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The map label for this gene is ybaC [H]

Identifier: 108757884

GI number: 108757884

Start: 2014084

End: 2015217

Strand: Reverse

Name: ybaC [H]

Synonym: MXAN_1699

Alternate gene names: 108757884

Gene position: 2015217-2014084 (Counterclockwise)

Preceding gene: 108761662

Following gene: 108757401

Centisome position: 22.05

GC content: 66.93

Gene sequence:

>1134_bases
GTGATGCGCAAAGAATCGTGGCTACCGTTGGCGGTGCTGCTTCTGGCGAGCATTCAGGCACAGGCGCAGGAGGCGCCGGG
CCCTCGTGACCGGGCCGAGGCTGTCAAGATCATCGCGGAGCTCCGCAAGATCGTGGCGCCCGAGGGGATGGAGCGCACCG
AGAAGCTCCGCCTCGGAGGCATTGACCAATGGGTCTCGATCCGCAGCCGCGACCTACGCAATCCGGTGCTGCTCGTGCTC
CATGGCGGCCCCGGCTGGGTGGCGATGCCGACGAGTTGGTATTTCGCGCACGGCTGGGACGAATTCTTCACCGTCATCCA
ATGGGACCAGCGCGGCGCGGGCAAGACGTATGTCGCGAACGATCCGGCCACGGTCGCCCCGACGCTCACCGTCGAGCAGG
TGCACGCCGATGCCGAGGAGCTCGTCAAATGGGCGCGCCAGACCTTCGGCAAGGAGAAGATCTTCGTCCTCGGCCATAGT
TGGGGGAGCCTCCTCGGGCTCACCCTCGCGGAGAGGCACCCCGAATGGCTCCACGCCTATATCGGCGCCGCCCAGGGCAT
CGATGCGCGGGAGAGCGAGCGGCGCGGCTGGGCCTGGGCGATGGAACAGGCGCGCGCGGAGAAGAACGCAGAGGCGATCC
GCGACCTCGACTCAATCGCGCCCTATGCCGTTGGCAAGACGCCGGTGCCGTTGAAGGACATCCAGCTCCAGCGCCGCTGG
CTCAATTTCTTCGGGGGTGCCGCCTATCGGCGTCCCGATGCGAGCTTCGAGGGCGCAGCGGTGAATCTGTCGCCCGAATA
CACCGACGAGGAGGTACGCCAGGTCTGGAAGGCGCAGGATTTCTCGGTCGAGAGGCTCCTTGCCGCGATACTGACGGCGG
ACCTATCGCATGTGAAGCGGCTGAAGACGCCGCTGCTCCTGTTCCTCGGACGCCACGACCGCAACGTCTCGGCGATGGTT
GCCGCCGAATGGTTCGCGGGCGTCAAGGCGCCGTCGAAGCGACTCGTCTGGTTCGAGCAGTCGGCGCACGAGCTGATGGC
CGAGGAGCCGGGCAAGGTGCTGCTCTCACTCGTCCGCTATGCCCGTCCGATCGCCGAGCGCGCCGGCGATGTCGCGCCCG
CCAGCACCCAATAG

Upstream 100 bases:

>100_bases
CTCACCGGTGGCGGAGTCAGAGCGTCCATGAGCGGCCGGGCAGTGCCTCGGTGATAAGGCTTGTAATATCCACGGAAATC
ACGAACAGAATCGAGGGGGA

Downstream 100 bases:

>100_bases
AGCAGGCCACAGCGAGGAAGTGAGGCTGCAGCCAAGCCCCTGTCTCCTCCATCTCCGCCGCGAGCTGACCAGGCGCACGT
CGCGCGCCTGCGCCCTTGCG

Product: alpha/beta fold family hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 377; Mature: 377

Protein sequence:

>377_residues
MMRKESWLPLAVLLLASIQAQAQEAPGPRDRAEAVKIIAELRKIVAPEGMERTEKLRLGGIDQWVSIRSRDLRNPVLLVL
HGGPGWVAMPTSWYFAHGWDEFFTVIQWDQRGAGKTYVANDPATVAPTLTVEQVHADAEELVKWARQTFGKEKIFVLGHS
WGSLLGLTLAERHPEWLHAYIGAAQGIDARESERRGWAWAMEQARAEKNAEAIRDLDSIAPYAVGKTPVPLKDIQLQRRW
LNFFGGAAYRRPDASFEGAAVNLSPEYTDEEVRQVWKAQDFSVERLLAAILTADLSHVKRLKTPLLLFLGRHDRNVSAMV
AAEWFAGVKAPSKRLVWFEQSAHELMAEEPGKVLLSLVRYARPIAERAGDVAPASTQ

Sequences:

>Translated_377_residues
MMRKESWLPLAVLLLASIQAQAQEAPGPRDRAEAVKIIAELRKIVAPEGMERTEKLRLGGIDQWVSIRSRDLRNPVLLVL
HGGPGWVAMPTSWYFAHGWDEFFTVIQWDQRGAGKTYVANDPATVAPTLTVEQVHADAEELVKWARQTFGKEKIFVLGHS
WGSLLGLTLAERHPEWLHAYIGAAQGIDARESERRGWAWAMEQARAEKNAEAIRDLDSIAPYAVGKTPVPLKDIQLQRRW
LNFFGGAAYRRPDASFEGAAVNLSPEYTDEEVRQVWKAQDFSVERLLAAILTADLSHVKRLKTPLLLFLGRHDRNVSAMV
AAEWFAGVKAPSKRLVWFEQSAHELMAEEPGKVLLSLVRYARPIAERAGDVAPASTQ
>Mature_377_residues
MMRKESWLPLAVLLLASIQAQAQEAPGPRDRAEAVKIIAELRKIVAPEGMERTEKLRLGGIDQWVSIRSRDLRNPVLLVL
HGGPGWVAMPTSWYFAHGWDEFFTVIQWDQRGAGKTYVANDPATVAPTLTVEQVHADAEELVKWARQTFGKEKIFVLGHS
WGSLLGLTLAERHPEWLHAYIGAAQGIDARESERRGWAWAMEQARAEKNAEAIRDLDSIAPYAVGKTPVPLKDIQLQRRW
LNFFGGAAYRRPDASFEGAAVNLSPEYTDEEVRQVWKAQDFSVERLLAAILTADLSHVKRLKTPLLLFLGRHDRNVSAMV
AAEWFAGVKAPSKRLVWFEQSAHELMAEEPGKVLLSLVRYARPIAERAGDVAPASTQ

Specific function: Probable aminopeptidase [H]

COG id: COG0596

COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase S33 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000073
- InterPro:   IPR002410 [H]

Pfam domain/function: PF00561 Abhydrolase_1 [H]

EC number: NA

Molecular weight: Translated: 42236; Mature: 42236

Theoretical pI: Translated: 8.00; Mature: 8.00

Prosite motif: PS00120 LIPASE_SER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMRKESWLPLAVLLLASIQAQAQEAPGPRDRAEAVKIIAELRKIVAPEGMERTEKLRLGG
CCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCC
IDQWVSIRSRDLRNPVLLVLHGGPGWVAMPTSWYFAHGWDEFFTVIQWDQRGAGKTYVAN
HHHHHHHHHHCCCCCEEEEEECCCCEEECCCCCHHHCCHHHHHHHHEECCCCCCCEEEEC
DPATVAPTLTVEQVHADAEELVKWARQTFGKEKIFVLGHSWGSLLGLTLAERHPEWLHAY
CCCCCCCCEEHHHHHCCHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHCHHHHHHH
IGAAQGIDARESERRGWAWAMEQARAEKNAEAIRDLDSIAPYAVGKTPVPLKDIQLQRRW
HHHHCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH
LNFFGGAAYRRPDASFEGAAVNLSPEYTDEEVRQVWKAQDFSVERLLAAILTADLSHVKR
HHHHCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
LKTPLLLFLGRHDRNVSAMVAAEWFAGVKAPSKRLVWFEQSAHELMAEEPGKVLLSLVRY
HHHHHEEEECCCCCCHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHCCHHHHHHHHHHH
ARPIAERAGDVAPASTQ
HHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MMRKESWLPLAVLLLASIQAQAQEAPGPRDRAEAVKIIAELRKIVAPEGMERTEKLRLGG
CCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCC
IDQWVSIRSRDLRNPVLLVLHGGPGWVAMPTSWYFAHGWDEFFTVIQWDQRGAGKTYVAN
HHHHHHHHHHCCCCCEEEEEECCCCEEECCCCCHHHCCHHHHHHHHEECCCCCCCEEEEC
DPATVAPTLTVEQVHADAEELVKWARQTFGKEKIFVLGHSWGSLLGLTLAERHPEWLHAY
CCCCCCCCEEHHHHHCCHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHCHHHHHHH
IGAAQGIDARESERRGWAWAMEQARAEKNAEAIRDLDSIAPYAVGKTPVPLKDIQLQRRW
HHHHCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH
LNFFGGAAYRRPDASFEGAAVNLSPEYTDEEVRQVWKAQDFSVERLLAAILTADLSHVKR
HHHHCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
LKTPLLLFLGRHDRNVSAMVAAEWFAGVKAPSKRLVWFEQSAHELMAEEPGKVLLSLVRY
HHHHHEEEECCCCCCHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHCCHHHHHHHHHHH
ARPIAERAGDVAPASTQ
HHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8969501; 9384377 [H]