Click here to switch to the map view.

The map label for this gene is 108757811

Identifier: 108757811

GI number: 108757811

Start: 5867419

End: 5867787

Strand: Reverse

Name: 108757811

Synonym: MXAN_4681

Alternate gene names: NA

Gene position: 5867787-5867419 (Counterclockwise)

Preceding gene: 108756781

Following gene: 108761771

Centisome position: 64.2

GC content: 68.83

Gene sequence:

>369_bases
GTGAGCCGAAGGCGCCTGCCGGTCCTCGACGCGAATGAGCCGCCGCTCCCGCCCGAAGGGCCGGAGCCGCCGCCTTCCGA
GGATGAGGCTGTAGAAATTCCCATTGATGGGAACCTGGACCTGCACCTCTTCCACCCGCGCGACGTGAAGGACCTGGTGG
TGGAGTACCTCTGGGCGTGCCGGCAGAAGTGCGTCCTGGACGTGCGCATCATCCACGGCAAGGGCACCGGCGCGCTGAGG
CGCACGGTGCAGTCGCTGCTTCCCAGGCTGCCAGAGGTGGAGTCGTTCCGTTCCGCGGGCGAAGGGGACGGAGGCTGGGG
CGCGACGTGGGTGCGCCTGCGCCCAGCGGACTACGACAGCCAGAAGTAG

Upstream 100 bases:

>100_bases
TCCGCGCTGAAGGGCGAAGTCTCATCGCTGTCCGAGCGCTTCAAGGCCGCCCGCGAGCGGCGCCGCTTGCAGGCGGAGAA
GGAGAAGCAGGAGTGGGAGC

Downstream 100 bases:

>100_bases
GCGGAGGCGATGAGGGCGCGCTTCTCCATCACCTTCGCCTTGTTGGCCAGCTCCGCCAACTGCCGGTCCTTGGAGGCGTA
CCGCTTCTCCTCCTCGTTGC

Product: Smr domain-containing protein

Products: NA

Alternate protein names: Smr Protein/MutS2-Like; Smr Domain Protein

Number of amino acids: Translated: 122; Mature: 121

Protein sequence:

>122_residues
MSRRRLPVLDANEPPLPPEGPEPPPSEDEAVEIPIDGNLDLHLFHPRDVKDLVVEYLWACRQKCVLDVRIIHGKGTGALR
RTVQSLLPRLPEVESFRSAGEGDGGWGATWVRLRPADYDSQK

Sequences:

>Translated_122_residues
MSRRRLPVLDANEPPLPPEGPEPPPSEDEAVEIPIDGNLDLHLFHPRDVKDLVVEYLWACRQKCVLDVRIIHGKGTGALR
RTVQSLLPRLPEVESFRSAGEGDGGWGATWVRLRPADYDSQK
>Mature_121_residues
SRRRLPVLDANEPPLPPEGPEPPPSEDEAVEIPIDGNLDLHLFHPRDVKDLVVEYLWACRQKCVLDVRIIHGKGTGALRR
TVQSLLPRLPEVESFRSAGEGDGGWGATWVRLRPADYDSQK

Specific function: Unknown

COG id: COG1193

COG function: function code L; Mismatch repair ATPase (MutS family)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13670; Mature: 13538

Theoretical pI: Translated: 5.23; Mature: 5.23

Prosite motif: PS50828 SMR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRRRLPVLDANEPPLPPEGPEPPPSEDEAVEIPIDGNLDLHLFHPRDVKDLVVEYLWAC
CCCCCCCEECCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEECCCCHHHHHHHHHHHH
RQKCVLDVRIIHGKGTGALRRTVQSLLPRLPEVESFRSAGEGDGGWGATWVRLRPADYDS
HHHCEEEEEEEECCCCHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCEEEEEEECCCCCC
QK
CC
>Mature Secondary Structure 
SRRRLPVLDANEPPLPPEGPEPPPSEDEAVEIPIDGNLDLHLFHPRDVKDLVVEYLWAC
CCCCCCEECCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEECCCCHHHHHHHHHHHH
RQKCVLDVRIIHGKGTGALRRTVQSLLPRLPEVESFRSAGEGDGGWGATWVRLRPADYDS
HHHCEEEEEEEECCCCHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCEEEEEEECCCCCC
QK
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA