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The map label for this gene is 108758180

Identifier: 108758180

GI number: 108758180

Start: 6188427

End: 6189464

Strand: Direct

Name: 108758180

Synonym: MXAN_4945

Alternate gene names: NA

Gene position: 6188427-6189464 (Clockwise)

Preceding gene: 108758994

Following gene: 108759969

Centisome position: 67.71

GC content: 69.56

Gene sequence:

>1038_bases
ATGAAGGCGCGTCCCATCGACAATCCGCCCAACCCCTGGGCGAGCACCGCGGTGGAGTACCTGGACGAAATCCCGCCGTC
CAAGCTGGAGGTCTTCGAGGACCACAGCCGGCAGGTGCTGTCGCACAACGACAGCCCGGACGTGGGGTTCAGTTGGAGCG
TCAACCCGTACCGGGGCTGCCTCCACGCCTGCGCGTACTGCTACGCGCGGCCCACGCACCAGTACCTGGACATGGGCGCG
GGCACCGACTTCGAGACGAAGCTGGTGGTGAAGCCCCGGGCGCCGGAGCTGCTCCGCGAGGCCTTCGAGAAACCCTCCTG
GAAGGGTGAAACCGTCGTCTTCAGCGGCGTCACCGACTGCTACCAGCCGCTGGAGGCCTCCTTACGGCTGACGCGAGGCT
GCCTGGAGGTCTGCGCCGAGTACCGCAATCCGGTGGGCATCATCACCAAGGGCGTGCTCGTCGAACGGGACTTGGACGTC
CTCCAACGGCTGGCCCGGGACGCGCGCCTGTGGGTCAGCATCAGCCTCCCCTTCCACAACGCGGAGCTGGCCCGGGCCAT
GGAGCCCTATGCCGCCTCCCCCATGCGCCGGCTGTTGACCATCCGCCGACTCACCGAGGCGGGCATCGACGTGGCGGTGT
CGGTGGCGCCCATCATCCCGGGCCTCAACGACGAGGACATCCACCGCGTGCTGGCCGCGGCACGTGAAGCCGGCGCCACC
CGCGCGCACCACATCCTGGTGCGGCTGCCCGGCCCGGTGAAGGACGTCTTCGCGGAGCGGCTGCGCGCGAAGCTGCCCCT
GCGCGCGGAACGGGTGCTCCACCGCATCCGGGAAACCCGCGGCGGGGAGCTCAACGACAGCCGCTTCAAGCACCGCATGC
GCGGTGGCGGCCTCTACGCGGAGACCATCCACCGCCTCTTCCACACGGCGGCGCGCAAGGTGGGCATCCGCGCCTCTTAC
ATCACCGAGGACGCTCCGGACACCTTCCGGCGTCCGGAGCGCAAGCCGCCGCCTACGCCGCAGCTCAGTCTCTTCTGA

Upstream 100 bases:

>100_bases
CATCCGGATGATGCACTGGGGGAACTCTCTGCAGGGGGTTCCCCTTTTTCGGTGTCGCTCGCCCCTTGACTGAACGTGCT
TTCAGGCCCACGGTGGGCGC

Downstream 100 bases:

>100_bases
GCGCGCACGCGGGCGGCGGGCGTCATTTCCGGATGGCTTGGACAATGGTGATGAGGATGACGGAGCCCACCGTCGCCACC
AGCAGTGACCAGAGGTTGAA

Product: radical SAM domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 345; Mature: 345

Protein sequence:

>345_residues
MKARPIDNPPNPWASTAVEYLDEIPPSKLEVFEDHSRQVLSHNDSPDVGFSWSVNPYRGCLHACAYCYARPTHQYLDMGA
GTDFETKLVVKPRAPELLREAFEKPSWKGETVVFSGVTDCYQPLEASLRLTRGCLEVCAEYRNPVGIITKGVLVERDLDV
LQRLARDARLWVSISLPFHNAELARAMEPYAASPMRRLLTIRRLTEAGIDVAVSVAPIIPGLNDEDIHRVLAAAREAGAT
RAHHILVRLPGPVKDVFAERLRAKLPLRAERVLHRIRETRGGELNDSRFKHRMRGGGLYAETIHRLFHTAARKVGIRASY
ITEDAPDTFRRPERKPPPTPQLSLF

Sequences:

>Translated_345_residues
MKARPIDNPPNPWASTAVEYLDEIPPSKLEVFEDHSRQVLSHNDSPDVGFSWSVNPYRGCLHACAYCYARPTHQYLDMGA
GTDFETKLVVKPRAPELLREAFEKPSWKGETVVFSGVTDCYQPLEASLRLTRGCLEVCAEYRNPVGIITKGVLVERDLDV
LQRLARDARLWVSISLPFHNAELARAMEPYAASPMRRLLTIRRLTEAGIDVAVSVAPIIPGLNDEDIHRVLAAAREAGAT
RAHHILVRLPGPVKDVFAERLRAKLPLRAERVLHRIRETRGGELNDSRFKHRMRGGGLYAETIHRLFHTAARKVGIRASY
ITEDAPDTFRRPERKPPPTPQLSLF
>Mature_345_residues
MKARPIDNPPNPWASTAVEYLDEIPPSKLEVFEDHSRQVLSHNDSPDVGFSWSVNPYRGCLHACAYCYARPTHQYLDMGA
GTDFETKLVVKPRAPELLREAFEKPSWKGETVVFSGVTDCYQPLEASLRLTRGCLEVCAEYRNPVGIITKGVLVERDLDV
LQRLARDARLWVSISLPFHNAELARAMEPYAASPMRRLLTIRRLTEAGIDVAVSVAPIIPGLNDEDIHRVLAAAREAGAT
RAHHILVRLPGPVKDVFAERLRAKLPLRAERVLHRIRETRGGELNDSRFKHRMRGGGLYAETIHRLFHTAARKVGIRASY
ITEDAPDTFRRPERKPPPTPQLSLF

Specific function: Unknown

COG id: COG1533

COG function: function code L; DNA repair photolyase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR006638
- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 38887; Mature: 38887

Theoretical pI: Translated: 9.16; Mature: 9.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKARPIDNPPNPWASTAVEYLDEIPPSKLEVFEDHSRQVLSHNDSPDVGFSWSVNPYRGC
CCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCEEECCCHHHHH
LHACAYCYARPTHQYLDMGAGTDFETKLVVKPRAPELLREAFEKPSWKGETVVFSGVTDC
HHHHHHHHCCCCHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHCCCCCCCEEEECCCHHH
YQPLEASLRLTRGCLEVCAEYRNPVGIITKGVLVERDLDVLQRLARDARLWVSISLPFHN
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHCCEEEEEEECCCCC
AELARAMEPYAASPMRRLLTIRRLTEAGIDVAVSVAPIIPGLNDEDIHRVLAAAREAGAT
HHHHHHHCCHHHHHHHHHHHHHHHHHHCCCEEEEHHHHCCCCCHHHHHHHHHHHHHHCCC
RAHHILVRLPGPVKDVFAERLRAKLPLRAERVLHRIRETRGGELNDSRFKHRMRGGGLYA
CCEEEEEECCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHH
ETIHRLFHTAARKVGIRASYITEDAPDTFRRPERKPPPTPQLSLF
HHHHHHHHHHHHHHCCCHHHCCCCCCHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKARPIDNPPNPWASTAVEYLDEIPPSKLEVFEDHSRQVLSHNDSPDVGFSWSVNPYRGC
CCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCEEECCCHHHHH
LHACAYCYARPTHQYLDMGAGTDFETKLVVKPRAPELLREAFEKPSWKGETVVFSGVTDC
HHHHHHHHCCCCHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHCCCCCCCEEEECCCHHH
YQPLEASLRLTRGCLEVCAEYRNPVGIITKGVLVERDLDVLQRLARDARLWVSISLPFHN
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHCCEEEEEEECCCCC
AELARAMEPYAASPMRRLLTIRRLTEAGIDVAVSVAPIIPGLNDEDIHRVLAAAREAGAT
HHHHHHHCCHHHHHHHHHHHHHHHHHHCCCEEEEHHHHCCCCCHHHHHHHHHHHHHHCCC
RAHHILVRLPGPVKDVFAERLRAKLPLRAERVLHRIRETRGGELNDSRFKHRMRGGGLYA
CCEEEEEECCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHH
ETIHRLFHTAARKVGIRASYITEDAPDTFRRPERKPPPTPQLSLF
HHHHHHHHHHHHHHCCCHHHCCCCCCHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]