| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is dys1 [H]
Identifier: 108758175
GI number: 108758175
Start: 1985910
End: 1986932
Strand: Direct
Name: dys1 [H]
Synonym: MXAN_1678
Alternate gene names: 108758175
Gene position: 1985910-1986932 (Clockwise)
Preceding gene: 108763577
Following gene: 108763878
Centisome position: 21.73
GC content: 63.34
Gene sequence:
>1023_bases ATGTCCTCGTCCGAACTTCCCGTTCTCAAGTTCGTCCTCACGAACTACAAGAATTTCAACGCGCGCGCGACGCGCGATGC GCTCCTGTCCTACTGGGAGCATGTGTCGAACGGTGGCCGGATGTTCTGGAGCGTCGCGGGCGCGATGTCGTCGGCGCAGC TCGGCATCACGCTCGCACCGGCCATCCGGGCGGGGCTGATTCACGGTCTGTCGGTGACGGGCGCCAACATCGAGGAGTCG CTCTTCCGGCTCGTCGCGCATACGGGGTACAAGGACTTCCCGGAGTACCGCTACTTCACCAAGCAGGACGACACGCGAAT CCTCGAGCAGCGGATGCGCCGGGTCACCGATACGAGCATCCCCGAGGACGAGGCGTTCCGCGCGGTGGAGAAGATTGCCG TTCCGATGTGGAAGGGCGCGACCGAGAAGGGCGAGCGCCGCTTCTGGCACGAGTACTTCTACGCGTTCATCCAGGCGCTC GACCCCTCCGTGTATGAGGGTGACCCGGAGGCCTGCTGGCTGCTCGAGGCGGCGCGGCTCCGTCTGCCCATCGTCGTCCC TGGCTATGAGGACTCGACGTTCGGCAACATCTTCGCGTCCTACGTGAAGGCGGGCGACTTCAACGCGAGCATCGTCAAGT CTGGCATTGAGTACATGGCCGACTTCTACGACCGCTACGAGGAGATGTCCGAGGGCCGGGGTGTCGGCTTCTTCCAGATT GGCGGCGGTATCGCCGGTGACTTCCCCATCTGCGTCGTTCCTTCGATCAAGTACGACCTGCAGAAGCCGGTGAAGCCCTG GGCCTACTTCTGCCAGATCAGCGACTCGACGACGTCCTACGGTTCGTACTCGGGCGCGACGCCCAATGAGAAGATCACCT GGGACAAGCTGACCGAGACGACGCCGATGTTCGTCATCGAGTCGGATGCCACCATTGTCGCGCCGCTGATTCTCAGCGCC CTGCTCGAGTGCAAGAGCAACCCGGAAGCGGCGAACGCGCTCATCGCGAAGCACCAGGGCTAG
Upstream 100 bases:
>100_bases TGGCGGCCGCGACATCTCGTTGCGACCGTAGGGTGTCCTCGAGTGGCTCTGTCAGGCGTGTGCCTCTCGAGCATTCACCA CGTTGTTGCTGGAGGCTCAC
Downstream 100 bases:
>100_bases CCGTCGCAGCAGGCGGGGCGGCTCGCGCCGCTCCGCACGTGGGAATGGCGTGACGCTGCCACGACGCACGGGATGCCGTG CGTCGCGGTCCCCCAGTCAG
Product: deoxyhypusine synthase family protein
Products: NA
Alternate protein names: DHS 1 [H]
Number of amino acids: Translated: 340; Mature: 339
Protein sequence:
>340_residues MSSSELPVLKFVLTNYKNFNARATRDALLSYWEHVSNGGRMFWSVAGAMSSAQLGITLAPAIRAGLIHGLSVTGANIEES LFRLVAHTGYKDFPEYRYFTKQDDTRILEQRMRRVTDTSIPEDEAFRAVEKIAVPMWKGATEKGERRFWHEYFYAFIQAL DPSVYEGDPEACWLLEAARLRLPIVVPGYEDSTFGNIFASYVKAGDFNASIVKSGIEYMADFYDRYEEMSEGRGVGFFQI GGGIAGDFPICVVPSIKYDLQKPVKPWAYFCQISDSTTSYGSYSGATPNEKITWDKLTETTPMFVIESDATIVAPLILSA LLECKSNPEAANALIAKHQG
Sequences:
>Translated_340_residues MSSSELPVLKFVLTNYKNFNARATRDALLSYWEHVSNGGRMFWSVAGAMSSAQLGITLAPAIRAGLIHGLSVTGANIEES LFRLVAHTGYKDFPEYRYFTKQDDTRILEQRMRRVTDTSIPEDEAFRAVEKIAVPMWKGATEKGERRFWHEYFYAFIQAL DPSVYEGDPEACWLLEAARLRLPIVVPGYEDSTFGNIFASYVKAGDFNASIVKSGIEYMADFYDRYEEMSEGRGVGFFQI GGGIAGDFPICVVPSIKYDLQKPVKPWAYFCQISDSTTSYGSYSGATPNEKITWDKLTETTPMFVIESDATIVAPLILSA LLECKSNPEAANALIAKHQG >Mature_339_residues SSSELPVLKFVLTNYKNFNARATRDALLSYWEHVSNGGRMFWSVAGAMSSAQLGITLAPAIRAGLIHGLSVTGANIEESL FRLVAHTGYKDFPEYRYFTKQDDTRILEQRMRRVTDTSIPEDEAFRAVEKIAVPMWKGATEKGERRFWHEYFYAFIQALD PSVYEGDPEACWLLEAARLRLPIVVPGYEDSTFGNIFASYVKAGDFNASIVKSGIEYMADFYDRYEEMSEGRGVGFFQIG GGIAGDFPICVVPSIKYDLQKPVKPWAYFCQISDSTTSYGSYSGATPNEKITWDKLTETTPMFVIESDATIVAPLILSAL LECKSNPEAANALIAKHQG
Specific function: Catalyzes the NAD-dependent oxidative cleavage of spermidine and the subsequent transfer of the butylamine moiety of spermidine to the epsilon-amino group of a specific lysine residue of the eIF-5A precursor protein to form the intermediate deoxyhypusine
COG id: COG1899
COG function: function code O; Deoxyhypusine synthase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the deoxyhypusine synthase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002773 - InterPro: IPR022899 [H]
Pfam domain/function: PF01916 DS [H]
EC number: =2.5.1.46 [H]
Molecular weight: Translated: 37963; Mature: 37832
Theoretical pI: Translated: 4.99; Mature: 4.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSSELPVLKFVLTNYKNFNARATRDALLSYWEHVSNGGRMFWSVAGAMSSAQLGITLAP CCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEHHHCCCCCCCCEEEHH AIRAGLIHGLSVTGANIEESLFRLVAHTGYKDFPEYRYFTKQDDTRILEQRMRRVTDTSI HHHHHHHHCCEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCC PEDEAFRAVEKIAVPMWKGATEKGERRFWHEYFYAFIQALDPSVYEGDPEACWLLEAARL CHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH RLPIVVPGYEDSTFGNIFASYVKAGDFNASIVKSGIEYMADFYDRYEEMSEGRGVGFFQI CCCEEECCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEE GGGIAGDFPICVVPSIKYDLQKPVKPWAYFCQISDSTTSYGSYSGATPNEKITWDKLTET CCCCCCCCCEEEECCCCHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCEEHHHHCCC TPMFVIESDATIVAPLILSALLECKSNPEAANALIAKHQG CCEEEEECCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCC >Mature Secondary Structure SSSELPVLKFVLTNYKNFNARATRDALLSYWEHVSNGGRMFWSVAGAMSSAQLGITLAP CCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEHHHCCCCCCCCEEEHH AIRAGLIHGLSVTGANIEESLFRLVAHTGYKDFPEYRYFTKQDDTRILEQRMRRVTDTSI HHHHHHHHCCEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCC PEDEAFRAVEKIAVPMWKGATEKGERRFWHEYFYAFIQALDPSVYEGDPEACWLLEAARL CHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH RLPIVVPGYEDSTFGNIFASYVKAGDFNASIVKSGIEYMADFYDRYEEMSEGRGVGFFQI CCCEEECCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEE GGGIAGDFPICVVPSIKYDLQKPVKPWAYFCQISDSTTSYGSYSGATPNEKITWDKLTET CCCCCCCCCEEEECCCCHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCEEHHHHCCC TPMFVIESDATIVAPLILSALLECKSNPEAANALIAKHQG CCEEEEECCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11932238 [H]