| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is blh [H]
Identifier: 108758319
GI number: 108758319
Start: 216504
End: 217208
Strand: Reverse
Name: blh [H]
Synonym: MXAN_0179
Alternate gene names: 108758319
Gene position: 217208-216504 (Counterclockwise)
Preceding gene: 108759840
Following gene: 108757850
Centisome position: 2.38
GC content: 70.07
Gene sequence:
>705_bases ATGCTCTTCCGCCAGCTCTTCGACGCGGACACCTCGACGTATACGTACCTCCTGGCCGACGAGGCCACGGGCGCCGCCGC GCTCATCGACCCGGTGCTGGAACAGACGGAGCGCGACCTGAAGCTCCTCCGGGAGCTGGGCCTCACGTTGTCCGTGGTGC TGGAGACGCACGTCCACGCCGACCACGTCACCGGCGCGGGTGTACTCCGCGAGCGGACAGGCGCCACCGTGGTGGCCTCC AGCCGCGGCGCGCCCTGCGTGGACCGGACGGTGAACCATGGAGACATCGTGCGCGTGGGCGGCCTCGAAGTCCGTGTCCT CGAGACGCCCGGCCACACCGACGACAGCCTGAGCTTCCTCTGTGAGCGCCGCCTCTTCACCGGGGACGCGCTGCTCATCC GCGGCACCGGAAGGACGGACTTCCAGAACGGCGACCCGGGCCAACTCTACGACGCCATCACCCGCGTCCTCTTCACCCTT CCCGACGACACGGCGGTCTACCCCGGCCACGACTACGCCGGGCACGCCATGTCCACGGTGGGCGAGGAGAAGCAGCACAA CCCCCGGCTGGCTGGACGCACGCGCGCGGACTTCATCGTCTTGATGAACGCGCTCCAGCTCCCACCTCCCCGGAAGCTGG ACGTGGCCGTCCCCGCCAACCGGGCCTGCGGACACACGCCGCCCTCACCTTCCCTCCAGGCCTGA
Upstream 100 bases:
>100_bases CCGTGTCCCCTCGACCCGAGTCCCGCCACCTCCATCACCCCGCCTGTTGGCACGTCACTGGCAATGACGGCCTCGCACCC GATTCCGACGGAGGCGAACG
Downstream 100 bases:
>100_bases AGTCACGCGGAGCCCCCATGCATCCTCTCTGCGACAACGCCGCGCCCCATCCCGCGGGCTACCGCGACGTGGAGGTGGGA CAGCTCGCGGCGTTCCTGCC
Product: metallo-beta-lactamase family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 234; Mature: 234
Protein sequence:
>234_residues MLFRQLFDADTSTYTYLLADEATGAAALIDPVLEQTERDLKLLRELGLTLSVVLETHVHADHVTGAGVLRERTGATVVAS SRGAPCVDRTVNHGDIVRVGGLEVRVLETPGHTDDSLSFLCERRLFTGDALLIRGTGRTDFQNGDPGQLYDAITRVLFTL PDDTAVYPGHDYAGHAMSTVGEEKQHNPRLAGRTRADFIVLMNALQLPPPRKLDVAVPANRACGHTPPSPSLQA
Sequences:
>Translated_234_residues MLFRQLFDADTSTYTYLLADEATGAAALIDPVLEQTERDLKLLRELGLTLSVVLETHVHADHVTGAGVLRERTGATVVAS SRGAPCVDRTVNHGDIVRVGGLEVRVLETPGHTDDSLSFLCERRLFTGDALLIRGTGRTDFQNGDPGQLYDAITRVLFTL PDDTAVYPGHDYAGHAMSTVGEEKQHNPRLAGRTRADFIVLMNALQLPPPRKLDVAVPANRACGHTPPSPSLQA >Mature_234_residues MLFRQLFDADTSTYTYLLADEATGAAALIDPVLEQTERDLKLLRELGLTLSVVLETHVHADHVTGAGVLRERTGATVVAS SRGAPCVDRTVNHGDIVRVGGLEVRVLETPGHTDDSLSFLCERRLFTGDALLIRGTGRTDFQNGDPGQLYDAITRVLFTL PDDTAVYPGHDYAGHAMSTVGEEKQHNPRLAGRTRADFIVLMNALQLPPPRKLDVAVPANRACGHTPPSPSLQA
Specific function: Unknown
COG id: COG0491
COG function: function code R; Zn-dependent hydrolases, including glyoxylases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-B beta-lactamase family [H]
Homologues:
Organism=Homo sapiens, GI41327741, Length=232, Percent_Identity=44.8275862068966, Blast_Score=195, Evalue=3e-50, Organism=Homo sapiens, GI94538320, Length=176, Percent_Identity=32.3863636363636, Blast_Score=92, Evalue=6e-19, Organism=Homo sapiens, GI94538322, Length=176, Percent_Identity=32.3863636363636, Blast_Score=91, Evalue=7e-19, Organism=Homo sapiens, GI21703352, Length=241, Percent_Identity=30.7053941908714, Blast_Score=83, Evalue=2e-16, Organism=Homo sapiens, GI116642887, Length=241, Percent_Identity=30.7053941908714, Blast_Score=82, Evalue=3e-16, Organism=Homo sapiens, GI14150041, Length=168, Percent_Identity=35.7142857142857, Blast_Score=82, Evalue=4e-16, Organism=Homo sapiens, GI46361987, Length=168, Percent_Identity=35.7142857142857, Blast_Score=82, Evalue=5e-16, Organism=Escherichia coli, GI1787158, Length=202, Percent_Identity=34.1584158415842, Blast_Score=94, Evalue=7e-21, Organism=Caenorhabditis elegans, GI17538952, Length=227, Percent_Identity=45.8149779735683, Blast_Score=206, Evalue=9e-54, Organism=Caenorhabditis elegans, GI17536925, Length=174, Percent_Identity=33.3333333333333, Blast_Score=87, Evalue=8e-18, Organism=Saccharomyces cerevisiae, GI6324614, Length=186, Percent_Identity=29.5698924731183, Blast_Score=73, Evalue=4e-14, Organism=Saccharomyces cerevisiae, GI6320478, Length=186, Percent_Identity=30.1075268817204, Blast_Score=72, Evalue=9e-14, Organism=Drosophila melanogaster, GI221330176, Length=227, Percent_Identity=48.4581497797357, Blast_Score=229, Evalue=1e-60, Organism=Drosophila melanogaster, GI24667711, Length=183, Percent_Identity=34.9726775956284, Blast_Score=93, Evalue=1e-19, Organism=Drosophila melanogaster, GI24667703, Length=183, Percent_Identity=34.9726775956284, Blast_Score=93, Evalue=1e-19, Organism=Drosophila melanogaster, GI21356335, Length=174, Percent_Identity=36.2068965517241, Blast_Score=93, Evalue=2e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005939 - InterPro: IPR001279 [H]
Pfam domain/function: PF04273 DUF442; PF00753 Lactamase_B [H]
EC number: NA
Molecular weight: Translated: 25315; Mature: 25315
Theoretical pI: Translated: 5.79; Mature: 5.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLFRQLFDADTSTYTYLLADEATGAAALIDPVLEQTERDLKLLRELGLTLSVVLETHVHA CCHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEHHHHHCC DHVTGAGVLRERTGATVVASSRGAPCVDRTVNHGDIVRVGGLEVRVLETPGHTDDSLSFL CCCCCCHHHHHCCCCEEEECCCCCCHHHCCCCCCCEEEECCEEEEEEECCCCCCHHHHHH CERRLFTGDALLIRGTGRTDFQNGDPGQLYDAITRVLFTLPDDTAVYPGHDYAGHAMSTV HHHHHCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHEECCCCCEECCCCCCCCHHHHHH GEEKQHNPRLAGRTRADFIVLMNALQLPPPRKLDVAVPANRACGHTPPSPSLQA CCHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCCCC >Mature Secondary Structure MLFRQLFDADTSTYTYLLADEATGAAALIDPVLEQTERDLKLLRELGLTLSVVLETHVHA CCHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEHHHHHCC DHVTGAGVLRERTGATVVASSRGAPCVDRTVNHGDIVRVGGLEVRVLETPGHTDDSLSFL CCCCCCHHHHHCCCCEEEECCCCCCHHHCCCCCCCEEEECCEEEEEEECCCCCCHHHHHH CERRLFTGDALLIRGTGRTDFQNGDPGQLYDAITRVLFTLPDDTAVYPGHDYAGHAMSTV HHHHHCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHEECCCCCEECCCCCCCCHHHHHH GEEKQHNPRLAGRTRADFIVLMNALQLPPPRKLDVAVPANRACGHTPPSPSLQA CCHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11743193; 11743194 [H]