| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is dgk [H]
Identifier: 108757889
GI number: 108757889
Start: 2386086
End: 2386730
Strand: Direct
Name: dgk [H]
Synonym: MXAN_2054
Alternate gene names: 108757889
Gene position: 2386086-2386730 (Clockwise)
Preceding gene: 108758752
Following gene: 108756848
Centisome position: 26.11
GC content: 62.79
Gene sequence:
>645_bases ATGGACTACCGGTATATCGTGGTGGAAGGGCCCATTGGCGTGGGCAAGACGAGCCTCTCCAATATCCTCGCGGAGCGTCT GGCGGGACGGCGCATCCTCGAAGTGGTGGAGGAGAACCCCTTCCTGTCCAGCTTCTACACGGACCGGCAGAAGTTCGCGT TCCAGACGCAGATCTTCTTCCTGCTGTCGCGCTTCCGTCAGCAGCAGGAGCTGTTCCAGCAGGACCTCTTCAGCTCGATG ACGGTCAGCGACTACCTGTTCGCCAAGGACCGCATCTTCGCGCACCTCAACCTGGACGCGCACGAGCTGGCCCTCTACGA GCGCGTCTTCGAGGCGCTGGGGCCCCGCGTGGCCAAGCCGGACCTGGTCATCTACCTCCAGGCCCGACTGGACGTGCTCC TGCACCGCATCAAGAAGCGCGGCCGGGAGTTCGAGCGCAAGTTCGACCCCACGTACCTGGAGGGGCTCGTCCACTCCTAC AACAACTTCTTCTTCCACTACACGGACACCCCGCTCCTCGTCGTGGATACCTCCGACATCGACTTCGTGAATGTCGAGGC AGACAGGGAAGACCTGCTTGCCACCATCCGGAAGGCGAAGCCGGGCACGCAGCATTACGTTCCGAAGGCTTCCCGCCGGG GCTGA
Upstream 100 bases:
>100_bases CCGTGTTGTGTTATCCGCCCGCGTGCGTGGCCGCGCCTTCGCGCGATGTCTCGCGCGCGCGGTCTCAAAGCGCATTCCGC GGGCGGGAGGCCTCGGGCGG
Downstream 100 bases:
>100_bases AAGTCAGGCTCCTGGTGGGACGTCCGCCTTCAACCTCCCCACGGCCGGCGCGGTGGCGTTAGAGTGCGGTGGCGGGCCCA GGGCTCCCGGCGATCCCCGG
Product: deoxynucleoside kinase family protein
Products: NA
Alternate protein names: DGUO kinase; dGK [H]
Number of amino acids: Translated: 214; Mature: 214
Protein sequence:
>214_residues MDYRYIVVEGPIGVGKTSLSNILAERLAGRRILEVVEENPFLSSFYTDRQKFAFQTQIFFLLSRFRQQQELFQQDLFSSM TVSDYLFAKDRIFAHLNLDAHELALYERVFEALGPRVAKPDLVIYLQARLDVLLHRIKKRGREFERKFDPTYLEGLVHSY NNFFFHYTDTPLLVVDTSDIDFVNVEADREDLLATIRKAKPGTQHYVPKASRRG
Sequences:
>Translated_214_residues MDYRYIVVEGPIGVGKTSLSNILAERLAGRRILEVVEENPFLSSFYTDRQKFAFQTQIFFLLSRFRQQQELFQQDLFSSM TVSDYLFAKDRIFAHLNLDAHELALYERVFEALGPRVAKPDLVIYLQARLDVLLHRIKKRGREFERKFDPTYLEGLVHSY NNFFFHYTDTPLLVVDTSDIDFVNVEADREDLLATIRKAKPGTQHYVPKASRRG >Mature_214_residues MDYRYIVVEGPIGVGKTSLSNILAERLAGRRILEVVEENPFLSSFYTDRQKFAFQTQIFFLLSRFRQQQELFQQDLFSSM TVSDYLFAKDRIFAHLNLDAHELALYERVFEALGPRVAKPDLVIYLQARLDVLLHRIKKRGREFERKFDPTYLEGLVHSY NNFFFHYTDTPLLVVDTSDIDFVNVEADREDLLATIRKAKPGTQHYVPKASRRG
Specific function: Plays an essential role in generating the deoxyribonucleotide precursors dGTP for DNA metabolism. Highly specific toward deoxyguanosine (dGuo) and deoxyinosine (dIno). Only marginal activity is observed with guanosine. UTP is slightly more efficient as ph
COG id: COG1428
COG function: function code F; Deoxynucleoside kinases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the DCK/DGK family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002624 [H]
Pfam domain/function: PF01712 dNK [H]
EC number: =2.7.1.113 [H]
Molecular weight: Translated: 25048; Mature: 25048
Theoretical pI: Translated: 7.90; Mature: 7.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDYRYIVVEGPIGVGKTSLSNILAERLAGRRILEVVEENPFLSSFYTDRQKFAFQTQIFF CCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH LLSRFRQQQELFQQDLFSSMTVSDYLFAKDRIFAHLNLDAHELALYERVFEALGPRVAKP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHCCCCCCC DLVIYLQARLDVLLHRIKKRGREFERKFDPTYLEGLVHSYNNFFFHYTDTPLLVVDTSDI CEEEEHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCEEEEECCCEEEEEECCCC DFVNVEADREDLLATIRKAKPGTQHYVPKASRRG CEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure MDYRYIVVEGPIGVGKTSLSNILAERLAGRRILEVVEENPFLSSFYTDRQKFAFQTQIFF CCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH LLSRFRQQQELFQQDLFSSMTVSDYLFAKDRIFAHLNLDAHELALYERVFEALGPRVAKP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHCCCCCCC DLVIYLQARLDVLLHRIKKRGREFERKFDPTYLEGLVHSYNNFFFHYTDTPLLVVDTSDI CEEEEHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCEEEEECCCEEEEEECCCC DFVNVEADREDLLATIRKAKPGTQHYVPKASRRG CEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7584024; 9384377 [H]