Click here to switch to the map view.

The map label for this gene is ybiS [C]

Identifier: 108757350

GI number: 108757350

Start: 7056068

End: 7057060

Strand: Direct

Name: ybiS [C]

Synonym: MXAN_5692

Alternate gene names: 108757350

Gene position: 7056068-7057060 (Clockwise)

Preceding gene: 108758438

Following gene: 108761393

Centisome position: 77.2

GC content: 70.29

Gene sequence:

>993_bases
ATGACCTCATCCATCTCGCCACCGGAGTCACGTATCTCGTTCCTTCCGCCTGACGTCCCGGACGCGGCATCAACACCCGC
CCTCGGGAAGACGGCACGCAGTCCCAAGCCTGTCTCCCGAGTCACCGTCGGCCAAGGTCCTCAGCCCTCGCTGGATGCAC
GTCCACGGTCCGGGACGCCCTTGCCTCTGGAAGGCGTGGACCGGCCCGCGCGCACTCCAGCGCCCCCTGACAACGCGCGC
TTCACCGGACTGCCCCAACTGGCGGACGTCGCGTCAGGGGCCCAGATCCTCGGCCCCGGCAGCCAGGGCGAGGGCCTCCG
CGCCGTACAGGCCACCCTGCTCGACATGGGCTTCGCCCTGCACGGCGGCGCAGACGGACACCACGGCCCGCACACCACCC
GAGCGCTGCGGAACTTCCAGGTCCATGCCTCGCGCACCTTCCCCGCCGTCCTCCCCACGGGCGCGCTGGATGCCTCCACG
CTACGCGCGCTGGATGCACTGGCGCCAGCGCCAGGGACGCGTGGGCAGACACGGGGATTGCCTTCCGCCTTCTTCGACGG
ACAACAGGTCCGCGTGGTGGTGGCCCTCCGGGAGCACCGGACCTTCCTCTTCGACACCCGTGGGCAACTCGTGGACATCT
TCCCCAACGCCACGGGCGCCGCGGCCTCCCCTACCCGCACCGGGATCAAGGTGGTCCGCACGAAGTTGGATCAACTGGCC
ACCGAAGCGGCCGGCGCACGGCTGTGGAATGACCGCCATGTCTTCGGCGTGCGCATGCTCGACCTCTCCTGGGCGGATGG
CCGGCACTCTGGTGAGGAGCTGCACGGAACGAACGCCCCCGCCCTCCTGGGCACGGACGTCTCGCACGGCTGCATCCGCC
ACTCGAACGAGGCCGTGCGCGTGCTGCACGACGCGCTCTCCGTGGGAGACCGCGTGGCCGTCGTCGAGCACGTGGATGAC
CCACACCTGGGGGTACCGCGTCCCGTGGCGTAA

Upstream 100 bases:

>100_bases
TTCGAGGTCCACATTCAGAAACGTCGTGGCGGAGGGTGTGGTCCTCAAAGGCAGGCCTCGCGTGGTTGGGTCGGGCGAGC
GATTTGCACTGAGGCCGGGG

Downstream 100 bases:

>100_bases
GCCCGTGCTTCCCCCGGAAGCGAAGCCCAGGCTGTGAAGCCCCGCGTCAGTTGCCGGGCGCGAAACGGAACAGGCTGGCG
GCGAAGTACAGGCTGTTGCG

Product: ErfK/YbiS/YcfS/YnhG family protein

Products: NA

Alternate protein names: Erfk/Ybis/Ycfs/Ynhg Family Protein

Number of amino acids: Translated: 330; Mature: 329

Protein sequence:

>330_residues
MTSSISPPESRISFLPPDVPDAASTPALGKTARSPKPVSRVTVGQGPQPSLDARPRSGTPLPLEGVDRPARTPAPPDNAR
FTGLPQLADVASGAQILGPGSQGEGLRAVQATLLDMGFALHGGADGHHGPHTTRALRNFQVHASRTFPAVLPTGALDAST
LRALDALAPAPGTRGQTRGLPSAFFDGQQVRVVVALREHRTFLFDTRGQLVDIFPNATGAAASPTRTGIKVVRTKLDQLA
TEAAGARLWNDRHVFGVRMLDLSWADGRHSGEELHGTNAPALLGTDVSHGCIRHSNEAVRVLHDALSVGDRVAVVEHVDD
PHLGVPRPVA

Sequences:

>Translated_330_residues
MTSSISPPESRISFLPPDVPDAASTPALGKTARSPKPVSRVTVGQGPQPSLDARPRSGTPLPLEGVDRPARTPAPPDNAR
FTGLPQLADVASGAQILGPGSQGEGLRAVQATLLDMGFALHGGADGHHGPHTTRALRNFQVHASRTFPAVLPTGALDAST
LRALDALAPAPGTRGQTRGLPSAFFDGQQVRVVVALREHRTFLFDTRGQLVDIFPNATGAAASPTRTGIKVVRTKLDQLA
TEAAGARLWNDRHVFGVRMLDLSWADGRHSGEELHGTNAPALLGTDVSHGCIRHSNEAVRVLHDALSVGDRVAVVEHVDD
PHLGVPRPVA
>Mature_329_residues
TSSISPPESRISFLPPDVPDAASTPALGKTARSPKPVSRVTVGQGPQPSLDARPRSGTPLPLEGVDRPARTPAPPDNARF
TGLPQLADVASGAQILGPGSQGEGLRAVQATLLDMGFALHGGADGHHGPHTTRALRNFQVHASRTFPAVLPTGALDASTL
RALDALAPAPGTRGQTRGLPSAFFDGQQVRVVVALREHRTFLFDTRGQLVDIFPNATGAAASPTRTGIKVVRTKLDQLAT
EAAGARLWNDRHVFGVRMLDLSWADGRHSGEELHGTNAPALLGTDVSHGCIRHSNEAVRVLHDALSVGDRVAVVEHVDDP
HLGVPRPVA

Specific function: Unknown

COG id: COG1376

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 160 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 160 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34636; Mature: 34505

Theoretical pI: Translated: 9.50; Mature: 9.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSSISPPESRISFLPPDVPDAASTPALGKTARSPKPVSRVTVGQGPQPSLDARPRSGTP
CCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCC
LPLEGVDRPARTPAPPDNARFTGLPQLADVASGAQILGPGSQGEGLRAVQATLLDMGFAL
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCEEECCCCCCCCHHHHHHHHHHHHHEE
HGGADGHHGPHTTRALRNFQVHASRTFPAVLPTGALDASTLRALDALAPAPGTRGQTRGL
ECCCCCCCCCHHHHHHHHEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCC
PSAFFDGQQVRVVVALREHRTFLFDTRGQLVDIFPNATGAAASPTRTGIKVVRTKLDQLA
CHHHCCCCEEEEEEEEECCCEEEEECCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHH
TEAAGARLWNDRHVFGVRMLDLSWADGRHSGEELHGTNAPALLGTDVSHGCIRHSNEAVR
HHHHHHHHCCCCEEEEEEEEEEECCCCCCCCCHHCCCCCCEEEECCCCHHHHHCCCHHHH
VLHDALSVGDRVAVVEHVDDPHLGVPRPVA
HHHHHHHCCCEEEEEEECCCCCCCCCCCCC
>Mature Secondary Structure 
TSSISPPESRISFLPPDVPDAASTPALGKTARSPKPVSRVTVGQGPQPSLDARPRSGTP
CCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCC
LPLEGVDRPARTPAPPDNARFTGLPQLADVASGAQILGPGSQGEGLRAVQATLLDMGFAL
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCEEECCCCCCCCHHHHHHHHHHHHHEE
HGGADGHHGPHTTRALRNFQVHASRTFPAVLPTGALDASTLRALDALAPAPGTRGQTRGL
ECCCCCCCCCHHHHHHHHEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCC
PSAFFDGQQVRVVVALREHRTFLFDTRGQLVDIFPNATGAAASPTRTGIKVVRTKLDQLA
CHHHCCCCEEEEEEEEECCCEEEEECCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHH
TEAAGARLWNDRHVFGVRMLDLSWADGRHSGEELHGTNAPALLGTDVSHGCIRHSNEAVR
HHHHHHHHCCCCEEEEEEEEEEECCCCCCCCCHHCCCCCCEEEECCCCHHHHHCCCHHHH
VLHDALSVGDRVAVVEHVDDPHLGVPRPVA
HHHHHHHCCCEEEEEEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA