| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108762231
Identifier: 108762231
GI number: 108762231
Start: 2638762
End: 2640129
Strand: Direct
Name: 108762231
Synonym: MXAN_2274
Alternate gene names: NA
Gene position: 2638762-2640129 (Clockwise)
Preceding gene: 108758477
Following gene: 108761431
Centisome position: 28.87
GC content: 68.93
Gene sequence:
>1368_bases ATGAAGAAGGACTCGCTCAAGGCCCGCCTGCGTCGCACGTTGCGGTGGGACCTCTGGATGACGCTGGGCCCCGCGCTCGT CATCGTCAGCATCGCGTTCGCCGTCACGTTCTACTTCGTCAAGCCCGCGCCGCCGAAGAAGGTCGTCATCGCCGCGGCTG GGGACGAGGGCGGCTTCCGGTACTTCGCGCGCAAGTATCAGGAGATTCTCGCGAAGCACGGCGTCACGGTGGAGATTCGT CCCACGGACGGCTCGCTCACCAGCATCAAACTGCTGGAGGACGAGCGCTCGGGCGTGGACGTGGCCTTCGTTCAGAGCGG GACGTCCGACGCCACCAAGGCGCCGCACGTCGTGTCCCTGGGAAGCCTCTCCTATGTGCCGTTGTGGGTCTTCTACCGAG GGCCCACTATCGACGACCTGAATGCCCTGCAGGGCAAGCGCATCGTCGTGGGCCCCGAGGAGAGTGGCACGCGCGCCCTG TCCATGAAGTTGCTGGAGGCCAACGGCGTGGGCGCCGCGCCCACGGAACTCTTGAACCTGGGGCGCGACGAGGCCATCGA GCAGCTCAAGCAGGGCAAGGTCGATGCTGTCTTCATCGTGTCCCCAGCGGAGTCGCCGCCCGTCCAGCGGCTCGCGCGGG TGCCGGACATCCATCTCCTCAGCTTCTCGCGGGGCGAGGCCTACGTGCGCCGCTACCCCTATCTGTCCCGGCACGTGCTG CCGCGGGGCGTGCTCGACCTGGCCGCGGACGTGCCAGGCCATGACGTGGTGATGTTGGCGCCCACCGCGAACCTGGTCGC CACCGATGCGCTCCACCCGGCGCTGGCCTACCTCTTGATGCGCGCGGCCAGCGAGGTCCACGGCAAGGCCGGCATCCTGG ACCGCACGGGCGAATTCCCGGCGGCGCTCGAGGCGGGCTTTCCGTTCAGCAGCGAGGCGCGCCGCTACTACGAGTCCGGC GTTCCGCTCCTGCACCGCTATCTGCCGTTCTGGGCCGCCAACTTGGTGGACCGGCTCTGGGTGATGCTGGTGCCCTTCAT CGCCGTCCTGGTGCCCCTGGGCCGGGTGGCGCCGGCGCTGTACCAGTGGCGCGTGCGCTCGCGCATCTTCCGCTGGTACG CGCGGCTGAAGGAAATCGAGCTCCAGCTCGAGGAGGGCCCGGGCCGGGAGATGCTGGAGGAGATGCTGCGGCGGCTCGAC GAGGCCGAGCGCGAGGTGAACCGCATCCCCATGCCCCTGGCCTACGCGGAGAACCTCTACTTCTTCCGGGAGCACGTCGA CGTCGTCCGTCGCCGCCTCACCCGGCGCATCGCCGAATCCGGCGAGCCCTCGTCCGAGGTGCTCACGGCCCGGGAGAAGA CCGCGTAG
Upstream 100 bases:
>100_bases CGGGAGGCGGGTGGAGTGACCGCCTTCTGACTGCCCGGCCGCCCCACCGGCGGCCGGGCCCCGTGGCTGGCGCGCGCCGT GTCTATACTCCGCGCCCATC
Downstream 100 bases:
>100_bases CCGTCGCGGCCACAGGGCGCTTCCGGGGCTTGGTCGGAAGCGCCACGAGGCCGTGGGTCAGTGCGCGAGCGCGTGCAGCA GGTTGACGTAGCTGTCGGAC
Product: TRAP transporter solute receptor TAXI family protein
Products: NA
Alternate protein names: TRAP Transporter Solute Receptor TAXI Family; TRAP-Type Transport System Periplasmic Component Protein; TRAP-Type Transport System Periplasmic Protein; Trap Transporter Solute Receptor Taxi Family Protein; TAXI Family TRAP Transporter Solute Receptor; Signal Peptide; TRAP-Type Transport System Periplasmic Component-Like; Trap Transporter Solute Receptor Taxi Family
Number of amino acids: Translated: 455; Mature: 455
Protein sequence:
>455_residues MKKDSLKARLRRTLRWDLWMTLGPALVIVSIAFAVTFYFVKPAPPKKVVIAAAGDEGGFRYFARKYQEILAKHGVTVEIR PTDGSLTSIKLLEDERSGVDVAFVQSGTSDATKAPHVVSLGSLSYVPLWVFYRGPTIDDLNALQGKRIVVGPEESGTRAL SMKLLEANGVGAAPTELLNLGRDEAIEQLKQGKVDAVFIVSPAESPPVQRLARVPDIHLLSFSRGEAYVRRYPYLSRHVL PRGVLDLAADVPGHDVVMLAPTANLVATDALHPALAYLLMRAASEVHGKAGILDRTGEFPAALEAGFPFSSEARRYYESG VPLLHRYLPFWAANLVDRLWVMLVPFIAVLVPLGRVAPALYQWRVRSRIFRWYARLKEIELQLEEGPGREMLEEMLRRLD EAEREVNRIPMPLAYAENLYFFREHVDVVRRRLTRRIAESGEPSSEVLTAREKTA
Sequences:
>Translated_455_residues MKKDSLKARLRRTLRWDLWMTLGPALVIVSIAFAVTFYFVKPAPPKKVVIAAAGDEGGFRYFARKYQEILAKHGVTVEIR PTDGSLTSIKLLEDERSGVDVAFVQSGTSDATKAPHVVSLGSLSYVPLWVFYRGPTIDDLNALQGKRIVVGPEESGTRAL SMKLLEANGVGAAPTELLNLGRDEAIEQLKQGKVDAVFIVSPAESPPVQRLARVPDIHLLSFSRGEAYVRRYPYLSRHVL PRGVLDLAADVPGHDVVMLAPTANLVATDALHPALAYLLMRAASEVHGKAGILDRTGEFPAALEAGFPFSSEARRYYESG VPLLHRYLPFWAANLVDRLWVMLVPFIAVLVPLGRVAPALYQWRVRSRIFRWYARLKEIELQLEEGPGREMLEEMLRRLD EAEREVNRIPMPLAYAENLYFFREHVDVVRRRLTRRIAESGEPSSEVLTAREKTA >Mature_455_residues MKKDSLKARLRRTLRWDLWMTLGPALVIVSIAFAVTFYFVKPAPPKKVVIAAAGDEGGFRYFARKYQEILAKHGVTVEIR PTDGSLTSIKLLEDERSGVDVAFVQSGTSDATKAPHVVSLGSLSYVPLWVFYRGPTIDDLNALQGKRIVVGPEESGTRAL SMKLLEANGVGAAPTELLNLGRDEAIEQLKQGKVDAVFIVSPAESPPVQRLARVPDIHLLSFSRGEAYVRRYPYLSRHVL PRGVLDLAADVPGHDVVMLAPTANLVATDALHPALAYLLMRAASEVHGKAGILDRTGEFPAALEAGFPFSSEARRYYESG VPLLHRYLPFWAANLVDRLWVMLVPFIAVLVPLGRVAPALYQWRVRSRIFRWYARLKEIELQLEEGPGREMLEEMLRRLD EAEREVNRIPMPLAYAENLYFFREHVDVVRRRLTRRIAESGEPSSEVLTAREKTA
Specific function: Unknown
COG id: COG2358
COG function: function code R; TRAP-type uncharacterized transport system, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50901; Mature: 50901
Theoretical pI: Translated: 9.62; Mature: 9.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKDSLKARLRRTLRWDLWMTLGPALVIVSIAFAVTFYFVKPAPPKKVVIAAAGDEGGFR CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCEEEEEECCCCCHHH YFARKYQEILAKHGVTVEIRPTDGSLTSIKLLEDERSGVDVAFVQSGTSDATKAPHVVSL HHHHHHHHHHHHCCCEEEEECCCCCEEEEEEEECCCCCCEEEEEECCCCCCCCCCCEEEE GSLSYVPLWVFYRGPTIDDLNALQGKRIVVGPEESGTRALSMKLLEANGVGAAPTELLNL CCCCEEEEEEEECCCCCCCHHHCCCCEEEECCCCCCCCEEEEEEEECCCCCCCHHHHHHC GRDEAIEQLKQGKVDAVFIVSPAESPPVQRLARVPDIHLLSFSRGEAYVRRYPYLSRHVL CHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHCCCCEEEEEECCCHHHHHHCCCHHHHCC PRGVLDLAADVPGHDVVMLAPTANLVATDALHPALAYLLMRAASEVHGKAGILDRTGEFP CHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC AALEAGFPFSSEARRYYESGVPLLHRYLPFWAANLVDRLWVMLVPFIAVLVPLGRVAPAL CHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YQWRVRSRIFRWYARLKEIELQLEEGPGREMLEEMLRRLDEAEREVNRIPMPLAYAENLY HHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH FFREHVDVVRRRLTRRIAESGEPSSEVLTAREKTA HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCC >Mature Secondary Structure MKKDSLKARLRRTLRWDLWMTLGPALVIVSIAFAVTFYFVKPAPPKKVVIAAAGDEGGFR CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCEEEEEECCCCCHHH YFARKYQEILAKHGVTVEIRPTDGSLTSIKLLEDERSGVDVAFVQSGTSDATKAPHVVSL HHHHHHHHHHHHCCCEEEEECCCCCEEEEEEEECCCCCCEEEEEECCCCCCCCCCCEEEE GSLSYVPLWVFYRGPTIDDLNALQGKRIVVGPEESGTRALSMKLLEANGVGAAPTELLNL CCCCEEEEEEEECCCCCCCHHHCCCCEEEECCCCCCCCEEEEEEEECCCCCCCHHHHHHC GRDEAIEQLKQGKVDAVFIVSPAESPPVQRLARVPDIHLLSFSRGEAYVRRYPYLSRHVL CHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHCCCCEEEEEECCCHHHHHHCCCHHHHCC PRGVLDLAADVPGHDVVMLAPTANLVATDALHPALAYLLMRAASEVHGKAGILDRTGEFP CHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC AALEAGFPFSSEARRYYESGVPLLHRYLPFWAANLVDRLWVMLVPFIAVLVPLGRVAPAL CHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YQWRVRSRIFRWYARLKEIELQLEEGPGREMLEEMLRRLDEAEREVNRIPMPLAYAENLY HHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH FFREHVDVVRRRLTRRIAESGEPSSEVLTAREKTA HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA