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The map label for this gene is ycdB [C]

Identifier: 108761662

GI number: 108761662

Start: 2017349

End: 2018662

Strand: Reverse

Name: ycdB [C]

Synonym: MXAN_1701

Alternate gene names: 108761662

Gene position: 2018662-2017349 (Counterclockwise)

Preceding gene: 108759950

Following gene: 108757884

Centisome position: 22.09

GC content: 67.35

Gene sequence:

>1314_bases
ATGCTCGAACTGGACGACATCCAGAGCGGAGTGCTGCGGCCCCGCCCTTCTCCGTACGTCGCGACCTATATCCTCCTCCG
CATCGATGACCGGAGCGCGGGGCGGGAGTTGATGGGGCGGCTCTGCTCGGTTGTGGCCACGGCCGCCCATCCGAGCAGCC
CGACCGCCGATTGCTGGCTCAGCGTCGCGCTCACGTATCACGGGCTCGAGGCGCTGGGCGTACCACGAAACTCACTGGAC
AGCTTCGCGTGGGAGTTCCGCCAGGGGATGGCCGCCCGGGCGAAGGCACTGGGGGACGACGGCGAGAGCAGCCCCGAACA
CTGGGAGCCACCGCTGGGAACGAGCGACGTCCATGTCGTGCTGACGGCGCTTTCGCCGACTCAGGCTCAACTCGAAACGG
CGCTGGAGCGCGCGAGCAAGGCGGTGCGGGAACTTGGCGGCATCGAGGCAATCTGGCGTCAGGACTGCCATGCACTGAGC
ACCGGCAAGGAGCCGTTCGGCTTCAAGGACGGCATCAGCCATCCGGCCGTCGAGGGCAGCGGCATTCCAGGAAGCAATCC
CCACGAGGAACCGCTCAAGGCAGGCGAATTCGTACTCGGCTACCCCGACGAAACGGGCGGCGTGTCCCCGATGCCCTGGC
CTGACGTCCTGGGGCGCAATGGGACGTACGTCGCCTTCCGCAAGCTTCATCAGCGGGTGGCCGCGTTCAGGCAGTACCTG
AAGGCCACCGCGAGCAGCCGGGAGGACGAGGAGTTTCTGGCGGCGAAGATGATGGGGAGGTGGCGGAGCGGCGCGCCGCT
GGCGCTGTGCCCACACCACGACGCTCCCGACCTTGGCGCCGATTCGTCACGGAACAACGCCTTCCTCTATTCAGATGACC
CGACCGGATACAAGACGCCTCCCGCGTCACACGTCCGGCGAGCGAATCCCCGCGACGCGTCCGTCGCCGGCGTGGTCAGA
CTCCATCGGATGATCCGGCGCGGAACCGCCTATGGGCCCGAACTGCCCGAGGGCATCCTCGAGGACGACGGCGCCGAGCG
AGGGTTGATGTTTGCCTTCATCGGCGCGCACCTCGGACGGCAGTTCGAGTTCGTGCAATCGGAGTGGGTCAACGGCGGTG
ACTTTCTCGGGCTGGGCGATGCGAAGGACCCCCTCGTCGGCGCGAACGATGGGACGGGCGTGTTCTCAGTTCCAAAGCGT
CCCATCCCCAGGCGCATGCAAGGCCTCCCTCGGTTCGTGGTCACCCGTGGAGGCGAGTACTGCTTCATGCCCGGGCTCCG
GGCGCTGCGGTGGCTGGCGGACCTCCGGACATGA

Upstream 100 bases:

>100_bases
GGCGACGTGCTGGTCGCCGACTCCACCATCTTCAGCACCTTGTTCGGGGCGGATGAGAGCCTCGTGCGTTTCTGGAAGAA
CCTCGCCACGGCCCACTGAG

Downstream 100 bases:

>100_bases
ACGGCTCGGAGAGCATGGACGCCGTGGTCATGGGTGCGTCCAGGCGAGTCACTTCGAGGAGGACACGGGGTCGACGGTGG
TGTCCTGGCGCGGCGCTTGG

Product: dyp-type peroxidase family protein

Products: NA

Alternate protein names: Dyp-Type Peroxidase Family Protein; Dyp-Type Peroxidase Family; Cytochrome; Dyp-Type Peroxidase; Iron-Dependent Peroxidase-Like Protein; Peroxidase Family Protein; Iron-Dependent Peroxidase; Peroxidase Protein; Peroxidase-Like Protein

Number of amino acids: Translated: 437; Mature: 437

Protein sequence:

>437_residues
MLELDDIQSGVLRPRPSPYVATYILLRIDDRSAGRELMGRLCSVVATAAHPSSPTADCWLSVALTYHGLEALGVPRNSLD
SFAWEFRQGMAARAKALGDDGESSPEHWEPPLGTSDVHVVLTALSPTQAQLETALERASKAVRELGGIEAIWRQDCHALS
TGKEPFGFKDGISHPAVEGSGIPGSNPHEEPLKAGEFVLGYPDETGGVSPMPWPDVLGRNGTYVAFRKLHQRVAAFRQYL
KATASSREDEEFLAAKMMGRWRSGAPLALCPHHDAPDLGADSSRNNAFLYSDDPTGYKTPPASHVRRANPRDASVAGVVR
LHRMIRRGTAYGPELPEGILEDDGAERGLMFAFIGAHLGRQFEFVQSEWVNGGDFLGLGDAKDPLVGANDGTGVFSVPKR
PIPRRMQGLPRFVVTRGGEYCFMPGLRALRWLADLRT

Sequences:

>Translated_437_residues
MLELDDIQSGVLRPRPSPYVATYILLRIDDRSAGRELMGRLCSVVATAAHPSSPTADCWLSVALTYHGLEALGVPRNSLD
SFAWEFRQGMAARAKALGDDGESSPEHWEPPLGTSDVHVVLTALSPTQAQLETALERASKAVRELGGIEAIWRQDCHALS
TGKEPFGFKDGISHPAVEGSGIPGSNPHEEPLKAGEFVLGYPDETGGVSPMPWPDVLGRNGTYVAFRKLHQRVAAFRQYL
KATASSREDEEFLAAKMMGRWRSGAPLALCPHHDAPDLGADSSRNNAFLYSDDPTGYKTPPASHVRRANPRDASVAGVVR
LHRMIRRGTAYGPELPEGILEDDGAERGLMFAFIGAHLGRQFEFVQSEWVNGGDFLGLGDAKDPLVGANDGTGVFSVPKR
PIPRRMQGLPRFVVTRGGEYCFMPGLRALRWLADLRT
>Mature_437_residues
MLELDDIQSGVLRPRPSPYVATYILLRIDDRSAGRELMGRLCSVVATAAHPSSPTADCWLSVALTYHGLEALGVPRNSLD
SFAWEFRQGMAARAKALGDDGESSPEHWEPPLGTSDVHVVLTALSPTQAQLETALERASKAVRELGGIEAIWRQDCHALS
TGKEPFGFKDGISHPAVEGSGIPGSNPHEEPLKAGEFVLGYPDETGGVSPMPWPDVLGRNGTYVAFRKLHQRVAAFRQYL
KATASSREDEEFLAAKMMGRWRSGAPLALCPHHDAPDLGADSSRNNAFLYSDDPTGYKTPPASHVRRANPRDASVAGVVR
LHRMIRRGTAYGPELPEGILEDDGAERGLMFAFIGAHLGRQFEFVQSEWVNGGDFLGLGDAKDPLVGANDGTGVFSVPKR
PIPRRMQGLPRFVVTRGGEYCFMPGLRALRWLADLRT

Specific function: Unknown

COG id: COG2837

COG function: function code P; Predicted iron-dependent peroxidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47557; Mature: 47557

Theoretical pI: Translated: 6.58; Mature: 6.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLELDDIQSGVLRPRPSPYVATYILLRIDDRSAGRELMGRLCSVVATAAHPSSPTADCWL
CCCHHHHHHCCCCCCCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
SVALTYHGLEALGVPRNSLDSFAWEFRQGMAARAKALGDDGESSPEHWEPPLGTSDVHVV
HHHHHHHCHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEE
LTALSPTQAQLETALERASKAVRELGGIEAIWRQDCHALSTGKEPFGFKDGISHPAVEGS
EEECCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
GIPGSNPHEEPLKAGEFVLGYPDETGGVSPMPWPDVLGRNGTYVAFRKLHQRVAAFRQYL
CCCCCCCCCCHHCCCCEEEECCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHH
KATASSREDEEFLAAKMMGRWRSGAPLALCPHHDAPDLGADSSRNNAFLYSDDPTGYKTP
HHHHCCCCHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCCCEEEECCCCCCCCCC
PASHVRRANPRDASVAGVVRLHRMIRRGTAYGPELPEGILEDDGAERGLMFAFIGAHLGR
CHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHCH
QFEFVQSEWVNGGDFLGLGDAKDPLVGANDGTGVFSVPKRPIPRRMQGLPRFVVTRGGEY
HHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCEEECCCCCCCHHHHCCCEEEECCCCCE
CFMPGLRALRWLADLRT
EECHHHHHHHHHHHHCC
>Mature Secondary Structure
MLELDDIQSGVLRPRPSPYVATYILLRIDDRSAGRELMGRLCSVVATAAHPSSPTADCWL
CCCHHHHHHCCCCCCCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
SVALTYHGLEALGVPRNSLDSFAWEFRQGMAARAKALGDDGESSPEHWEPPLGTSDVHVV
HHHHHHHCHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEE
LTALSPTQAQLETALERASKAVRELGGIEAIWRQDCHALSTGKEPFGFKDGISHPAVEGS
EEECCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
GIPGSNPHEEPLKAGEFVLGYPDETGGVSPMPWPDVLGRNGTYVAFRKLHQRVAAFRQYL
CCCCCCCCCCHHCCCCEEEECCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHH
KATASSREDEEFLAAKMMGRWRSGAPLALCPHHDAPDLGADSSRNNAFLYSDDPTGYKTP
HHHHCCCCHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCCCEEEECCCCCCCCCC
PASHVRRANPRDASVAGVVRLHRMIRRGTAYGPELPEGILEDDGAERGLMFAFIGAHLGR
CHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHCH
QFEFVQSEWVNGGDFLGLGDAKDPLVGANDGTGVFSVPKRPIPRRMQGLPRFVVTRGGEY
HHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCEEECCCCCCCHHHHCCCEEEECCCCCE
CFMPGLRALRWLADLRT
EECHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA