| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is mltD [H]
Identifier: 108758438
GI number: 108758438
Start: 7053609
End: 7055639
Strand: Direct
Name: mltD [H]
Synonym: MXAN_5690
Alternate gene names: 108758438
Gene position: 7053609-7055639 (Clockwise)
Preceding gene: 108758850
Following gene: 108757350
Centisome position: 77.17
GC content: 68.93
Gene sequence:
>2031_bases ATGCCGCCTCTACCTCTGCTCCTGCTCGCCCTGGCCTCAGCCCCTGCCTCGGGGCTCACCCCACCGCCCGTGGGGCCCGT TCCTGCCAAGGCTCAGGTGGTGGAATCCGAGGGTGCGCAGGCACCCGCAGCGCAGTCTCCGGCCGAGAAGGAACCAACGG CCGCCACGGAACCTGGCGCCGCGGATACCGGGACCGATGCTGTCGATGAGCCCGGTTTGGAGCCGCTGGAGCCCGGCACG CCGATGGTGGCCGAGGACGCCTCCGAGCAAGGCGAGGCCACGCGCGACGCGGTTGAGTCCGAGTCCGCTGAGTTGGAGGA ACTGCGTGCACTGGAAGGCGCCGCGCTGGACCCGGCGTCGCGCTCCACCGCGGAGGTGATGCAGTCGCTGCGGCGGCTCG GGGTCGCCAACCCGCTGCGGATGCGCATGCTGGACGCGCTCGACGAGCACACCTTCCGCGAGGACGAAGAGCTGCCGGAG ATTCCGCTCATCACGGACCTGGCCACTTTCGACGTGGGGCAGATTCAGGACCGTTACGACATCCCAGTGGAGATGCAGCC GCTGGTGGCCCAGTACGTCCAGTTCTTCCAGGGGCCCGGGCGACGCTGGTTCCGCAAGTGGATGTCGCGCGCGGCCCGGT ACGTGCCGGTGATGCACCCCATCCTGGAGCAGTACGGCCTGCCGAAGGACACGGTGTACCTGGCGATGATTGAGAGCGGC TTCTCGGCGCATGCCTATTCGTGGGCGCACGCGGCGGGGCCGTGGCAGTTCATCTCCAGCACTGGCAAGCAGTACGGGCT GAAGCAGGACTTCTGGGTGGACGAGCGGCGGGACCCCATCAAGGCCACCCACGCCGCGGCGTCCTATCTGAAGGACCTCA AGCGCGAGCTGGGGCACTGGTACCTGGCATGGGCCGGATACAACACCGGCTCCGGGCGCGTCCGGCGGATGGTGGAGCGG CACGGGACGACGAACTTCTGGCTCCTGTCCGAAGAGCGCGGCCTGGCGAAGGAGACGAAGCACTACGTGCCCAAGCTGAT TGCCGCGGCGCTGGTGGCCAAGCACCCGGCGGCGTTCGGCTTCAACGAGAACGAGTTCGACCCCGAGCCCGTGCTCGACT TCGATGAGGTGCAGCTCACCGACGCGGCGGACCTGGACGTCGTCGCCCGCGCGGCCGGCGTGCCCGTCAAGGTGGTGCAG GACCTCAACCCTGAGCTGAAGCGCTGGTGCACCCCGCCGGCGACGGCCAAGAAGCCCTACACGCTCCGGCTTCCCAAGGG GGCAGGGACGCAGTTCGCGGACAACTACAAGCGCATCAGCCCCGCGGAGCGGCTCACCTTCCGCATCCACAAGGTGAAGC GCGGCGACACCCTGTCCCAGATCGCGGAGACGTACGGCACGGCGTCCGAGGCCATCCTCCAAATGAACCAGCTGAAGTCG GCCCGGACGTTGCGCGTGGGTGGAGAGCTGGTGATTCCGATTCCCGCCGGCAAGAGCTCGGGCGGCGCGCTGGCGACGAA GGTGGCGCAGGCCCGCCGCAGCGGCGTGGTGGTGCGGCCCGAGGACGAGGTACCAGCGGGCACGCCCAAAGGCCCGGTGG CCGCGGGCCCCGTGAAGAAGGAGACCATCAACGGGCGCACGCGCGTGACGTACGGCGTGATGTCCGGCGACAGCCTCTGG GTGATTGCGAACAAGTTCAACGTGTCGGTGGACTCGCTGAAGCAGTGGAACAACCTCAAGCGGCGCAACCCGACGCTCCA GGTGGGCTCCACGCTGTTCGTCTGGCCCGATGGCAACACGGCCACCGCCAGCGTGCAGGAGCGCGGCGGCACGGTGCTGG CGAAGCACTCGGTGAGCGTCGCCAAGCCCGCGGGCAAGGCTGGCAAGGTCCACGCGCTGGCGGAGGGCGAGACGCTCTGG TCCGTCGCGCAGCGCTACGGCGTCAGCGTGGACGACATCATGCGGTGGAACAAGATCAAGGACCACCGCACCCTCCCCAC GGGGAAGGTGCTCCTCCTCAGCGCCCCGTAG
Upstream 100 bases:
>100_bases AAACAAGACGCGCAGGCCGCGACTCCTTGTTTGACTGTCAAGGAAAAGGGCGATTACTTCCCGCTTTCGCCCGCCTCCGG GCGCCCGTTCCCGCGACTGT
Downstream 100 bases:
>100_bases TCTCCGGCGCGTACACGGTGAAGGCGAGCTCCGCACCCACACTGGCGAGCTGCTGGACGACGAGTTCCGGCACGGGGAAG GCGCTCGAATGGGGCTCCAG
Product: Slt family transglycosylase
Products: 1,6-Anhydrobond In The Muramic Acid Residue [C]
Alternate protein names: Murein hydrolase D; Regulatory protein dniR [H]
Number of amino acids: Translated: 676; Mature: 675
Protein sequence:
>676_residues MPPLPLLLLALASAPASGLTPPPVGPVPAKAQVVESEGAQAPAAQSPAEKEPTAATEPGAADTGTDAVDEPGLEPLEPGT PMVAEDASEQGEATRDAVESESAELEELRALEGAALDPASRSTAEVMQSLRRLGVANPLRMRMLDALDEHTFREDEELPE IPLITDLATFDVGQIQDRYDIPVEMQPLVAQYVQFFQGPGRRWFRKWMSRAARYVPVMHPILEQYGLPKDTVYLAMIESG FSAHAYSWAHAAGPWQFISSTGKQYGLKQDFWVDERRDPIKATHAAASYLKDLKRELGHWYLAWAGYNTGSGRVRRMVER HGTTNFWLLSEERGLAKETKHYVPKLIAAALVAKHPAAFGFNENEFDPEPVLDFDEVQLTDAADLDVVARAAGVPVKVVQ DLNPELKRWCTPPATAKKPYTLRLPKGAGTQFADNYKRISPAERLTFRIHKVKRGDTLSQIAETYGTASEAILQMNQLKS ARTLRVGGELVIPIPAGKSSGGALATKVAQARRSGVVVRPEDEVPAGTPKGPVAAGPVKKETINGRTRVTYGVMSGDSLW VIANKFNVSVDSLKQWNNLKRRNPTLQVGSTLFVWPDGNTATASVQERGGTVLAKHSVSVAKPAGKAGKVHALAEGETLW SVAQRYGVSVDDIMRWNKIKDHRTLPTGKVLLLSAP
Sequences:
>Translated_676_residues MPPLPLLLLALASAPASGLTPPPVGPVPAKAQVVESEGAQAPAAQSPAEKEPTAATEPGAADTGTDAVDEPGLEPLEPGT PMVAEDASEQGEATRDAVESESAELEELRALEGAALDPASRSTAEVMQSLRRLGVANPLRMRMLDALDEHTFREDEELPE IPLITDLATFDVGQIQDRYDIPVEMQPLVAQYVQFFQGPGRRWFRKWMSRAARYVPVMHPILEQYGLPKDTVYLAMIESG FSAHAYSWAHAAGPWQFISSTGKQYGLKQDFWVDERRDPIKATHAAASYLKDLKRELGHWYLAWAGYNTGSGRVRRMVER HGTTNFWLLSEERGLAKETKHYVPKLIAAALVAKHPAAFGFNENEFDPEPVLDFDEVQLTDAADLDVVARAAGVPVKVVQ DLNPELKRWCTPPATAKKPYTLRLPKGAGTQFADNYKRISPAERLTFRIHKVKRGDTLSQIAETYGTASEAILQMNQLKS ARTLRVGGELVIPIPAGKSSGGALATKVAQARRSGVVVRPEDEVPAGTPKGPVAAGPVKKETINGRTRVTYGVMSGDSLW VIANKFNVSVDSLKQWNNLKRRNPTLQVGSTLFVWPDGNTATASVQERGGTVLAKHSVSVAKPAGKAGKVHALAEGETLW SVAQRYGVSVDDIMRWNKIKDHRTLPTGKVLLLSAP >Mature_675_residues PPLPLLLLALASAPASGLTPPPVGPVPAKAQVVESEGAQAPAAQSPAEKEPTAATEPGAADTGTDAVDEPGLEPLEPGTP MVAEDASEQGEATRDAVESESAELEELRALEGAALDPASRSTAEVMQSLRRLGVANPLRMRMLDALDEHTFREDEELPEI PLITDLATFDVGQIQDRYDIPVEMQPLVAQYVQFFQGPGRRWFRKWMSRAARYVPVMHPILEQYGLPKDTVYLAMIESGF SAHAYSWAHAAGPWQFISSTGKQYGLKQDFWVDERRDPIKATHAAASYLKDLKRELGHWYLAWAGYNTGSGRVRRMVERH GTTNFWLLSEERGLAKETKHYVPKLIAAALVAKHPAAFGFNENEFDPEPVLDFDEVQLTDAADLDVVARAAGVPVKVVQD LNPELKRWCTPPATAKKPYTLRLPKGAGTQFADNYKRISPAERLTFRIHKVKRGDTLSQIAETYGTASEAILQMNQLKSA RTLRVGGELVIPIPAGKSSGGALATKVAQARRSGVVVRPEDEVPAGTPKGPVAAGPVKKETINGRTRVTYGVMSGDSLWV IANKFNVSVDSLKQWNNLKRRNPTLQVGSTLFVWPDGNTATASVQERGGTVLAKHSVSVAKPAGKAGKVHALAEGETLWS VAQRYGVSVDDIMRWNKIKDHRTLPTGKVLLLSAP
Specific function: Murein-degrading enzyme. May play a role in recycling of muropeptides during cell elongation and/or cell division [H]
COG id: COG0741
COG function: function code M; Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains)
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 LysM repeats [H]
Homologues:
Organism=Escherichia coli, GI1786405, Length=402, Percent_Identity=29.3532338308458, Blast_Score=140, Evalue=3e-34,
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008258 - InterPro: IPR010511 - InterPro: IPR018392 - InterPro: IPR002482 - InterPro: IPR000189 [H]
Pfam domain/function: PF01476 LysM; PF06474 MLTD_N; PF01464 SLT [H]
EC number: 3.2.1.- [C]
Molecular weight: Translated: 73573; Mature: 73442
Theoretical pI: Translated: 7.22; Mature: 7.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPPLPLLLLALASAPASGLTPPPVGPVPAKAQVVESEGAQAPAAQSPAEKEPTAATEPGA CCCHHHHHHHHHCCCCCCCCCCCCCCCCCCHHEECCCCCCCCCCCCCCCCCCCCCCCCCC ADTGTDAVDEPGLEPLEPGTPMVAEDASEQGEATRDAVESESAELEELRALEGAALDPAS CCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCC RSTAEVMQSLRRLGVANPLRMRMLDALDEHTFREDEELPEIPLITDLATFDVGQIQDRYD CCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEHHHHHCCHHHCCCCCC IPVEMQPLVAQYVQFFQGPGRRWFRKWMSRAARYVPVMHPILEQYGLPKDTVYLAMIESG CCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHEEEEEECCC FSAHAYSWAHAAGPWQFISSTGKQYGLKQDFWVDERRDPIKATHAAASYLKDLKRELGHW CCCCCCCHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCE YLAWAGYNTGSGRVRRMVERHGTTNFWLLSEERGLAKETKHYVPKLIAAALVAKHPAAFG EEEEECCCCCCHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCC FNENEFDPEPVLDFDEVQLTDAADLDVVARAAGVPVKVVQDLNPELKRWCTPPATAKKPY CCCCCCCCCCCCCCCCEEECCCCCHHHHHHHCCCCHHHHHCCCHHHHHHCCCCCCCCCCE TLRLPKGAGTQFADNYKRISPAERLTFRIHKVKRGDTLSQIAETYGTASEAILQMNQLKS EEECCCCCCCCHHHHHHHCCHHHHHHHHEEHHCCCCHHHHHHHHHCCHHHHHHHHHHHHC ARTLRVGGELVIPIPAGKSSGGALATKVAQARRSGVVVRPEDEVPAGTPKGPVAAGPVKK CCEEEECCEEEEEECCCCCCCCHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCCCCCCH ETINGRTRVTYGVMSGDSLWVIANKFNVSVDSLKQWNNLKRRNPTLQVGSTLFVWPDGNT HHCCCCEEEEEEEECCCEEEEEEEECCCCHHHHHHHHHHHHCCCCEEECCEEEEECCCCC ATASVQERGGTVLAKHSVSVAKPAGKAGKVHALAEGETLWSVAQRYGVSVDDIMRWNKIK EEEEHHHCCCEEEEECCCHHCCCCCCCCCEEEEECCHHHHHHHHHHCCCHHHHHHHHHCC DHRTLPTGKVLLLSAP CCCCCCCCCEEEEECC >Mature Secondary Structure PPLPLLLLALASAPASGLTPPPVGPVPAKAQVVESEGAQAPAAQSPAEKEPTAATEPGA CCHHHHHHHHHCCCCCCCCCCCCCCCCCCHHEECCCCCCCCCCCCCCCCCCCCCCCCCC ADTGTDAVDEPGLEPLEPGTPMVAEDASEQGEATRDAVESESAELEELRALEGAALDPAS CCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCC RSTAEVMQSLRRLGVANPLRMRMLDALDEHTFREDEELPEIPLITDLATFDVGQIQDRYD CCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEHHHHHCCHHHCCCCCC IPVEMQPLVAQYVQFFQGPGRRWFRKWMSRAARYVPVMHPILEQYGLPKDTVYLAMIESG CCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHEEEEEECCC FSAHAYSWAHAAGPWQFISSTGKQYGLKQDFWVDERRDPIKATHAAASYLKDLKRELGHW CCCCCCCHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCE YLAWAGYNTGSGRVRRMVERHGTTNFWLLSEERGLAKETKHYVPKLIAAALVAKHPAAFG EEEEECCCCCCHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCC FNENEFDPEPVLDFDEVQLTDAADLDVVARAAGVPVKVVQDLNPELKRWCTPPATAKKPY CCCCCCCCCCCCCCCCEEECCCCCHHHHHHHCCCCHHHHHCCCHHHHHHCCCCCCCCCCE TLRLPKGAGTQFADNYKRISPAERLTFRIHKVKRGDTLSQIAETYGTASEAILQMNQLKS EEECCCCCCCCHHHHHHHCCHHHHHHHHEEHHCCCCHHHHHHHHHCCHHHHHHHHHHHHC ARTLRVGGELVIPIPAGKSSGGALATKVAQARRSGVVVRPEDEVPAGTPKGPVAAGPVKK CCEEEECCEEEEEECCCCCCCCHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCCCCCCH ETINGRTRVTYGVMSGDSLWVIANKFNVSVDSLKQWNNLKRRNPTLQVGSTLFVWPDGNT HHCCCCEEEEEEEECCCEEEEEEEECCCCHHHHHHHHHHHHCCCCEEECCEEEEECCCCC ATASVQERGGTVLAKHSVSVAKPAGKAGKVHALAEGETLWSVAQRYGVSVDDIMRWNKIK EEEEHHHCCCEEEEECCCHHCCCCCCCCCEEEEECCHHHHHHHHHHCCCHHHHHHHHHCC DHRTLPTGKVLLLSAP CCCCCCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Muramic Acid Residue (N-Acetylmuramic Acid And N-Acetylglucosamine Residues) [C]
Specific reaction: Cleavage Of The Beta-1,4-Glycosidic Bond Between N-Acetylmuramic Acid And N-Acetylglucosamine Residues, Thereby Conserving The Energy In A Newly Synthesized 1,6-Anhydrobond In The Muramic Acid Residue. [C]
General reaction: Cleavage Of The Beta-1,4-Glycosidic Bond [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]