGCCTCGCGCCAGCGTGCTCGCCCGGCGCGAGGCGGGCAGTGAGCGCGA CGGGCAGCTCATCGCCGCCAACCTGGACGTCGTGGTCCTCGTCGCGGGACTGGACGGCAACTTCAATCCCCGCCGCATCG AACGGGCATTGGCGCTGGCGTGGACCAGCGGCGCCGCGCCCGTGGTGGTGCTCACCAAGGCGGACCTGCGCCCGGACGCG GACTCGCTCGTGGCCGAGGTGGAGGAGCTGGCTCCAGGCGTACCCGTGCTCGCGCTGAGTTCCTGGACGGGGGAGGGCAT CGAGGCCCTTCGCGCGCAGCTTCCGGCCGGGAAGACGGGGGCGCTGCTCGGTTCCTCCGGTGTTGGCAAGTCCACGCTGG TCAACCGGCTCCTGGGCGAGGCGCGGCTGGTCACCCAGGCGGTCCGCGCCGAGGACGACAAGGGCCGTCACACCACCACG CACCGCGAGCTGTTCGTGCTCCCGGGCGGCGGACTGCTCATCGACGGACCCGGCATGCGCGAGCTGGGGCTGTGGGGCGA GGATGACGGCATCGGCCAGACGTTCACCGACATCCTCGAGCTGGCCGCCGGCTGCCGCTTCACGGACTGCCAGCACCAGC GCGAGCCCGGGTGCGCGGTGCGCGCGGCCGTGTCGTCGGGGGCCCTGCCCGAGGCGCGGCTCGCCAGCTACGAGCGGCTG CGGCGTGAGCAGGCCTATCAGGTCCGTCAGCGCAGTGCGTCCGCCGAGCGCGACCACCGGCGCCACGAGCGCGGCAGGAC CTTGATGGGCTGGGAGGCGTCACGCTCCAAGCGCCGGCGGGACTGA
Upstream 100 bases:
>100_bases CGGCCGCGAAGGTCTGACACAGCGCGGCCGTGCGCTCCTCGGGGAGCCCTGAAGAACCAGGTGCGCCATTGGCACCGCTC TGTCCGGAGTCCTTCCAACC
Downstream 100 bases:
>100_bases GACGTCCGTCCCTCGGGAGGCGGGTGGAGTGACCGCCTTCTGACTGCCCGGCCGCCCCACCGGCGGCCGGGCCCCGTGGC TGGCGCGCGCCGTGTCTATA
Product: putative ribosome-associated GTPase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 361; Mature: 360
Protein sequence:
>361_residues MSLETLGWGPAFEHAFSTLVSQSPLSLVPGRVVRQHRGLLTVQTDTRTLLARTAGRLLHQAPGVESLPTIGDWVALQLPD GDGEALLHAVLPRASVLARREAGSERDGQLIAANLDVVVLVAGLDGNFNPRRIERALALAWTSGAAPVVVLTKADLRPDA DSLVAEVEELAPGVPVLALSSWTGEGIEALRAQLPAGKTGALLGSSGVGKSTLVNRLLGEARLVTQAVRAEDDKGRHTTT HRELFVLPGGGLLIDGPGMRELGLWGEDDGIGQTFTDILELAAGCRFTDCQHQREPGCAVRAAVSSGALPEARLASYERL RREQAYQVRQRSASAERDHRRHERGRTLMGWEASRSKRRRD
Sequences:
>Translated_361_residues MSLETLGWGPAFEHAFSTLVSQSPLSLVPGRVVRQHRGLLTVQTDTRTLLARTAGRLLHQAPGVESLPTIGDWVALQLPD GDGEALLHAVLPRASVLARREAGSERDGQLIAANLDVVVLVAGLDGNFNPRRIERALALAWTSGAAPVVVLTKADLRPDA DSLVAEVEELAPGVPVLALSSWTGEGIEALRAQLPAGKTGALLGSSGVGKSTLVNRLLGEARLVTQAVRAEDDKGRHTTT HRELFVLPGGGLLIDGPGMRELGLWGEDDGIGQTFTDILELAAGCRFTDCQHQREPGCAVRAAVSSGALPEARLASYERL RREQAYQVRQRSASAERDHRRHERGRTLMGWEASRSKRRRD >Mature_360_residues SLETLGWGPAFEHAFSTLVSQSPLSLVPGRVVRQHRGLLTVQTDTRTLLARTAGRLLHQAPGVESLPTIGDWVALQLPDG DGEALLHAVLPRASVLARREAGSERDGQLIAANLDVVVLVAGLDGNFNPRRIERALALAWTSGAAPVVVLTKADLRPDAD SLVAEVEELAPGVPVLALSSWTGEGIEALRAQLPAGKTGALLGSSGVGKSTLVNRLLGEARLVTQAVRAEDDKGRHTTTH RELFVLPGGGLLIDGPGMRELGLWGEDDGIGQTFTDILELAAGCRFTDCQHQREPGCAVRAAVSSGALPEARLASYERLR REQAYQVRQRSASAERDHRRHERGRTLMGWEASRSKRRRD
Specific function: May play a role in 30S ribosomal subunit biogenesis. Unusual circulary permuted GTPase that catalyzes rapid hydrolysis of GTP with a slow catalytic turnover [H]
COG id: COG1162
COG function: function code R; Predicted GTPases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 engC GTPase domain [H]
Homologues:
Organism=Escherichia coli, GI87082381, Length=261, Percent_Identity=36.3984674329502, Blast_Score=147, Evalue=7e-37,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010914 - InterPro: IPR012340 - InterPro: IPR016027 - InterPro: IPR004881 [H]
Pfam domain/function: PF03193 DUF258 [H]
EC number: NA
Molecular weight: Translated: 38820; Mature: 38688
Theoretical pI: Translated: 7.70; Mature: 7.70
Prosite motif: PS50936 ENGC_GTPASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLETLGWGPAFEHAFSTLVSQSPLSLVPGRVVRQHRGLLTVQTDTRTLLARTAGRLLHQ CCCCCCCCCHHHHHHHHHHHCCCCHHHCCHHHHHHHCCEEEEECCHHHHHHHHHHHHHHH APGVESLPTIGDWVALQLPDGDGEALLHAVLPRASVLARREAGSERDGQLIAANLDVVVL CCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCEEEE VAGLDGNFNPRRIERALALAWTSGAAPVVVLTKADLRPDADSLVAEVEELAPGVPVLALS EECCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCEEEEE SWTGEGIEALRAQLPAGKTGALLGSSGVGKSTLVNRLLGEARLVTQAVRAEDDKGRHTTT CCCCHHHHHHHHHCCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC HRELFVLPGGGLLIDGPGMRELGLWGEDDGIGQTFTDILELAAGCRFTDCQHQREPGCAV CCEEEEECCCCEEECCCCCHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHH RAAVSSGALPEARLASYERLRREQAYQVRQRSASAERDHRRHERGRTLMGWEASRSKRRR HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCHHHHHCCC D C >Mature Secondary Structure SLETLGWGPAFEHAFSTLVSQSPLSLVPGRVVRQHRGLLTVQTDTRTLLARTAGRLLHQ CCCCCCCCHHHHHHHHHHHCCCCHHHCCHHHHHHHCCEEEEECCHHHHHHHHHHHHHHH APGVESLPTIGDWVALQLPDGDGEALLHAVLPRASVLARREAGSERDGQLIAANLDVVVL CCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCEEEE VAGLDGNFNPRRIERALALAWTSGAAPVVVLTKADLRPDADSLVAEVEELAPGVPVLALS EECCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCEEEEE SWTGEGIEALRAQLPAGKTGALLGSSGVGKSTLVNRLLGEARLVTQAVRAEDDKGRHTTT CCCCHHHHHHHHHCCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC HRELFVLPGGGLLIDGPGMRELGLWGEDDGIGQTFTDILELAAGCRFTDCQHQREPGCAV CCEEEEECCCCEEECCCCCHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHH RAAVSSGALPEARLASYERLRREQAYQVRQRSASAERDHRRHERGRTLMGWEASRSKRRR HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCHHHHHCCC D C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: GTP [C]
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11759840 [H]