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The map label for this gene is ydfM [H]

Identifier: 108758191

GI number: 108758191

Start: 3570878

End: 3571795

Strand: Reverse

Name: ydfM [H]

Synonym: MXAN_3043

Alternate gene names: 108758191

Gene position: 3571795-3570878 (Counterclockwise)

Preceding gene: 108760740

Following gene: 108760527

Centisome position: 39.08

GC content: 68.63

Gene sequence:

>918_bases
GTGGAAGCAACGACGCTCACCGACAGAAACCTCGCGCAGCAGGAGCGGAACCGGAAGGTCCGCAGAGTGCTGCTGGGCAT
CCTCGTGGCCAACTGGGTGGTGGCCAGCGCCAAGCTGATCTTCGGAATGCTCAGCCAGTCCGCGGCGGTAACGGCGGACG
GGCTGCACTCGTTCATCGACGGCGGCTCCAACGTGCTGGGGCTGGTGGCCATGGGCGTGGCGTCACGCCCGGCGGACGAG
GACCACCCCTACGGCCACGGCAAGTTCGAGGCGCTCGCGTCGCTGGGCATTGGCGCGATGATTGGCGTGGGCATGCTGGA
GCTGGGGCGCATGGCGCTCGACTCCGTGCTCAACGACAAGCACCCGCAGGTGACGGGTACCATGGCGGCCGTCATGGCCT
TCACCCTGGTGGTGAACATGGTGGTGACGCGGGTGGAGCGGTACTACGGGCGCAAGTACAAGAGCTCCCTGCTGCTGGCG
GACGCGAGCCACACGATGTCCGACGTCTACGTCACCCTCGCGGTGCTGAGCTCCCTGCTGCTGGTGTGGCTGGGCTACCC
GCGCGCGGATGGGCTGATTGCGCTGGCGGTGATGGTGTTCGTGGCCTGGGTGGCCTACGGCATCGTCCGGCAGGCGGTGG
GCATCCTCTCCGACACGGCGCGCCTGGACCCCGACGAGGTGAAGCGGCACACGCTGGCAGTGCCGGGCGTGCGGTCCTGC
CGCGACGTGCGCAGCCGCGGCATGGAGGAGAGCGTCTACGTGGACCTCAAAATCGAGGTGGACCCGCAGCTCACCACCGC
GCAGGCCCATGAGGTAGCGGACCGCGTGGAGCGCACGCTGCAAGGCGCCTATCCGCAGGTGGTGGACGTGGTGGTCCACG
TGGAGCCGGACCGGGCCGCACTGGACATGCCCGCGTAA

Upstream 100 bases:

>100_bases
GAAGTTCCAGTTCGGCTTCTTCATGGAGATGGGCGGCGGCCCGAAGATGCGGCTGTTCCGCCAGCCCAACTGAGCACGCA
CTGAAGTACCGTGCGGCCCC

Downstream 100 bases:

>100_bases
AGACGATGGCCGCCTCCCCGACAAGGGAGGCGGCCCATGGCATCAGCCGATGCGCGGGATGCGTCAGGCCGTGGCGGCCT
TCGGCTCCGGCGTCATGTAG

Product: cation efflux family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 305; Mature: 305

Protein sequence:

>305_residues
MEATTLTDRNLAQQERNRKVRRVLLGILVANWVVASAKLIFGMLSQSAAVTADGLHSFIDGGSNVLGLVAMGVASRPADE
DHPYGHGKFEALASLGIGAMIGVGMLELGRMALDSVLNDKHPQVTGTMAAVMAFTLVVNMVVTRVERYYGRKYKSSLLLA
DASHTMSDVYVTLAVLSSLLLVWLGYPRADGLIALAVMVFVAWVAYGIVRQAVGILSDTARLDPDEVKRHTLAVPGVRSC
RDVRSRGMEESVYVDLKIEVDPQLTTAQAHEVADRVERTLQGAYPQVVDVVVHVEPDRAALDMPA

Sequences:

>Translated_305_residues
MEATTLTDRNLAQQERNRKVRRVLLGILVANWVVASAKLIFGMLSQSAAVTADGLHSFIDGGSNVLGLVAMGVASRPADE
DHPYGHGKFEALASLGIGAMIGVGMLELGRMALDSVLNDKHPQVTGTMAAVMAFTLVVNMVVTRVERYYGRKYKSSLLLA
DASHTMSDVYVTLAVLSSLLLVWLGYPRADGLIALAVMVFVAWVAYGIVRQAVGILSDTARLDPDEVKRHTLAVPGVRSC
RDVRSRGMEESVYVDLKIEVDPQLTTAQAHEVADRVERTLQGAYPQVVDVVVHVEPDRAALDMPA
>Mature_305_residues
MEATTLTDRNLAQQERNRKVRRVLLGILVANWVVASAKLIFGMLSQSAAVTADGLHSFIDGGSNVLGLVAMGVASRPADE
DHPYGHGKFEALASLGIGAMIGVGMLELGRMALDSVLNDKHPQVTGTMAAVMAFTLVVNMVVTRVERYYGRKYKSSLLLA
DASHTMSDVYVTLAVLSSLLLVWLGYPRADGLIALAVMVFVAWVAYGIVRQAVGILSDTARLDPDEVKRHTLAVPGVRSC
RDVRSRGMEESVYVDLKIEVDPQLTTAQAHEVADRVERTLQGAYPQVVDVVVHVEPDRAALDMPA

Specific function: Unknown

COG id: COG0053

COG function: function code P; Predicted Co/Zn/Cd cation transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family [H]

Homologues:

Organism=Escherichia coli, GI1790349, Length=263, Percent_Identity=28.8973384030418, Blast_Score=117, Evalue=9e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002524 [H]

Pfam domain/function: PF01545 Cation_efflux [H]

EC number: NA

Molecular weight: Translated: 32979; Mature: 32979

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEATTLTDRNLAQQERNRKVRRVLLGILVANWVVASAKLIFGMLSQSAAVTADGLHSFID
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHC
GGSNVLGLVAMGVASRPADEDHPYGHGKFEALASLGIGAMIGVGMLELGRMALDSVLNDK
CCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
HPQVTGTMAAVMAFTLVVNMVVTRVERYYGRKYKSSLLLADASHTMSDVYVTLAVLSSLL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHEEEECCHHHHHHHHHHHHHHHHHH
LVWLGYPRADGLIALAVMVFVAWVAYGIVRQAVGILSDTARLDPDEVKRHTLAVPGVRSC
HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHH
RDVRSRGMEESVYVDLKIEVDPQLTTAQAHEVADRVERTLQGAYPQVVDVVVHVEPDRAA
HHHHHCCCCCEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCHHHHHEEEEECCCCCC
LDMPA
CCCCC
>Mature Secondary Structure
MEATTLTDRNLAQQERNRKVRRVLLGILVANWVVASAKLIFGMLSQSAAVTADGLHSFID
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHC
GGSNVLGLVAMGVASRPADEDHPYGHGKFEALASLGIGAMIGVGMLELGRMALDSVLNDK
CCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
HPQVTGTMAAVMAFTLVVNMVVTRVERYYGRKYKSSLLLADASHTMSDVYVTLAVLSSLL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHEEEECCHHHHHHHHHHHHHHHHHH
LVWLGYPRADGLIALAVMVFVAWVAYGIVRQAVGILSDTARLDPDEVKRHTLAVPGVRSC
HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHH
RDVRSRGMEESVYVDLKIEVDPQLTTAQAHEVADRVERTLQGAYPQVVDVVVHVEPDRAA
HHHHHCCCCCEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCHHHHHEEEEECCCCCC
LDMPA
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]