| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is yhhW [C]
Identifier: 108757780
GI number: 108757780
Start: 6057594
End: 6058502
Strand: Reverse
Name: yhhW [C]
Synonym: MXAN_4840
Alternate gene names: 108757780
Gene position: 6058502-6057594 (Counterclockwise)
Preceding gene: 108757059
Following gene: 108761318
Centisome position: 66.29
GC content: 68.65
Gene sequence:
>909_bases GTGGCCGCCTCGGCCATCGGGTGTCGGCGCTCGGATGCTCCCGCGGTCATCCTGAAGTCGCAGCGCAACGTAATGCAGAC GCTTGAGGGCATCCCCGCGACGGACGGAGCCGGCGTTCGCTTGACGCGGGTCATCGGGCAGCCCTCGCTGCGGAACCTCG ACCCGTTCCTCATGCTCGACCGGTTCCACTCCGATGACCCCGGCGCCTACATCAACGGCTTCCCGAATCACCCCCACCGG GGCTTCGAGACCGTCACGGTCATGCTCGATGGGCGAATGCGCCACCGGGACAGCCGTGGCAACAGCGGGCTCATCGCCGG AGGTGGCTCGCAGTGGATGACCGCGGGCCGTGGCCTCATCCACTCGGAGATGCCGGAGCAGGTGCAGGGGTTGATGTCCG GCTTCCAGCTCTGGCTCAACCTCCCCGCGAAGGAGAAGATGTGCCCGCCGGCCTACCAGGACCACACGCCAGCGCAACTC GCGGAGGAGCGCCTGTCTCCCTCGGGGAGCCGCGCGCGTGTCATCGCGGGCCACATGAACGGGCTCCAGGGCCCCGTGCG TGAGCGCCCCACGCAGCCGCTCTTGCTGACCCTGGCGCTCGAGGACGACCGTCCTTTCGAACTCGACACACCGTCGGACC ACACTGCCTTCGCCTTCGTGTCCACGGGCGAGGTCGACCTGGGTCCTGAAGACACGTCGAAGCCGGTGCGCGAGGGCTCG CTGGCATTGCTCGGCCCGGGGAGTCGGCTTCGCGTGCGCGCGAGGAATCGCCGGAGCGAGTTGCTCATCGCCGCGGCGAT GCCCCTGCGTGAGCCCATCGTCCAGTACGGCCCGTTCGTCATGAACACCCGCGAGGAGATCCAGCAGGCCTTTGACGACT ATCGCGCGGGCGTGCTCGACCAGGGGTGA
Upstream 100 bases:
>100_bases GGCTCCCGGAGGAGGCTCGGGGGACGCACACCCGGTTTCCGGCAAGGTCTTCATGAACGCCACCTCGCGCCGCCGTTTCC TCCTTCAGTCGGGTCTTCTC
Downstream 100 bases:
>100_bases TGGTCGTCAATCCACGGCCGACCGGCCACAGAAGTCCAGCACCTCCTCGAAGGGCCAGCCCTCCAGTGCGCCAAACAACT TGTGGCCGCCGAGCTTCGCC
Product: pirin family protein
Products: NA
Alternate protein names: Putative quercetinase; Pirin-like protein PA3240 [H]
Number of amino acids: Translated: 302; Mature: 301
Protein sequence:
>302_residues MAASAIGCRRSDAPAVILKSQRNVMQTLEGIPATDGAGVRLTRVIGQPSLRNLDPFLMLDRFHSDDPGAYINGFPNHPHR GFETVTVMLDGRMRHRDSRGNSGLIAGGGSQWMTAGRGLIHSEMPEQVQGLMSGFQLWLNLPAKEKMCPPAYQDHTPAQL AEERLSPSGSRARVIAGHMNGLQGPVRERPTQPLLLTLALEDDRPFELDTPSDHTAFAFVSTGEVDLGPEDTSKPVREGS LALLGPGSRLRVRARNRRSELLIAAAMPLREPIVQYGPFVMNTREEIQQAFDDYRAGVLDQG
Sequences:
>Translated_302_residues MAASAIGCRRSDAPAVILKSQRNVMQTLEGIPATDGAGVRLTRVIGQPSLRNLDPFLMLDRFHSDDPGAYINGFPNHPHR GFETVTVMLDGRMRHRDSRGNSGLIAGGGSQWMTAGRGLIHSEMPEQVQGLMSGFQLWLNLPAKEKMCPPAYQDHTPAQL AEERLSPSGSRARVIAGHMNGLQGPVRERPTQPLLLTLALEDDRPFELDTPSDHTAFAFVSTGEVDLGPEDTSKPVREGS LALLGPGSRLRVRARNRRSELLIAAAMPLREPIVQYGPFVMNTREEIQQAFDDYRAGVLDQG >Mature_301_residues AASAIGCRRSDAPAVILKSQRNVMQTLEGIPATDGAGVRLTRVIGQPSLRNLDPFLMLDRFHSDDPGAYINGFPNHPHRG FETVTVMLDGRMRHRDSRGNSGLIAGGGSQWMTAGRGLIHSEMPEQVQGLMSGFQLWLNLPAKEKMCPPAYQDHTPAQLA EERLSPSGSRARVIAGHMNGLQGPVRERPTQPLLLTLALEDDRPFELDTPSDHTAFAFVSTGEVDLGPEDTSKPVREGSL ALLGPGSRLRVRARNRRSELLIAAAMPLREPIVQYGPFVMNTREEIQQAFDDYRAGVLDQG
Specific function: Putative quercetin 2,3-dioxygenase [H]
COG id: COG1741
COG function: function code R; Pirin-related protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pirin family [H]
Homologues:
Organism=Homo sapiens, GI66363697, Length=280, Percent_Identity=40, Blast_Score=202, Evalue=4e-52, Organism=Homo sapiens, GI4505823, Length=280, Percent_Identity=40, Blast_Score=202, Evalue=4e-52,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011051 - InterPro: IPR012093 - InterPro: IPR008778 - InterPro: IPR003829 - InterPro: IPR014710 [H]
Pfam domain/function: PF02678 Pirin; PF05726 Pirin_C [H]
EC number: =1.13.11.24 [H]
Molecular weight: Translated: 33063; Mature: 32932
Theoretical pI: Translated: 6.96; Mature: 6.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAASAIGCRRSDAPAVILKSQRNVMQTLEGIPATDGAGVRLTRVIGQPSLRNLDPFLMLD CCCCCCCCCCCCCCEEEEHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCHHEEEH RFHSDDPGAYINGFPNHPHRGFETVTVMLDGRMRHRDSRGNSGLIAGGGSQWMTAGRGLI HHCCCCCCCEECCCCCCCCCCCEEEEEEECCHHHHCCCCCCCCEEECCCHHHHHHCCCCH HSEMPEQVQGLMSGFQLWLNLPAKEKMCPPAYQDHTPAQLAEERLSPSGSRARVIAGHMN HHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCEEEEEECCC GLQGPVRERPTQPLLLTLALEDDRPFELDTPSDHTAFAFVSTGEVDLGPEDTSKPVREGS CCCCCHHHCCCCCEEEEEEECCCCCEECCCCCCCEEEEEEECCCEECCCCCCCCHHHCCC LALLGPGSRLRVRARNRRSELLIAAAMPLREPIVQYGPFVMNTREEIQQAFDDYRAGVLD EEEECCCCEEEEEECCCCCEEEEEECCCHHHHHHHHCCEEECCHHHHHHHHHHHHCCCCC QG CC >Mature Secondary Structure AASAIGCRRSDAPAVILKSQRNVMQTLEGIPATDGAGVRLTRVIGQPSLRNLDPFLMLD CCCCCCCCCCCCCEEEEHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCHHEEEH RFHSDDPGAYINGFPNHPHRGFETVTVMLDGRMRHRDSRGNSGLIAGGGSQWMTAGRGLI HHCCCCCCCEECCCCCCCCCCCEEEEEEECCHHHHCCCCCCCCEEECCCHHHHHHCCCCH HSEMPEQVQGLMSGFQLWLNLPAKEKMCPPAYQDHTPAQLAEERLSPSGSRARVIAGHMN HHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCEEEEEECCC GLQGPVRERPTQPLLLTLALEDDRPFELDTPSDHTAFAFVSTGEVDLGPEDTSKPVREGS CCCCCHHHCCCCCEEEEEEECCCCCEECCCCCCCEEEEEEECCCEECCCCCCCCHHHCCC LALLGPGSRLRVRARNRRSELLIAAAMPLREPIVQYGPFVMNTREEIQQAFDDYRAGVLD EEEECCCCEEEEEECCCCCEEEEEECCCHHHHHHHHCCEEECCHHHHHHHHHHHHCCCCC QG CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]