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The map label for this gene is 108757971

Identifier: 108757971

GI number: 108757971

Start: 6375397

End: 6375948

Strand: Reverse

Name: 108757971

Synonym: MXAN_5101

Alternate gene names: NA

Gene position: 6375948-6375397 (Counterclockwise)

Preceding gene: 108757003

Following gene: 108760403

Centisome position: 69.76

GC content: 70.83

Gene sequence:

>552_bases
ATGTCGGAGCTGACAGAGCTACTGGACCACGCGCGCAAGGGCGAGCAGGGCGCGCGGGATGCGTTGATGGCGGCGGCCTA
CCAGGAGCTGCGGGACATGGTTCAGCGGGCCATGTCCGATGCGGCGTCGACGCCGTCACTTCAACCCGCGGTGTTGGTGA
AGGAGGCCTGGCTGCGCCTGTTCAGCGCGGGGGCTCCGGTGGAGGCGCGGCGTCACTTCTTCAGCGCCGCGGCGCAGGCC
ATGCGGCGGGTGATGGTGGACCGGGTGCGGCTGCGCAGGGCGCAGGTCCGAGAGGCCCGGCTGGAGCGGGTGAGCCTGGG
GGACGTGGAGGCGGATGTCCCGGCGGGTTTGAGCCTGGAGGTGCTGGAGTTGGACCGAGCACTCTCGGAGCTGGACACGT
TCCAGCCGCGGCTCGCGCGCATGCTGGAGCTGCGCTACTTCGTGGGCCTGGACCTGCTGGACACCGCCGCGGTGCTGAGC
GTGTCGCCCGTCACGGTCAAGCGCGACTGGGCCTACGTCCGGGAGTGGCTGCTGACGCGGCTGGGCAACTGA

Upstream 100 bases:

>100_bases
CACCGTGAGGGGTACCTGCCCCAGTTTTCCAAGATTTCTCGTTGAGAGCGTAGTTTCTGTGAGGGCGGCGAACCCGTCTG
GCCTGGAGGTGAATGTGGGC

Downstream 100 bases:

>100_bases
CGGCCCGCGCGTCCACGCGGGCCGGGTTGGAATCAGGGGGCGTCGGGCTCAGCGCTTGACGGCCGCCGCCACCGCGTCCG
CGAGCGGCGTCGTGGGCCGC

Product: RNA polymerase ECF-subfamily sigma factor

Products: NA

Alternate protein names: Sigma Factor ECF-Like Family Protein; RNA Polymerase Sigma Factor; Sigma Factor; ECF Family RNA Polymerase Sigma Factor; RNA Polymerase Sigma-E Factor; Extracytoplasmic Sigma Factor ECF; RNA Polymerase ECF-Subfamily Sigma Factor; RNA Polymerase Sigma-24 Subunit ECF Subfamily

Number of amino acids: Translated: 183; Mature: 182

Protein sequence:

>183_residues
MSELTELLDHARKGEQGARDALMAAAYQELRDMVQRAMSDAASTPSLQPAVLVKEAWLRLFSAGAPVEARRHFFSAAAQA
MRRVMVDRVRLRRAQVREARLERVSLGDVEADVPAGLSLEVLELDRALSELDTFQPRLARMLELRYFVGLDLLDTAAVLS
VSPVTVKRDWAYVREWLLTRLGN

Sequences:

>Translated_183_residues
MSELTELLDHARKGEQGARDALMAAAYQELRDMVQRAMSDAASTPSLQPAVLVKEAWLRLFSAGAPVEARRHFFSAAAQA
MRRVMVDRVRLRRAQVREARLERVSLGDVEADVPAGLSLEVLELDRALSELDTFQPRLARMLELRYFVGLDLLDTAAVLS
VSPVTVKRDWAYVREWLLTRLGN
>Mature_182_residues
SELTELLDHARKGEQGARDALMAAAYQELRDMVQRAMSDAASTPSLQPAVLVKEAWLRLFSAGAPVEARRHFFSAAAQAM
RRVMVDRVRLRRAQVREARLERVSLGDVEADVPAGLSLEVLELDRALSELDTFQPRLARMLELRYFVGLDLLDTAAVLSV
SPVTVKRDWAYVREWLLTRLGN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20590; Mature: 20459

Theoretical pI: Translated: 7.69; Mature: 7.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSELTELLDHARKGEQGARDALMAAAYQELRDMVQRAMSDAASTPSLQPAVLVKEAWLRL
CCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
FSAGAPVEARRHFFSAAAQAMRRVMVDRVRLRRAQVREARLERVSLGDVEADVPAGLSLE
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHH
VLELDRALSELDTFQPRLARMLELRYFVGLDLLDTAAVLSVSPVTVKRDWAYVREWLLTR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
LGN
HCC
>Mature Secondary Structure 
SELTELLDHARKGEQGARDALMAAAYQELRDMVQRAMSDAASTPSLQPAVLVKEAWLRL
CHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
FSAGAPVEARRHFFSAAAQAMRRVMVDRVRLRRAQVREARLERVSLGDVEADVPAGLSLE
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHH
VLELDRALSELDTFQPRLARMLELRYFVGLDLLDTAAVLSVSPVTVKRDWAYVREWLLTR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
LGN
HCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA