| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108757886
Identifier: 108757886
GI number: 108757886
Start: 761024
End: 761797
Strand: Reverse
Name: 108757886
Synonym: MXAN_0661
Alternate gene names: NA
Gene position: 761797-761024 (Counterclockwise)
Preceding gene: 108759389
Following gene: 108762807
Centisome position: 8.33
GC content: 67.57
Gene sequence:
>774_bases ATGATTCCCATCAGCGACGACAACCCCACCCTCCGCACTCCCGTCGTGACATACCTGCTGCTCGGCACCATCGGCTTCGT CTGGGTCTTCATCCAGGGCGCGGGCCTGGACGCCTACCGGCTGGCCGCCAGCGTCTGCAACCTGGGCATGGTGCCGGGCG AGCTGACGGGCAAGGCGGCGCTGGGCCTCCCCGTTCCCCTGGGAGATGGGCTGACGTGCGTGGTGGACAACGAGCCCATC AACCTCCTCACCCCCATCACCTCCATGTTCCTACACGGCGGCTGGGGACACCTGCTGGGCAACTGCCTCTTCTTCTGGGT CTTCGGCAACAACGTCGAGGACAGCATGGGCCGCCTGCGCTTCGTGGTGTTCTACCTGCTGTGCGGACTGGCCGCGGCGG CGGCGCACCTGCTGGTGGACCCGGGCTCGCCGGTGCCCACGGTGGGCGCGTCCGGCGCCATCTCCGGCGTCATGGGCGCG TACCTGCTGCTCTATCCACGGGTGCGGGTGAACATGCTGTTCATCATCGTCATCTTCATCCGCGTCTTCCCCGTGCCCGC GTGGGCGGTGCTGCTGTGGTGGTTCGGCGTGCAGCTCTTCAGCGGCCTGCCCCAGCTCAACACGGTCAGCGCGGAGGCGT CCGGCGGCGTCGCCTTCTGGGCGCACATCGGTGGCTTCGTGGCGGGCATGGCGCTCATCAAGCTGTTCCAGAACACGCGC TACACGAACCAGCGCACGTCGATGCGCCACCGGCTCCATCCCAACCATCCGTGA
Upstream 100 bases:
>100_bases CCGCTCCGTCCGTATGGGTGCCCATGCGTCCAGCGCCGCACATCCAGGCCCCCTCCGCCGCCGCGCCCGGCCAGGGGAAC GCGCATGATGGGGCCCCCAC
Downstream 100 bases:
>100_bases GGGGGGCTGACTTTTTCCGCATCCGTGAATTGCCAGACTTCGTGAACCGCTGCGTATCCAGGCTGCTGGGGCCAGACACC CGAAGGAAGCGCAGATGCGG
Product: S54 family peptidase
Products: NA
Alternate protein names: Integral Membrane Protein; Peptidase; Rhomboid-Like Protein; S54 Family Peptidase; Peptidase Protein; LOW QUALITY PROTEIN Integral Membrane Protein; Transmembrane Rhomboid Family Protein; Serine Protease; Subfamily; Rhomboid Serine Protease; Membrane Associated Serine Protease; Rhomboid Family Membrane Protein; Integral Membrane Rhomboid Family Protein; Regulatory Proteins IclR
Number of amino acids: Translated: 257; Mature: 257
Protein sequence:
>257_residues MIPISDDNPTLRTPVVTYLLLGTIGFVWVFIQGAGLDAYRLAASVCNLGMVPGELTGKAALGLPVPLGDGLTCVVDNEPI NLLTPITSMFLHGGWGHLLGNCLFFWVFGNNVEDSMGRLRFVVFYLLCGLAAAAAHLLVDPGSPVPTVGASGAISGVMGA YLLLYPRVRVNMLFIIVIFIRVFPVPAWAVLLWWFGVQLFSGLPQLNTVSAEASGGVAFWAHIGGFVAGMALIKLFQNTR YTNQRTSMRHRLHPNHP
Sequences:
>Translated_257_residues MIPISDDNPTLRTPVVTYLLLGTIGFVWVFIQGAGLDAYRLAASVCNLGMVPGELTGKAALGLPVPLGDGLTCVVDNEPI NLLTPITSMFLHGGWGHLLGNCLFFWVFGNNVEDSMGRLRFVVFYLLCGLAAAAAHLLVDPGSPVPTVGASGAISGVMGA YLLLYPRVRVNMLFIIVIFIRVFPVPAWAVLLWWFGVQLFSGLPQLNTVSAEASGGVAFWAHIGGFVAGMALIKLFQNTR YTNQRTSMRHRLHPNHP >Mature_257_residues MIPISDDNPTLRTPVVTYLLLGTIGFVWVFIQGAGLDAYRLAASVCNLGMVPGELTGKAALGLPVPLGDGLTCVVDNEPI NLLTPITSMFLHGGWGHLLGNCLFFWVFGNNVEDSMGRLRFVVFYLLCGLAAAAAHLLVDPGSPVPTVGASGAISGVMGA YLLLYPRVRVNMLFIIVIFIRVFPVPAWAVLLWWFGVQLFSGLPQLNTVSAEASGGVAFWAHIGGFVAGMALIKLFQNTR YTNQRTSMRHRLHPNHP
Specific function: Unknown
COG id: COG0705
COG function: function code R; Uncharacterized membrane protein (homolog of Drosophila rhomboid)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27747; Mature: 27747
Theoretical pI: Translated: 8.34; Mature: 8.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIPISDDNPTLRTPVVTYLLLGTIGFVWVFIQGAGLDAYRLAASVCNLGMVPGELTGKAA CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCEE LGLPVPLGDGLTCVVDNEPINLLTPITSMFLHGGWGHLLGNCLFFWVFGNNVEDSMGRLR CCCCCCCCCCCEEEECCCCCHHHHHHHHHHHCCCHHHHHHHHHEEEEECCCHHHHHHHHH FVVFYLLCGLAAAAAHLLVDPGSPVPTVGASGAISGVMGAYLLLYPRVRVNMLFIIVIFI HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RVFPVPAWAVLLWWFGVQLFSGLPQLNTVSAEASGGVAFWAHIGGFVAGMALIKLFQNTR HHHCCHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC YTNQRTSMRHRLHPNHP CCCHHHHHHHCCCCCCC >Mature Secondary Structure MIPISDDNPTLRTPVVTYLLLGTIGFVWVFIQGAGLDAYRLAASVCNLGMVPGELTGKAA CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCEE LGLPVPLGDGLTCVVDNEPINLLTPITSMFLHGGWGHLLGNCLFFWVFGNNVEDSMGRLR CCCCCCCCCCCEEEECCCCCHHHHHHHHHHHCCCHHHHHHHHHEEEEECCCHHHHHHHHH FVVFYLLCGLAAAAAHLLVDPGSPVPTVGASGAISGVMGAYLLLYPRVRVNMLFIIVIFI HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RVFPVPAWAVLLWWFGVQLFSGLPQLNTVSAEASGGVAFWAHIGGFVAGMALIKLFQNTR HHHCCHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC YTNQRTSMRHRLHPNHP CCCHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA